RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 ZNF560Q96MR9 790 aa22.05■■□□□ 1.12
SQLE-206ENST00000523430 PPP1R10Q96QC0 940 aaKnown RBP22.05■■□□□ 1.12
SQLE-206ENST00000523430 TSPAN18Q96SJ8 248 aa22.05■■□□□ 1.12
SQLE-206ENST00000523430 NT5C1AQ9BXI3 368 aa22.05■■□□□ 1.12
SQLE-206ENST00000523430 FAM124BQ9H5Z6 455 aaPredicted RBP22.05■■□□□ 1.12
SQLE-206ENST00000523430 MRPL47Q9HD33 250 aaKnown RBP22.05■■□□□ 1.12
SQLE-206ENST00000523430 PARVAQ9NVD7 372 aa22.05■■□□□ 1.12
SQLE-206ENST00000523430 TCRBV5S1A1TA0A578 114 aa22.05■■□□□ 1.12
SQLE-206ENST00000523430 CCDC151A5D8V7 595 aa22.05■■□□□ 1.12
SQLE-206ENST00000523430 FGGP02679 453 aa22.05■■□□□ 1.12
SQLE-206ENST00000523430 VDRP11473 427 aa22.05■■□□□ 1.12
SQLE-206ENST00000523430 CTNNA2P26232 953 aa22.05■■□□□ 1.12
SQLE-206ENST00000523430 AFF1P51825 1210 aaKnown RBP22.05■■□□□ 1.12
SQLE-206ENST00000523430 BRD3Q15059 726 aa22.05■■□□□ 1.12
SQLE-206ENST00000523430 SOWAHAQ2M3V2 549 aa22.05■■□□□ 1.12
SQLE-206ENST00000523430 SGO2Q562F6 1265 aa22.05■■□□□ 1.12
SQLE-206ENST00000523430 C8orf74Q6P047 294 aa22.05■■□□□ 1.12
SQLE-206ENST00000523430 WDR93Q6P2C0 686 aa22.05■■□□□ 1.12
SQLE-206ENST00000523430 TMCO3Q6UWJ1 677 aa22.05■■□□□ 1.12
SQLE-206ENST00000523430 ERICH1Q86X53 443 aa22.05■■□□□ 1.12
SQLE-206ENST00000523430 C12orf29Q8N999 325 aa22.05■■□□□ 1.12
SQLE-206ENST00000523430 SH3TC2Q8TF17 1288 aa22.05■■□□□ 1.12
SQLE-206ENST00000523430 KRT12Q99456 494 aa22.05■■□□□ 1.12
SQLE-206ENST00000523430 TRPV6Q9H1D0 765 aa22.05■■□□□ 1.12
SQLE-206ENST00000523430 SAGE1Q9NXZ1 904 aa22.05■■□□□ 1.12
SQLE-206ENST00000523430 CACNG4Q9UBN1 327 aa22.05■■□□□ 1.12
SQLE-206ENST00000523430 MYO1FO00160 1098 aa22.04■■□□□ 1.12
SQLE-206ENST00000523430 HCRTO43612 131 aa22.04■■□□□ 1.12
SQLE-206ENST00000523430 ITGA4P13612 1032 aa22.04■■□□□ 1.12
SQLE-206ENST00000523430 RPL7AP62424 266 aaKnown RBP22.04■■□□□ 1.12
SQLE-206ENST00000523430 SLC7A5Q01650 507 aa22.04■■□□□ 1.12
SQLE-206ENST00000523430 ZNF618Q5T7W0 954 aa22.04■■□□□ 1.12
SQLE-206ENST00000523430 DNAJC24Q6P3W2 148 aa22.04■■□□□ 1.12
SQLE-206ENST00000523430 TTC39CQ8N584 583 aa22.04■■□□□ 1.12
SQLE-206ENST00000523430 GSTCDQ8NEC7 633 aa22.04■■□□□ 1.12
SQLE-206ENST00000523430 GAD1Q99259 594 aa22.04■■□□□ 1.12
SQLE-206ENST00000523430 HINFPQ9BQA5 517 aa22.04■■□□□ 1.12
SQLE-206ENST00000523430 TTC7AQ9ULT0 858 aaPredicted RBP22.04■■□□□ 1.12
SQLE-206ENST00000523430 TRIM17Q9Y577 477 aa22.04■■□□□ 1.12
SQLE-206ENST00000523430 CCDC66A2RUB6 948 aa22.03■■□□□ 1.12
SQLE-206ENST00000523430 KPNA7A9QM74 516 aa22.03■■□□□ 1.12
SQLE-206ENST00000523430 PROSCO94903 275 aa22.03■■□□□ 1.12
SQLE-206ENST00000523430 CCDC70Q6NSX1 233 aa22.03■■□□□ 1.12
SQLE-206ENST00000523430 KLHL7Q8IXQ5 586 aa22.03■■□□□ 1.12
SQLE-206ENST00000523430 FEZF2Q8TBJ5 459 aa22.03■■□□□ 1.12
SQLE-206ENST00000523430 KBTBD7Q8WVZ9 684 aa22.03■■□□□ 1.12
SQLE-206ENST00000523430 MCEEQ96PE7 176 aa22.03■■□□□ 1.12
SQLE-206ENST00000523430 CPXM1Q96SM3 734 aa22.03■■□□□ 1.12
SQLE-206ENST00000523430 TSEN34Q9BSV6 310 aaKnown RBP22.03■■□□□ 1.12
SQLE-206ENST00000523430 DMGDHQ9UI17 866 aaKnown RBP22.03■■□□□ 1.12
SQLE-206ENST00000523430 PCDHA3Q9Y5H8 950 aa22.03■■□□□ 1.12
SQLE-206ENST00000523430 KRIT1O00522 736 aa22.03■■□□□ 1.12
SQLE-206ENST00000523430 TAF6P49848 677 aa22.03■■□□□ 1.12
SQLE-206ENST00000523430 FAM26DQ5JW98 314 aa22.03■■□□□ 1.12
SQLE-206ENST00000523430 ACOT1Q86TX2 421 aa22.03■■□□□ 1.12
SQLE-206ENST00000523430 DPEP3Q9H4B8 488 aa22.03■■□□□ 1.12
SQLE-206ENST00000523430 TSPAN16Q9UKR8 245 aa22.03■■□□□ 1.12
SQLE-206ENST00000523430 ERBB2P04626 1255 aa22.02■■□□□ 1.12
SQLE-206ENST00000523430 FGFR1P11362 822 aa22.02■■□□□ 1.12
SQLE-206ENST00000523430 IBSPP21815 317 aaPredicted RBP22.02■■□□□ 1.12
SQLE-206ENST00000523430 PNPLA4P41247 253 aa22.02■■□□□ 1.12
SQLE-206ENST00000523430 PRMT2P55345 433 aa22.02■■□□□ 1.12
SQLE-206ENST00000523430 ARHGEF6Q15052 776 aa22.02■■□□□ 1.12
SQLE-206ENST00000523430 CNGA2Q16280 664 aa22.02■■□□□ 1.12
SQLE-206ENST00000523430 LONRF2Q1L5Z9 754 aa22.02■■□□□ 1.12
SQLE-206ENST00000523430 PPP1R15BQ5SWA1 713 aa22.02■■□□□ 1.12
SQLE-206ENST00000523430 AGMOQ6ZNB7 445 aa22.02■■□□□ 1.12
SQLE-206ENST00000523430 HACE1Q8IYU2 909 aa22.02■■□□□ 1.12
SQLE-206ENST00000523430 UBA3Q8TBC4 463 aa22.02■■□□□ 1.12
SQLE-206ENST00000523430 PLEKHA4Q9H4M7 779 aa22.02■■□□□ 1.12
SQLE-206ENST00000523430 STARD7Q9NQZ5 370 aa22.02■■□□□ 1.12
SQLE-206ENST00000523430 ZRANB2O95218 330 aaKnown RBP eCLIP22.01■■□□□ 1.11
SQLE-206ENST00000523430 PYGMP11217 842 aa22.01■■□□□ 1.11
SQLE-206ENST00000523430 IGFBP6P24592 240 aaPredicted RBP22.01■■□□□ 1.11
SQLE-206ENST00000523430 LRPAP1P30533 357 aa22.01■■□□□ 1.11
SQLE-206ENST00000523430 SLC1A1P43005 524 aa22.01■■□□□ 1.11
SQLE-206ENST00000523430 ZNF252P-AS1Q0IIN9 211 aa22.01■■□□□ 1.11
SQLE-206ENST00000523430 PDCLQ13371 301 aa22.01■■□□□ 1.11
SQLE-206ENST00000523430 DSC3Q14574 896 aa22.01■■□□□ 1.11
SQLE-206ENST00000523430 GOLGA7BQ2TAP0 167 aa22.01■■□□□ 1.11
SQLE-206ENST00000523430 SV2CQ496J9 727 aa22.01■■□□□ 1.11
SQLE-206ENST00000523430 ADAT2Q7Z6V5 191 aaKnown RBP22.01■■□□□ 1.11
SQLE-206ENST00000523430 GSPT2Q8IYD1 628 aaKnown RBP22.01■■□□□ 1.11
SQLE-206ENST00000523430 C3orf20Q8ND61 904 aa22.01■■□□□ 1.11
SQLE-206ENST00000523430 OR6B3Q8NGW1 331 aa22.01■■□□□ 1.11
SQLE-206ENST00000523430 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.01■■□□□ 1.113e-6■■□□□ 14.1
SQLE-206ENST00000523430 ARFGAP3Q9NP61 516 aa22.01■■□□□ 1.11
SQLE-206ENST00000523430 FAM49BQ9NUQ9 324 aa22.01■■□□□ 1.11
SQLE-206ENST00000523430 GDAP2Q9NXN4 497 aa22.01■■□□□ 1.11
SQLE-206ENST00000523430 L1RE1Q9UN81 338 aa22.01■■□□□ 1.11
SQLE-206ENST00000523430 NR2E1Q9Y466 385 aa22.01■■□□□ 1.11
SQLE-206ENST00000523430 TMEM191CA6NGB0 347 aa22■■□□□ 1.11
SQLE-206ENST00000523430 ARL5CA6NH57 179 aa22■■□□□ 1.11
SQLE-206ENST00000523430 CKBP12277 381 aa22■■□□□ 1.11
SQLE-206ENST00000523430 GPD2P43304 727 aa22■■□□□ 1.11
SQLE-206ENST00000523430 TRAF7Q6Q0C0 670 aa22■■□□□ 1.11
SQLE-206ENST00000523430 LCLAT1Q6UWP7 414 aa22■■□□□ 1.11
SQLE-206ENST00000523430 LPIN3Q9BQK8 851 aa22■■□□□ 1.11
SQLE-206ENST00000523430 DDX47Q9H0S4 455 aaKnown RBP22■■□□□ 1.11
SQLE-206ENST00000523430 MIOSQ9NXC5 875 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms