RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 LRRC3Q9BY71 257 aa11.72□□□□□ -0.53
PVT1-216ENST00000523068 OSBPL6Q9BZF3 934 aa11.72□□□□□ -0.53
PVT1-216ENST00000523068 PLA2G2FQ9BZM2 168 aa11.72□□□□□ -0.53
PVT1-216ENST00000523068 MTMR12Q9C0I1 747 aa11.72□□□□□ -0.53
PVT1-216ENST00000523068 BRD9Q9H8M2 597 aa11.72□□□□□ -0.53
PVT1-216ENST00000523068 INTS13Q9NVM9 706 aa11.72□□□□□ -0.53
PVT1-216ENST00000523068 GDAP2Q9NXN4 497 aa11.72□□□□□ -0.53
PVT1-216ENST00000523068 USP25Q9UHP3 1055 aa11.72□□□□□ -0.53
PVT1-216ENST00000523068 PCDHB5Q9Y5E4 795 aa11.72□□□□□ -0.53
PVT1-216ENST00000523068 ATP6V1DQ9Y5K8 247 aa11.72□□□□□ -0.53
PVT1-216ENST00000523068 GOLGA6L22H0YM25 854 aa11.71□□□□□ -0.53
PVT1-216ENST00000523068 NCAM2O15394 837 aa11.71□□□□□ -0.53
PVT1-216ENST00000523068 TGFB1I1O43294 461 aa11.71□□□□□ -0.53
PVT1-216ENST00000523068 PRPF40AO75400 957 aaKnown RBP11.71□□□□□ -0.53
PVT1-216ENST00000523068 DCNP07585 359 aaKnown RBP11.71□□□□□ -0.53
PVT1-216ENST00000523068 SLFN14P0C7P3 912 aa11.71□□□□□ -0.53
PVT1-216ENST00000523068 GJA1P17302 382 aa11.71□□□□□ -0.53
PVT1-216ENST00000523068 CDC25CP30307 473 aa11.71□□□□□ -0.53
PVT1-216ENST00000523068 HOXD13P35453 343 aa11.71□□□□□ -0.53
PVT1-216ENST00000523068 LHX1P48742 406 aa11.71□□□□□ -0.53
PVT1-216ENST00000523068 CUL4BQ13620 913 aa11.71□□□□□ -0.53
PVT1-216ENST00000523068 UBXN2BQ14CS0 331 aa11.71□□□□□ -0.53
PVT1-216ENST00000523068 SNRNP35Q16560 246 aaKnown RBP11.71□□□□□ -0.53
PVT1-216ENST00000523068 BMT2Q1RMZ1 405 aa11.71□□□□□ -0.53
PVT1-216ENST00000523068 POTEHQ6S545 545 aa11.71□□□□□ -0.53
PVT1-216ENST00000523068 ZNF852Q6ZMS4 543 aa11.71□□□□□ -0.53
PVT1-216ENST00000523068 DPH6Q7L8W6 267 aa11.71□□□□□ -0.53
PVT1-216ENST00000523068 CBWD2Q8IUF1 395 aa11.71□□□□□ -0.53
PVT1-216ENST00000523068 WDR49Q8IV35 697 aa11.71□□□□□ -0.53
PVT1-216ENST00000523068 MFSD6LQ8IWD5 586 aa11.71□□□□□ -0.53
PVT1-216ENST00000523068 PDCL2Q8N4E4 241 aa11.71□□□□□ -0.53
PVT1-216ENST00000523068 TTC9BQ8N6N2 239 aa11.71□□□□□ -0.53
PVT1-216ENST00000523068 TOP6BLQ8N6T0 577 aa11.71□□□□□ -0.53
PVT1-216ENST00000523068 XXYLT1Q8NBI6 393 aa11.71□□□□□ -0.53
PVT1-216ENST00000523068 CXorf38Q8TB03 319 aa11.71□□□□□ -0.53
PVT1-216ENST00000523068 GOLGA5Q8TBA6 731 aa11.71□□□□□ -0.53
PVT1-216ENST00000523068 LEO1Q8WVC0 666 aaPredicted RBP11.71□□□□□ -0.53
PVT1-216ENST00000523068 SCFD1Q8WVM8 642 aa11.71□□□□□ -0.53
PVT1-216ENST00000523068 SPATA32Q96LK8 384 aa11.71□□□□□ -0.53
PVT1-216ENST00000523068 ZSWIM3Q96MP5 696 aa11.71□□□□□ -0.53
PVT1-216ENST00000523068 GCNAQ96QF7 691 aa11.71□□□□□ -0.53
PVT1-216ENST00000523068 FNBP1Q96RU3 617 aa11.71□□□□□ -0.53
PVT1-216ENST00000523068 BCO2Q9BYV7 579 aa11.71□□□□□ -0.53
PVT1-216ENST00000523068 FOXQ1Q9C009 403 aa11.71□□□□□ -0.53
PVT1-216ENST00000523068 BLZF1Q9H2G9 400 aa11.71□□□□□ -0.53
PVT1-216ENST00000523068 ATXN3LQ9H3M9 355 aa11.71□□□□□ -0.53
PVT1-216ENST00000523068 SLC39A2Q9NP94 309 aa11.71□□□□□ -0.53
PVT1-216ENST00000523068 TRPV5Q9NQA5 729 aa11.71□□□□□ -0.53
PVT1-216ENST00000523068 AGPAT3Q9NRZ7 376 aa11.71□□□□□ -0.53
PVT1-216ENST00000523068 DDX43Q9NXZ2 648 aaKnown RBP11.71□□□□□ -0.53
PVT1-216ENST00000523068 ABI2Q9NYB9 513 aaPredicted RBP11.71□□□□□ -0.53
PVT1-216ENST00000523068 ZMYM5Q9UJ78 669 aa11.71□□□□□ -0.53
PVT1-216ENST00000523068 L1RE1Q9UN81 338 aa11.71□□□□□ -0.53
PVT1-216ENST00000523068 MRPS17Q9Y2R5 130 aaKnown RBP11.71□□□□□ -0.53
PVT1-216ENST00000523068 SNX9Q9Y5X1 595 aa11.71□□□□□ -0.53
PVT1-216ENST00000523068 COL4A2P08572 1712 aa11.71□□□□□ -0.54
PVT1-216ENST00000523068 USP34Q70CQ2 3546 aa11.7□□□□□ -0.54
PVT1-216ENST00000523068 MAN2B1O00754 1011 aa11.7□□□□□ -0.54
PVT1-216ENST00000523068 ZNF263O14978 683 aa11.7□□□□□ -0.54
PVT1-216ENST00000523068 GFRA3O60609 400 aa11.7□□□□□ -0.54
PVT1-216ENST00000523068 SOAT2O75908 522 aa11.7□□□□□ -0.54
PVT1-216ENST00000523068 MYL1P05976 194 aa11.7□□□□□ -0.54
PVT1-216ENST00000523068 HAPLN1P10915 354 aaPredicted RBP11.7□□□□□ -0.54
PVT1-216ENST00000523068 TNNI1P19237 187 aa11.7□□□□□ -0.54
PVT1-216ENST00000523068 PTMSP20962 102 aa11.7□□□□□ -0.54
PVT1-216ENST00000523068 CMA1P23946 247 aa11.7□□□□□ -0.54
PVT1-216ENST00000523068 GABRR2P28476 465 aa11.7□□□□□ -0.54
PVT1-216ENST00000523068 PCSK1P29120 753 aa11.7□□□□□ -0.54
PVT1-216ENST00000523068 CASP1P29466 404 aa11.7□□□□□ -0.54
PVT1-216ENST00000523068 GDI1P31150 447 aa11.7□□□□□ -0.54
PVT1-216ENST00000523068 PSMD2Q13200 908 aa11.7□□□□□ -0.54
PVT1-216ENST00000523068 GRM2Q14416 872 aa11.7□□□□□ -0.54
PVT1-216ENST00000523068 KNOP1Q1ED39 458 aaKnown RBP11.7□□□□□ -0.54
PVT1-216ENST00000523068 LMBRD2Q68DH5 695 aaPredicted RBP11.7□□□□□ -0.54
PVT1-216ENST00000523068 VITQ6UXI7 678 aa11.7□□□□□ -0.54
PVT1-216ENST00000523068 TPRG1Q6ZUI0 275 aa11.7□□□□□ -0.54
PVT1-216ENST00000523068 GAREM2Q75VX8 874 aa11.7□□□□□ -0.54
PVT1-216ENST00000523068 LRRTM3Q86VH5 581 aa11.7□□□□□ -0.54
PVT1-216ENST00000523068 C1orf210Q8IVY1 113 aa11.7□□□□□ -0.54
PVT1-216ENST00000523068 NELFCDQ8IXH7 590 aa11.7□□□□□ -0.54
PVT1-216ENST00000523068 YAF2Q8IY57 180 aa11.7□□□□□ -0.54
PVT1-216ENST00000523068 ADGRF2Q8IZF7 708 aa11.7□□□□□ -0.54
PVT1-216ENST00000523068 RDH13Q8NBN7 331 aa11.7□□□□□ -0.54
PVT1-216ENST00000523068 HPDLQ96IR7 371 aa11.7□□□□□ -0.54
PVT1-216ENST00000523068 LPIN3Q9BQK8 851 aa11.7□□□□□ -0.54
PVT1-216ENST00000523068 ABCB6Q9NP58 842 aa11.7□□□□□ -0.54
PVT1-216ENST00000523068 LTB4R2Q9NPC1 389 aa11.7□□□□□ -0.54
PVT1-216ENST00000523068 HEBP1Q9NRV9 189 aa11.7□□□□□ -0.54
PVT1-216ENST00000523068 DLGAP2Q9P1A6 1054 aa11.7□□□□□ -0.54
PVT1-216ENST00000523068 SERTAD1Q9UHV2 236 aa11.7□□□□□ -0.54
PVT1-216ENST00000523068 SIX4Q9UIU6 781 aa11.7□□□□□ -0.54
PVT1-216ENST00000523068 FANCMQ8IYD8 2048 aa11.7□□□□□ -0.54
PVT1-216ENST00000523068 COL4A3Q01955 1670 aa11.69□□□□□ -0.54
PVT1-216ENST00000523068 PTPRDP23468 1912 aa11.69□□□□□ -0.54
PVT1-216ENST00000523068 GREB1Q4ZG55 1949 aa11.69□□□□□ -0.54
PVT1-216ENST00000523068 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.69□□□□□ -0.54
PVT1-216ENST00000523068 FAM170BA6NMN3 283 aa11.69□□□□□ -0.54
PVT1-216ENST00000523068 HEPACAM2A8MVW5 462 aa11.69□□□□□ -0.54
PVT1-216ENST00000523068 NRG2O14511 850 aaPredicted RBP11.69□□□□□ -0.54
PVT1-216ENST00000523068 DPYSL4O14531 572 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms