RNA–Protein interactions for RNA: ENST00000523208.5

CD74-209, Transcript of CD74 molecule, humanhuman

TSL 5

Gene CD74, Length 767 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD74-209ENST00000523208 FAM49BQ9NUQ9 324 aa12.36□□□□□ -0.43
CD74-209ENST00000523208 SSX2IPQ9Y2D8 614 aa12.36□□□□□ -0.43
CD74-209ENST00000523208 SIK3Q9Y2K2 1263 aa12.36□□□□□ -0.43
CD74-209ENST00000523208 MTCH2Q9Y6C9 303 aa12.36□□□□□ -0.43
CD74-209ENST00000523208 WDR27A2RRH5 827 aa12.35□□□□□ -0.43
CD74-209ENST00000523208 OR6C75A6NL08 312 aa12.35□□□□□ -0.43
CD74-209ENST00000523208 CBFA2T2O43439 604 aa12.35□□□□□ -0.43
CD74-209ENST00000523208 CILPO75339 1184 aa12.35□□□□□ -0.43
CD74-209ENST00000523208 TACC1O75410 805 aa12.35□□□□□ -0.43
CD74-209ENST00000523208 GLUD1P00367 558 aa12.35□□□□□ -0.43
CD74-209ENST00000523208 TPM3P06753 285 aa12.35□□□□□ -0.43
CD74-209ENST00000523208 PDGFRBP09619 1106 aa12.35□□□□□ -0.43
CD74-209ENST00000523208 KLRC2P26717 231 aa12.35□□□□□ -0.43
CD74-209ENST00000523208 OR1D2P34982 312 aa12.35□□□□□ -0.43
CD74-209ENST00000523208 NDST1P52848 882 aa12.35□□□□□ -0.43
CD74-209ENST00000523208 RBM10P98175 930 aaKnown RBP12.35□□□□□ -0.43
CD74-209ENST00000523208 INCA1Q0VD86 236 aa12.35□□□□□ -0.43
CD74-209ENST00000523208 SLC39A12Q504Y0 691 aa12.35□□□□□ -0.43
CD74-209ENST00000523208 MDH1BQ5I0G3 518 aa12.35□□□□□ -0.43
CD74-209ENST00000523208 PDE12Q6L8Q7 609 aaKnown RBP12.35□□□□□ -0.43
CD74-209ENST00000523208 PHLDB3Q6NSJ2 640 aa12.35□□□□□ -0.43
CD74-209ENST00000523208 GPR153Q6NV75 609 aa12.35□□□□□ -0.43
CD74-209ENST00000523208 PALB2Q86YC2 1186 aa12.35□□□□□ -0.43
CD74-209ENST00000523208 TTC9BQ8N6N2 239 aa12.35□□□□□ -0.43
CD74-209ENST00000523208 RBBP8NLQ8NC74 664 aaPredicted RBP12.35□□□□□ -0.43
CD74-209ENST00000523208 NEK11Q8NG66 645 aa12.35□□□□□ -0.43
CD74-209ENST00000523208 SPATA18Q8TC71 538 aa12.35□□□□□ -0.43
CD74-209ENST00000523208 PPM1EQ8WY54 764 aa12.35□□□□□ -0.43
CD74-209ENST00000523208 KREMEN1Q96MU8 473 aa12.35□□□□□ -0.43
CD74-209ENST00000523208 TLE6Q9H808 572 aa12.35□□□□□ -0.43
CD74-209ENST00000523208 CYP3A43Q9HB55 503 aa12.35□□□□□ -0.43
CD74-209ENST00000523208 UBE2TQ9NPD8 197 aaPredicted RBP12.35□□□□□ -0.43
CD74-209ENST00000523208 NLRC4Q9NPP4 1024 aa12.35□□□□□ -0.43
CD74-209ENST00000523208 RTN4Q9NQC3 1192 aaKnown RBP12.35□□□□□ -0.43
CD74-209ENST00000523208 MAN1C1Q9NR34 630 aa12.35□□□□□ -0.43
CD74-209ENST00000523208 CISHQ9NSE2 258 aa12.35□□□□□ -0.43
CD74-209ENST00000523208 MTMR10Q9NXD2 777 aa12.35□□□□□ -0.43
CD74-209ENST00000523208 ABI2Q9NYB9 513 aaPredicted RBP12.35□□□□□ -0.43
CD74-209ENST00000523208 DNAJC12Q9UKB3 198 aa12.35□□□□□ -0.43
CD74-209ENST00000523208 PCDHB4Q9Y5E5 795 aa12.35□□□□□ -0.43
CD74-209ENST00000523208 BACE2Q9Y5Z0 518 aa12.35□□□□□ -0.43
CD74-209ENST00000523208 MTMR11A4FU01 709 aa12.34□□□□□ -0.43
CD74-209ENST00000523208 LINC01565O15544 149 aa12.34□□□□□ -0.43
CD74-209ENST00000523208 CLASP2O75122 1294 aaKnown RBP12.34□□□□□ -0.43
CD74-209ENST00000523208 ATP2C2O75185 946 aa12.34□□□□□ -0.43
CD74-209ENST00000523208 CCDC130P13994 396 aa12.34□□□□□ -0.43
CD74-209ENST00000523208 CD19P15391 556 aa12.34□□□□□ -0.43
CD74-209ENST00000523208 EPCAMP16422 314 aa12.34□□□□□ -0.43
CD74-209ENST00000523208 TRIM21P19474 475 aaKnown RBP12.34□□□□□ -0.43
CD74-209ENST00000523208 LMO2P25791 158 aa12.34□□□□□ -0.43
CD74-209ENST00000523208 USP8P40818 1118 aa12.34□□□□□ -0.43
CD74-209ENST00000523208 LHX1P48742 406 aa12.34□□□□□ -0.43
CD74-209ENST00000523208 POLR2FP61218 127 aaKnown RBP12.34□□□□□ -0.43
CD74-209ENST00000523208 GCNT1Q02742 428 aa12.34□□□□□ -0.43
CD74-209ENST00000523208 SKIV2LQ15477 1246 aaKnown RBP12.34□□□□□ -0.43
CD74-209ENST00000523208 CCDC85BQ15834 202 aaPredicted RBP12.34□□□□□ -0.43
CD74-209ENST00000523208 DUSP6Q16828 381 aa12.34□□□□□ -0.43
CD74-209ENST00000523208 TMEM270Q6UE05 265 aa12.34□□□□□ -0.43
CD74-209ENST00000523208 ACOT1Q86TX2 421 aa12.34□□□□□ -0.43
CD74-209ENST00000523208 UBR7Q8N806 425 aa12.34□□□□□ -0.43
CD74-209ENST00000523208 MRPL43Q8N983 215 aaKnown RBP12.34□□□□□ -0.43
CD74-209ENST00000523208 ERGIC2Q96RQ1 377 aa12.34□□□□□ -0.43
CD74-209ENST00000523208 LPIN3Q9BQK8 851 aa12.34□□□□□ -0.43
CD74-209ENST00000523208 CLSTN3Q9BQT9 956 aa12.34□□□□□ -0.43
CD74-209ENST00000523208 RHOBTB2Q9BYZ6 727 aa12.34□□□□□ -0.43
CD74-209ENST00000523208 TRIM5Q9C035 493 aa12.34□□□□□ -0.43
CD74-209ENST00000523208 ELOVL4Q9GZR5 314 aa12.34□□□□□ -0.43
CD74-209ENST00000523208 ZCWPW1Q9H0M4 648 aa12.34□□□□□ -0.43
CD74-209ENST00000523208 RXFP1Q9HBX9 757 aa12.34□□□□□ -0.43
CD74-209ENST00000523208 CRTAC1Q9NQ79 661 aa12.34□□□□□ -0.43
CD74-209ENST00000523208 FBXW11Q9UKB1 542 aa12.34□□□□□ -0.43
CD74-209ENST00000523208 CDH9Q9ULB4 789 aa12.34□□□□□ -0.43
CD74-209ENST00000523208 BARX2Q9UMQ3 279 aaPredicted RBP12.34□□□□□ -0.43
CD74-209ENST00000523208 STXBP5LQ9Y2K9 1186 aa12.34□□□□□ -0.43
CD74-209ENST00000523208 HCFC2Q9Y5Z7 792 aa12.34□□□□□ -0.43
CD74-209ENST00000523208 IRAK3Q9Y616 596 aa12.34□□□□□ -0.43
CD74-209ENST00000523208 RANBP2P49792 3224 aaKnown RBP12.34□□□□□ -0.43
CD74-209ENST00000523208 NOTCH4Q99466 2003 aa12.33□□□□□ -0.43
CD74-209ENST00000523208 GABRDO14764 452 aa12.33□□□□□ -0.44
CD74-209ENST00000523208 LILRB3O75022 631 aa12.33□□□□□ -0.44
CD74-209ENST00000523208 OAZ2O95190 189 aa12.33□□□□□ -0.44
CD74-209ENST00000523208 CALCAP01258 141 aa12.33□□□□□ -0.44
CD74-209ENST00000523208 SPATA31D3P0C874 917 aa12.33□□□□□ -0.44
CD74-209ENST00000523208 UCHL3P15374 230 aa12.33□□□□□ -0.44
CD74-209ENST00000523208 RFX1P22670 979 aa12.33□□□□□ -0.44
CD74-209ENST00000523208 ADORA2BP29275 332 aa12.33□□□□□ -0.44
CD74-209ENST00000523208 MFAP3P55082 362 aa12.33□□□□□ -0.44
CD74-209ENST00000523208 CYP27A1Q02318 531 aa12.33□□□□□ -0.44
CD74-209ENST00000523208 HYAL1Q12794 435 aa12.33□□□□□ -0.44
CD74-209ENST00000523208 MRPL58Q14197 206 aaKnown RBP12.33□□□□□ -0.44
CD74-209ENST00000523208 LIN9Q5TKA1 542 aa12.33□□□□□ -0.44
CD74-209ENST00000523208 SLC8B1Q6J4K2 584 aa12.33□□□□□ -0.44
CD74-209ENST00000523208 RNF19BQ6ZMZ0 732 aa12.33□□□□□ -0.44
CD74-209ENST00000523208 SPATA31D4Q6ZUB0 917 aa12.33□□□□□ -0.44
CD74-209ENST00000523208 LIMS2Q7Z4I7 341 aa12.33□□□□□ -0.44
CD74-209ENST00000523208 FAM35AQ86V20 835 aa12.33□□□□□ -0.44
CD74-209ENST00000523208 B3GALNT2Q8NCR0 500 aa12.33□□□□□ -0.44
CD74-209ENST00000523208 STKLD1Q8NE28 680 aa12.33□□□□□ -0.44
CD74-209ENST00000523208 VN1R2Q8NFZ6 395 aa12.33□□□□□ -0.44
CD74-209ENST00000523208 JAKMIP2Q96AA8 810 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms