RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 LRRTM3Q86VH5 581 aa17.45■□□□□ 0.38
CLN8-206ENST00000523237 XXYLT1Q8NBI6 393 aa17.45■□□□□ 0.38
CLN8-206ENST00000523237 RDH13Q8NBN7 331 aa17.45■□□□□ 0.38
CLN8-206ENST00000523237 OR5B17Q8NGF7 314 aa17.45■□□□□ 0.38
CLN8-206ENST00000523237 ZSCAN18Q8TBC5 510 aaPredicted RBP17.45■□□□□ 0.38
CLN8-206ENST00000523237 SPATA18Q8TC71 538 aa17.45■□□□□ 0.38
CLN8-206ENST00000523237 FAM200AQ8TCP9 573 aa17.45■□□□□ 0.38
CLN8-206ENST00000523237 PAGE5Q96GU1 130 aa17.45■□□□□ 0.38
CLN8-206ENST00000523237 FAM84AQ96KN4 292 aa17.45■□□□□ 0.38
CLN8-206ENST00000523237 ZSWIM3Q96MP5 696 aa17.45■□□□□ 0.38
CLN8-206ENST00000523237 ABI2Q9NYB9 513 aaPredicted RBP17.45■□□□□ 0.38
CLN8-206ENST00000523237 L1RE1Q9UN81 338 aa17.45■□□□□ 0.38
CLN8-206ENST00000523237 SNX9Q9Y5X1 595 aa17.45■□□□□ 0.38
CLN8-206ENST00000523237 NUP210Q8TEM1 1887 aaPredicted RBP17.45■□□□□ 0.38
CLN8-206ENST00000523237 PTPRJQ12913 1337 aa17.45■□□□□ 0.38
CLN8-206ENST00000523237 CLIC2O15247 247 aa17.44■□□□□ 0.38
CLN8-206ENST00000523237 MYL7Q01449 175 aa17.44■□□□□ 0.38
CLN8-206ENST00000523237 NFE2Q16621 373 aaPredicted RBP17.44■□□□□ 0.38
CLN8-206ENST00000523237 KNOP1Q1ED39 458 aaKnown RBP17.44■□□□□ 0.38
CLN8-206ENST00000523237 SCARA3Q6AZY7 606 aa17.44■□□□□ 0.38
CLN8-206ENST00000523237 TOP6BLQ8N6T0 577 aa17.44■□□□□ 0.38
CLN8-206ENST00000523237 PJA1Q8NG27 643 aa17.44■□□□□ 0.38
CLN8-206ENST00000523237 FNBP1Q96RU3 617 aa17.44■□□□□ 0.38
CLN8-206ENST00000523237 ACBD6Q9BR61 282 aa17.44■□□□□ 0.38
CLN8-206ENST00000523237 TRMT61BQ9BVS5 477 aaKnown RBP17.44■□□□□ 0.38
CLN8-206ENST00000523237 SCAND2PQ9GZW5 306 aaPredicted RBP17.44■□□□□ 0.38
CLN8-206ENST00000523237 TRPV4Q9HBA0 871 aa17.44■□□□□ 0.38
CLN8-206ENST00000523237 EXOC1Q9NV70 894 aa17.44■□□□□ 0.38
CLN8-206ENST00000523237 DDX43Q9NXZ2 648 aaKnown RBP17.44■□□□□ 0.38
CLN8-206ENST00000523237 HPSEQ9Y251 543 aa17.44■□□□□ 0.38
CLN8-206ENST00000523237 PCDHB5Q9Y5E4 795 aa17.44■□□□□ 0.38
CLN8-206ENST00000523237 PIEZO1Q92508 2521 aa17.43■□□□□ 0.38
CLN8-206ENST00000523237 KANSL1LA0AUZ9 987 aa17.43■□□□□ 0.38
CLN8-206ENST00000523237 KLRC4O43908 158 aa17.43■□□□□ 0.38
CLN8-206ENST00000523237 PRPF40AO75400 957 aaKnown RBP17.43■□□□□ 0.38
CLN8-206ENST00000523237 MYL1P05976 194 aa17.43■□□□□ 0.38
CLN8-206ENST00000523237 DCNP07585 359 aaKnown RBP17.43■□□□□ 0.38
CLN8-206ENST00000523237 DLATP10515 647 aaKnown RBP17.43■□□□□ 0.38
CLN8-206ENST00000523237 HAPLN1P10915 354 aaPredicted RBP17.43■□□□□ 0.38
CLN8-206ENST00000523237 PSMC3P17980 439 aa17.43■□□□□ 0.38
CLN8-206ENST00000523237 ATF6P18850 670 aa17.43■□□□□ 0.38
CLN8-206ENST00000523237 TNNI1P19237 187 aa17.43■□□□□ 0.38
CLN8-206ENST00000523237 LHX1P48742 406 aa17.43■□□□□ 0.38
CLN8-206ENST00000523237 CDR1P51861 262 aa17.43■□□□□ 0.38
CLN8-206ENST00000523237 PSMD2Q13200 908 aa17.43■□□□□ 0.38
CLN8-206ENST00000523237 GRM2Q14416 872 aa17.43■□□□□ 0.38
CLN8-206ENST00000523237 PSMD6Q15008 389 aa17.43■□□□□ 0.38
CLN8-206ENST00000523237 TAF12Q16514 161 aa17.43■□□□□ 0.38
CLN8-206ENST00000523237 GAREM2Q75VX8 874 aa17.43■□□□□ 0.38
CLN8-206ENST00000523237 DPH6Q7L8W6 267 aa17.43■□□□□ 0.38
CLN8-206ENST00000523237 C12orf56Q8IXR9 622 aa17.43■□□□□ 0.38
CLN8-206ENST00000523237 ADGRF2Q8IZF7 708 aa17.43■□□□□ 0.38
CLN8-206ENST00000523237 GOLGA5Q8TBA6 731 aa17.43■□□□□ 0.38
CLN8-206ENST00000523237 DEPDC1BQ8WUY9 529 aa17.43■□□□□ 0.38
CLN8-206ENST00000523237 DNASE1L2Q92874 299 aa17.43■□□□□ 0.38
CLN8-206ENST00000523237 E2F7Q96AV8 911 aa17.43■□□□□ 0.38
CLN8-206ENST00000523237 HPDLQ96IR7 371 aa17.43■□□□□ 0.38
CLN8-206ENST00000523237 CHAMP1Q96JM3 812 aa17.43■□□□□ 0.38
CLN8-206ENST00000523237 LPIN3Q9BQK8 851 aa17.43■□□□□ 0.38
CLN8-206ENST00000523237 DDX23Q9BUQ8 820 aaKnown RBP17.43■□□□□ 0.38
CLN8-206ENST00000523237 FOXQ1Q9C009 403 aa17.43■□□□□ 0.38
CLN8-206ENST00000523237 ATXN3LQ9H3M9 355 aa17.43■□□□□ 0.38
CLN8-206ENST00000523237 BRD9Q9H8M2 597 aa17.43■□□□□ 0.38
CLN8-206ENST00000523237 ZNF334Q9HCZ1 680 aaPredicted RBP17.43■□□□□ 0.38
CLN8-206ENST00000523237 DENND4CQ5VZ89 1909 aa17.43■□□□□ 0.38
CLN8-206ENST00000523237 TICRRQ7Z2Z1 1910 aa17.43■□□□□ 0.38
CLN8-206ENST00000523237 GABRR2P28476 465 aa17.42■□□□□ 0.38
CLN8-206ENST00000523237 PCSK1P29120 753 aa17.42■□□□□ 0.38
CLN8-206ENST00000523237 VIPR2P41587 438 aa17.42■□□□□ 0.38
CLN8-206ENST00000523237 SYKP43405 635 aa17.42■□□□□ 0.38
CLN8-206ENST00000523237 CYP24A1Q07973 514 aa17.42■□□□□ 0.38
CLN8-206ENST00000523237 ANGPT1Q15389 498 aa17.42■□□□□ 0.38
CLN8-206ENST00000523237 SOWAHAQ2M3V2 549 aa17.42■□□□□ 0.38
CLN8-206ENST00000523237 KMT5BQ4FZB7 885 aa17.42■□□□□ 0.38
CLN8-206ENST00000523237 ARHGAP15Q53QZ3 475 aa17.42■□□□□ 0.38
CLN8-206ENST00000523237 INTS6LQ5JSJ4 861 aaKnown RBP17.42■□□□□ 0.38
CLN8-206ENST00000523237 VITQ6UXI7 678 aa17.42■□□□□ 0.38
CLN8-206ENST00000523237 TPRG1Q6ZUI0 275 aa17.42■□□□□ 0.38
CLN8-206ENST00000523237 TRAPPC11Q7Z392 1133 aa17.42■□□□□ 0.38
CLN8-206ENST00000523237 IRF7Q92985 503 aa17.42■□□□□ 0.38
CLN8-206ENST00000523237 CCDC127Q96BQ5 260 aa17.42■□□□□ 0.38
CLN8-206ENST00000523237 GCNAQ96QF7 691 aa17.42■□□□□ 0.38
CLN8-206ENST00000523237 CGRRF1Q99675 332 aa17.42■□□□□ 0.38
CLN8-206ENST00000523237 TMLHEQ9NVH6 421 aa17.42■□□□□ 0.38
CLN8-206ENST00000523237 DLGAP2Q9P1A6 1054 aa17.42■□□□□ 0.38
CLN8-206ENST00000523237 COL4A3Q01955 1670 aa17.42■□□□□ 0.38
CLN8-206ENST00000523237 CACNA1HO95180 2353 aa17.42■□□□□ 0.38
CLN8-206ENST00000523237 GABRDO14764 452 aa17.41■□□□□ 0.38
CLN8-206ENST00000523237 EXOC3O60645 756 aa17.41■□□□□ 0.38
CLN8-206ENST00000523237 ACAT1P24752 427 aaKnown RBP17.41■□□□□ 0.38
CLN8-206ENST00000523237 CDC25CP30307 473 aa17.41■□□□□ 0.38
CLN8-206ENST00000523237 STK4Q13043 487 aa17.41■□□□□ 0.38
CLN8-206ENST00000523237 UBXN2BQ14CS0 331 aa17.41■□□□□ 0.38
CLN8-206ENST00000523237 STXBP5Q5T5C0 1151 aa17.41■□□□□ 0.38
CLN8-206ENST00000523237 MFSD6LQ8IWD5 586 aa17.41■□□□□ 0.38
CLN8-206ENST00000523237 GIPC2Q8TF65 315 aa17.41■□□□□ 0.38
CLN8-206ENST00000523237 PI4K2AQ9BTU6 479 aa17.41■□□□□ 0.38
CLN8-206ENST00000523237 OSBPL6Q9BZF3 934 aa17.41■□□□□ 0.38
CLN8-206ENST00000523237 ABCB6Q9NP58 842 aa17.41■□□□□ 0.38
CLN8-206ENST00000523237 HEBP1Q9NRV9 189 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms