RNA–Protein interactions for RNA: ENST00000523275.5

CTNNA1-237, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-237ENST00000523275 CDC25CP30307 473 aa12.67□□□□□ -0.38
CTNNA1-237ENST00000523275 POLR2BP30876 1174 aaKnown RBP12.67□□□□□ -0.38
CTNNA1-237ENST00000523275 ID4P47928 161 aa12.67□□□□□ -0.38
CTNNA1-237ENST00000523275 KPNA1P52294 538 aaPredicted RBP12.67□□□□□ -0.38
CTNNA1-237ENST00000523275 WNT7BP56706 349 aa12.67□□□□□ -0.38
CTNNA1-237ENST00000523275 FOXK2Q01167 660 aa12.67□□□□□ -0.38
CTNNA1-237ENST00000523275 C1orf228Q6PIY5 440 aa12.67□□□□□ -0.38
CTNNA1-237ENST00000523275 TSSK4Q6SA08 328 aa12.67□□□□□ -0.38
CTNNA1-237ENST00000523275 CCDC65Q8IXS2 484 aa12.67□□□□□ -0.38
CTNNA1-237ENST00000523275 CSGALNACT2Q8N6G5 542 aa12.67□□□□□ -0.38
CTNNA1-237ENST00000523275 ZBTB44Q8NCP5 570 aa12.67□□□□□ -0.38
CTNNA1-237ENST00000523275 LINC00301Q8NCQ3 95 aa12.67□□□□□ -0.38
CTNNA1-237ENST00000523275 GIPC2Q8TF65 315 aa12.67□□□□□ -0.38
CTNNA1-237ENST00000523275 NELL1Q92832 810 aa12.67□□□□□ -0.38
CTNNA1-237ENST00000523275 LRRC3BQ96PB8 259 aa12.67□□□□□ -0.38
CTNNA1-237ENST00000523275 GCNAQ96QF7 691 aa12.67□□□□□ -0.38
CTNNA1-237ENST00000523275 HINFPQ9BQA5 517 aa12.67□□□□□ -0.38
CTNNA1-237ENST00000523275 LPIN3Q9BQK8 851 aa12.67□□□□□ -0.38
CTNNA1-237ENST00000523275 CBWD1Q9BRT8 395 aa12.67□□□□□ -0.38
CTNNA1-237ENST00000523275 IER2Q9BTL4 223 aa12.67□□□□□ -0.38
CTNNA1-237ENST00000523275 FAM126AQ9BYI3 521 aaPredicted RBP12.67□□□□□ -0.38
CTNNA1-237ENST00000523275 FGFBP2Q9BYJ0 223 aa12.67□□□□□ -0.38
CTNNA1-237ENST00000523275 LRRC27Q9C0I9 530 aa12.67□□□□□ -0.38
CTNNA1-237ENST00000523275 TASP1Q9H6P5 420 aa12.67□□□□□ -0.38
CTNNA1-237ENST00000523275 C8orf33Q9H7E9 229 aaPredicted RBP12.67□□□□□ -0.38
CTNNA1-237ENST00000523275 TMEM206Q9H813 350 aa12.67□□□□□ -0.38
CTNNA1-237ENST00000523275 PRMT8Q9NR22 394 aaPredicted RBP12.67□□□□□ -0.38
CTNNA1-237ENST00000523275 OBP2AQ9NY56 170 aa12.67□□□□□ -0.38
CTNNA1-237ENST00000523275 ABI2Q9NYB9 513 aaPredicted RBP12.67□□□□□ -0.38
CTNNA1-237ENST00000523275 RBAKQ9NYW8 714 aaPredicted RBP12.67□□□□□ -0.38
CTNNA1-237ENST00000523275 PCDHB5Q9Y5E4 795 aa12.67□□□□□ -0.38
CTNNA1-237ENST00000523275 GPR179Q6PRD1 2367 aa12.67□□□□□ -0.38
CTNNA1-237ENST00000523275 OTOGLQ3ZCN5 2332 aa12.67□□□□□ -0.38
CTNNA1-237ENST00000523275 VPS13AQ96RL7 3174 aa12.66□□□□□ -0.38
CTNNA1-237ENST00000523275 SPTLC2O15270 562 aa12.66□□□□□ -0.38
CTNNA1-237ENST00000523275 HUS1O60921 280 aa12.66□□□□□ -0.38
CTNNA1-237ENST00000523275 PRPF6O94906 941 aaKnown RBP12.66□□□□□ -0.38
CTNNA1-237ENST00000523275 ITGB3P05106 788 aa12.66□□□□□ -0.38
CTNNA1-237ENST00000523275 CHRNB1P11230 501 aa12.66□□□□□ -0.38
CTNNA1-237ENST00000523275 RBP5P82980 135 aa12.66□□□□□ -0.38
CTNNA1-237ENST00000523275 TSPY1Q01534 308 aa12.66□□□□□ -0.38
CTNNA1-237ENST00000523275 NFE2Q16621 373 aaPredicted RBP12.66□□□□□ -0.38
CTNNA1-237ENST00000523275 ARHGAP29Q52LW3 1261 aa12.66□□□□□ -0.38
CTNNA1-237ENST00000523275 STXBP4Q6ZWJ1 553 aa12.66□□□□□ -0.38
CTNNA1-237ENST00000523275 KIAA2013Q8IYS2 634 aa12.66□□□□□ -0.38
CTNNA1-237ENST00000523275 PDCL2Q8N4E4 241 aa12.66□□□□□ -0.38
CTNNA1-237ENST00000523275 LRRC52Q8N7C0 313 aa12.66□□□□□ -0.38
CTNNA1-237ENST00000523275 C1orf127Q8N9H9 656 aa12.66□□□□□ -0.38
CTNNA1-237ENST00000523275 NOC3LQ8WTT2 800 aaKnown RBP12.66□□□□□ -0.38
CTNNA1-237ENST00000523275 MSANTD3Q96H12 275 aa12.66□□□□□ -0.38
CTNNA1-237ENST00000523275 ZNF396Q96N95 335 aaPredicted RBP12.66□□□□□ -0.38
CTNNA1-237ENST00000523275 ACBD6Q9BR61 282 aa12.66□□□□□ -0.38
CTNNA1-237ENST00000523275 SLC46A2Q9BY10 475 aa12.66□□□□□ -0.38
CTNNA1-237ENST00000523275 PCIF1Q9H4Z3 704 aa12.66□□□□□ -0.38
CTNNA1-237ENST00000523275 IL21Q9HBE4 155 aa12.66□□□□□ -0.38
CTNNA1-237ENST00000523275 PDE11AQ9HCR9 933 aa12.66□□□□□ -0.38
CTNNA1-237ENST00000523275 TFIP11Q9UBB9 837 aaKnown RBP12.66□□□□□ -0.38
CTNNA1-237ENST00000523275 ZMYM5Q9UJ78 669 aa12.66□□□□□ -0.38
CTNNA1-237ENST00000523275 ITGA11Q9UKX5 1188 aa12.66□□□□□ -0.38
CTNNA1-237ENST00000523275 SCN1AP35498 2009 aa12.66□□□□□ -0.38
CTNNA1-237ENST00000523275 SLC38A8A6NNN8 435 aa12.65□□□□□ -0.38
CTNNA1-237ENST00000523275 KIAA0391O15091 583 aaKnown RBP12.65□□□□□ -0.38
CTNNA1-237ENST00000523275 LILRB5O75023 590 aa12.65□□□□□ -0.38
CTNNA1-237ENST00000523275 PPP6R2O75170 966 aa12.65□□□□□ -0.38
CTNNA1-237ENST00000523275 PRPF40AO75400 957 aaKnown RBP12.65□□□□□ -0.38
CTNNA1-237ENST00000523275 KRT19P08727 400 aa12.65□□□□□ -0.38
CTNNA1-237ENST00000523275 NRLP54845 237 aa12.65□□□□□ -0.38
CTNNA1-237ENST00000523275 CYP4F8P98187 520 aa12.65□□□□□ -0.38
CTNNA1-237ENST00000523275 PLCB2Q00722 1185 aa12.65□□□□□ -0.38
CTNNA1-237ENST00000523275 AMPD3Q01432 767 aa12.65□□□□□ -0.38
CTNNA1-237ENST00000523275 BFSP1Q12934 665 aa12.65□□□□□ -0.38
CTNNA1-237ENST00000523275 PPP2R5DQ14738 602 aa12.65□□□□□ -0.38
CTNNA1-237ENST00000523275 RALGPS2Q86X27 583 aaPredicted RBP12.65□□□□□ -0.38
CTNNA1-237ENST00000523275 TMEM86AQ8N2M4 240 aa12.65□□□□□ -0.38
CTNNA1-237ENST00000523275 GPD1LQ8N335 351 aa12.65□□□□□ -0.38
CTNNA1-237ENST00000523275 DCLK2Q8N568 766 aa12.65□□□□□ -0.38
CTNNA1-237ENST00000523275 CELF5Q8N6W0 485 aaKnown RBP12.65□□□□□ -0.38
CTNNA1-237ENST00000523275 CXorf38Q8TB03 319 aa12.65□□□□□ -0.38
CTNNA1-237ENST00000523275 ZFYVE19Q96K21 471 aa12.65□□□□□ -0.38
CTNNA1-237ENST00000523275 PI4K2AQ9BTU6 479 aa12.65□□□□□ -0.38
CTNNA1-237ENST00000523275 TNMDQ9H2S6 317 aa12.65□□□□□ -0.38
CTNNA1-237ENST00000523275 CUEDC2Q9H467 287 aa12.65□□□□□ -0.38
CTNNA1-237ENST00000523275 TMLHEQ9NVH6 421 aa12.65□□□□□ -0.38
CTNNA1-237ENST00000523275 KBTBD4Q9NVX7 518 aa12.65□□□□□ -0.38
CTNNA1-237ENST00000523275 THG1LQ9NWX6 298 aaKnown RBP12.65□□□□□ -0.38
CTNNA1-237ENST00000523275 GDAP2Q9NXN4 497 aa12.65□□□□□ -0.38
CTNNA1-237ENST00000523275 DDX43Q9NXZ2 648 aaKnown RBP12.65□□□□□ -0.38
CTNNA1-237ENST00000523275 L1RE1Q9UN81 338 aa12.65□□□□□ -0.38
CTNNA1-237ENST00000523275 ANK1P16157 1881 aa12.64□□□□□ -0.39
CTNNA1-237ENST00000523275 MYBPHLA2RUH7 354 aa12.64□□□□□ -0.39
CTNNA1-237ENST00000523275 ZNF233A6NK53 670 aa12.64□□□□□ -0.39
CTNNA1-237ENST00000523275 SPECC1L-ADORA2AF8WAN1 911 aa12.64□□□□□ -0.39
CTNNA1-237ENST00000523275 PRAMEF12O95522 483 aa12.64□□□□□ -0.39
CTNNA1-237ENST00000523275 F11P03951 625 aa12.64□□□□□ -0.39
CTNNA1-237ENST00000523275 TMEM191BP0C7N4 346 aa12.64□□□□□ -0.39
CTNNA1-237ENST00000523275 HMGA1P17096 107 aaKnown RBP12.64□□□□□ -0.39
CTNNA1-237ENST00000523275 CXCL12P48061 93 aa12.64□□□□□ -0.39
CTNNA1-237ENST00000523275 SOX9P48436 509 aa12.64□□□□□ -0.39
CTNNA1-237ENST00000523275 CCR3P51677 355 aa12.64□□□□□ -0.39
CTNNA1-237ENST00000523275 NLRP12P59046 1061 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms