RNA–Protein interactions for RNA: ENST00000523417.5

TOP1MT-217, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 698 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-217ENST00000523417 HOXA6P31267 233 aa13.63□□□□□ -0.23
TOP1MT-217ENST00000523417 PLCB2Q00722 1185 aa13.63□□□□□ -0.23
TOP1MT-217ENST00000523417 PPP2R5DQ14738 602 aa13.63□□□□□ -0.23
TOP1MT-217ENST00000523417 VEPH1Q14D04 833 aa13.63□□□□□ -0.23
TOP1MT-217ENST00000523417 NFE2Q16621 373 aaPredicted RBP13.63□□□□□ -0.23
TOP1MT-217ENST00000523417 DGKKQ5KSL6 1271 aa13.63□□□□□ -0.23
TOP1MT-217ENST00000523417 DPH6Q7L8W6 267 aa13.63□□□□□ -0.23
TOP1MT-217ENST00000523417 YAF2Q8IY57 180 aa13.63□□□□□ -0.23
TOP1MT-217ENST00000523417 SYNPOQ8N3V7 929 aa13.63□□□□□ -0.23
TOP1MT-217ENST00000523417 SPEM1Q8N4L4 309 aa13.63□□□□□ -0.23
TOP1MT-217ENST00000523417 C1orf127Q8N9H9 656 aa13.63□□□□□ -0.23
TOP1MT-217ENST00000523417 LINC00301Q8NCQ3 95 aa13.63□□□□□ -0.23
TOP1MT-217ENST00000523417 CSGALNACT1Q8TDX6 532 aa13.63□□□□□ -0.23
TOP1MT-217ENST00000523417 LEO1Q8WVC0 666 aaPredicted RBP13.63□□□□□ -0.23
TOP1MT-217ENST00000523417 ZNF560Q96MR9 790 aa13.63□□□□□ -0.23
TOP1MT-217ENST00000523417 FAM213AQ9BRX8 229 aa13.63□□□□□ -0.23
TOP1MT-217ENST00000523417 SLC46A2Q9BY10 475 aa13.63□□□□□ -0.23
TOP1MT-217ENST00000523417 SLITRK6Q9H5Y7 841 aa13.63□□□□□ -0.23
TOP1MT-217ENST00000523417 ABCB6Q9NP58 842 aa13.63□□□□□ -0.23
TOP1MT-217ENST00000523417 PANK4Q9NVE7 773 aa13.63□□□□□ -0.23
TOP1MT-217ENST00000523417 ITGA11Q9UKX5 1188 aa13.63□□□□□ -0.23
TOP1MT-217ENST00000523417 A0A087X0B3 334 aa13.62□□□□□ -0.23
TOP1MT-217ENST00000523417 GABRDO14764 452 aa13.62□□□□□ -0.23
TOP1MT-217ENST00000523417 STX6O43752 255 aa13.62□□□□□ -0.23
TOP1MT-217ENST00000523417 PPP6R2O75170 966 aa13.62□□□□□ -0.23
TOP1MT-217ENST00000523417 SOAT2O75908 522 aa13.62□□□□□ -0.23
TOP1MT-217ENST00000523417 F11P03951 625 aa13.62□□□□□ -0.23
TOP1MT-217ENST00000523417 FAM163BP0C2L3 166 aa13.62□□□□□ -0.23
TOP1MT-217ENST00000523417 HMGA1P17096 107 aaKnown RBP13.62□□□□□ -0.23
TOP1MT-217ENST00000523417 CCNE1P24864 410 aa13.62□□□□□ -0.23
TOP1MT-217ENST00000523417 DDX6P26196 483 aaKnown RBP eCLIP13.62□□□□□ -0.23
TOP1MT-217ENST00000523417 CCR3P51677 355 aa13.62□□□□□ -0.23
TOP1MT-217ENST00000523417 CASP5P51878 434 aa13.62□□□□□ -0.23
TOP1MT-217ENST00000523417 WNT7BP56706 349 aa13.62□□□□□ -0.23
TOP1MT-217ENST00000523417 RBP5P82980 135 aa13.62□□□□□ -0.23
TOP1MT-217ENST00000523417 MGAT5BQ3V5L5 792 aa13.62□□□□□ -0.23
TOP1MT-217ENST00000523417 STXBP5Q5T5C0 1151 aa13.62□□□□□ -0.23
TOP1MT-217ENST00000523417 GPR158Q5T848 1215 aa13.62□□□□□ -0.23
TOP1MT-217ENST00000523417 TMEM150AQ86TG1 271 aa13.62□□□□□ -0.23
TOP1MT-217ENST00000523417 CELF5Q8N6W0 485 aaKnown RBP13.62□□□□□ -0.23
TOP1MT-217ENST00000523417 MYRFLQ96LU7 910 aa13.62□□□□□ -0.23
TOP1MT-217ENST00000523417 PKMYT1Q99640 499 aa13.62□□□□□ -0.23
TOP1MT-217ENST00000523417 SEPT5Q99719 369 aaPredicted RBP13.62□□□□□ -0.23
TOP1MT-217ENST00000523417 BACH2Q9BYV9 841 aa13.62□□□□□ -0.23
TOP1MT-217ENST00000523417 PANK2Q9BZ23 570 aa13.62□□□□□ -0.23
TOP1MT-217ENST00000523417 TNMDQ9H2S6 317 aa13.62□□□□□ -0.23
TOP1MT-217ENST00000523417 CUEDC2Q9H467 287 aa13.62□□□□□ -0.23
TOP1MT-217ENST00000523417 KBTBD4Q9NVX7 518 aa13.62□□□□□ -0.23
TOP1MT-217ENST00000523417 DLL3Q9NYJ7 618 aa13.62□□□□□ -0.23
TOP1MT-217ENST00000523417 NDRG2Q9UN36 371 aaKnown RBP13.62□□□□□ -0.23
TOP1MT-217ENST00000523417 AGAP1Q9UPQ3 857 aa13.62□□□□□ -0.23
TOP1MT-217ENST00000523417 PCDHB5Q9Y5E4 795 aa13.62□□□□□ -0.23
TOP1MT-217ENST00000523417 COL4A3Q01955 1670 aa13.61□□□□□ -0.23
TOP1MT-217ENST00000523417 DPYSL4O14531 572 aa13.61□□□□□ -0.23
TOP1MT-217ENST00000523417 GCNT3O95395 438 aa13.61□□□□□ -0.23
TOP1MT-217ENST00000523417 CSH1P0DML2 217 aa13.61□□□□□ -0.23
TOP1MT-217ENST00000523417 CSH2P0DML3 217 aa13.61□□□□□ -0.23
TOP1MT-217ENST00000523417 IDEP14735 1019 aa13.61□□□□□ -0.23
TOP1MT-217ENST00000523417 STAT6P42226 847 aa13.61□□□□□ -0.23
TOP1MT-217ENST00000523417 CXCL12P48061 93 aa13.61□□□□□ -0.23
TOP1MT-217ENST00000523417 LHX1P48742 406 aa13.61□□□□□ -0.23
TOP1MT-217ENST00000523417 CEBPZQ03701 1054 aaKnown RBP13.61□□□□□ -0.23
TOP1MT-217ENST00000523417 LRRC32Q14392 662 aa13.61□□□□□ -0.23
TOP1MT-217ENST00000523417 GAS6Q14393 721 aa13.61□□□□□ -0.23
TOP1MT-217ENST00000523417 SURF1Q15526 300 aa13.61□□□□□ -0.23
TOP1MT-217ENST00000523417 E2F4Q16254 413 aa13.61□□□□□ -0.23
TOP1MT-217ENST00000523417 CCDC65Q8IXS2 484 aa13.61□□□□□ -0.23
TOP1MT-217ENST00000523417 KIAA2013Q8IYS2 634 aa13.61□□□□□ -0.23
TOP1MT-217ENST00000523417 SYCP3Q8IZU3 236 aa13.61□□□□□ -0.23
TOP1MT-217ENST00000523417 CMTM8Q8IZV2 173 aa13.61□□□□□ -0.23
TOP1MT-217ENST00000523417 PDCL2Q8N4E4 241 aa13.61□□□□□ -0.23
TOP1MT-217ENST00000523417 CSGALNACT2Q8N6G5 542 aa13.61□□□□□ -0.23
TOP1MT-217ENST00000523417 TOP6BLQ8N6T0 577 aa13.61□□□□□ -0.23
TOP1MT-217ENST00000523417 ZSWIM2Q8NEG5 633 aa13.61□□□□□ -0.23
TOP1MT-217ENST00000523417 BPIFB1Q8TDL5 484 aa13.61□□□□□ -0.23
TOP1MT-217ENST00000523417 RMDN1Q96DB5 314 aa13.61□□□□□ -0.23
TOP1MT-217ENST00000523417 CEP295NLQ96MC4 621 aa13.61□□□□□ -0.23
TOP1MT-217ENST00000523417 LPIN3Q9BQK8 851 aa13.61□□□□□ -0.23
TOP1MT-217ENST00000523417 FAM83CQ9BQN1 747 aa13.61□□□□□ -0.23
TOP1MT-217ENST00000523417 TMLHEQ9NVH6 421 aa13.61□□□□□ -0.23
TOP1MT-217ENST00000523417 THG1LQ9NWX6 298 aaKnown RBP13.61□□□□□ -0.23
TOP1MT-217ENST00000523417 RBAKQ9NYW8 714 aaPredicted RBP13.61□□□□□ -0.23
TOP1MT-217ENST00000523417 TBC1D7Q9P0N9 293 aa13.61□□□□□ -0.23
TOP1MT-217ENST00000523417 SPECC1L-ADORA2AF8WAN1 911 aa13.6□□□□□ -0.23
TOP1MT-217ENST00000523417 K7ELQ4 463 aaPredicted RBP13.6□□□□□ -0.23
TOP1MT-217ENST00000523417 HUS1O60921 280 aa13.6□□□□□ -0.23
TOP1MT-217ENST00000523417 TGM1P22735 817 aa13.6□□□□□ -0.23
TOP1MT-217ENST00000523417 POLR2BP30876 1174 aaKnown RBP13.6□□□□□ -0.23
TOP1MT-217ENST00000523417 CTHP32929 405 aa13.6□□□□□ -0.23
TOP1MT-217ENST00000523417 CNR2P34972 360 aa13.6□□□□□ -0.23
TOP1MT-217ENST00000523417 KPNA1P52294 538 aaPredicted RBP13.6□□□□□ -0.23
TOP1MT-217ENST00000523417 NLRP12P59046 1061 aa13.6□□□□□ -0.23
TOP1MT-217ENST00000523417 SNRPFP62306 86 aaKnown RBP13.6□□□□□ -0.23
TOP1MT-217ENST00000523417 TFAMQ00059 246 aaKnown RBP13.6□□□□□ -0.23
TOP1MT-217ENST00000523417 AMPD3Q01432 767 aa13.6□□□□□ -0.23
TOP1MT-217ENST00000523417 TSPY1Q01534 308 aa13.6□□□□□ -0.23
TOP1MT-217ENST00000523417 ZNF268Q14587 947 aaPredicted RBP13.6□□□□□ -0.23
TOP1MT-217ENST00000523417 PUM1Q14671 1186 aaKnown RBP eCLIP13.6□□□□□ -0.232e-7■□□□□ 8.9
TOP1MT-217ENST00000523417 CFAP221Q4G0U5 840 aa13.6□□□□□ -0.23
TOP1MT-217ENST00000523417 FAM171BQ6P995 826 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms