RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 IL21Q9HBE4 155 aa16.66■□□□□ 0.26
MRPS28-209ENST00000522987 FOXD4L1Q9NU39 408 aa16.66■□□□□ 0.26
MRPS28-209ENST00000522987 DLL3Q9NYJ7 618 aa16.66■□□□□ 0.26
MRPS28-209ENST00000522987 GMEB2Q9UKD1 530 aa16.66■□□□□ 0.26
MRPS28-209ENST00000522987 RAB23Q9ULC3 237 aa16.66■□□□□ 0.26
MRPS28-209ENST00000522987 MAGED2Q9UNF1 606 aaPredicted RBP16.66■□□□□ 0.26
MRPS28-209ENST00000522987 ASB3Q9Y575 518 aa16.66■□□□□ 0.26
MRPS28-209ENST00000522987 HELZP42694 1942 aaKnown RBP16.65■□□□□ 0.26
MRPS28-209ENST00000522987 MYMKA6NI61 221 aa16.65■□□□□ 0.26
MRPS28-209ENST00000522987 BMP15O95972 392 aa16.65■□□□□ 0.26
MRPS28-209ENST00000522987 CYP11A1P05108 521 aa16.65■□□□□ 0.26
MRPS28-209ENST00000522987 ACAT1P24752 427 aaKnown RBP16.65■□□□□ 0.26
MRPS28-209ENST00000522987 ADSSP30520 456 aa16.65■□□□□ 0.26
MRPS28-209ENST00000522987 CASP5P51878 434 aa16.65■□□□□ 0.26
MRPS28-209ENST00000522987 SLFN12LQ6IEE8 588 aa16.65■□□□□ 0.26
MRPS28-209ENST00000522987 ZNF720Q7Z2F6 126 aa16.65■□□□□ 0.26
MRPS28-209ENST00000522987 THEM5Q8N1Q8 247 aa16.65■□□□□ 0.26
MRPS28-209ENST00000522987 BPIFB1Q8TDL5 484 aa16.65■□□□□ 0.26
MRPS28-209ENST00000522987 KCNN1Q92952 543 aa16.65■□□□□ 0.26
MRPS28-209ENST00000522987 GCNAQ96QF7 691 aa16.65■□□□□ 0.26
MRPS28-209ENST00000522987 PI4K2AQ9BTU6 479 aa16.65■□□□□ 0.26
MRPS28-209ENST00000522987 SLC46A2Q9BY10 475 aa16.65■□□□□ 0.26
MRPS28-209ENST00000522987 ASB7Q9H672 318 aa16.65■□□□□ 0.26
MRPS28-209ENST00000522987 TASP1Q9H6P5 420 aa16.65■□□□□ 0.26
MRPS28-209ENST00000522987 FBXO2Q9UK22 296 aaPredicted RBP16.65■□□□□ 0.26
MRPS28-209ENST00000522987 DERAQ9Y315 318 aa16.65■□□□□ 0.26
MRPS28-209ENST00000522987 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.65■□□□□ 0.26
MRPS28-209ENST00000522987 DCDC2BA2VCK2 349 aa16.64■□□□□ 0.25
MRPS28-209ENST00000522987 KPNA7A9QM74 516 aa16.64■□□□□ 0.25
MRPS28-209ENST00000522987 HRO43593 1189 aa16.64■□□□□ 0.25
MRPS28-209ENST00000522987 HCRTO43612 131 aa16.64■□□□□ 0.25
MRPS28-209ENST00000522987 GCNT3O95395 438 aa16.64■□□□□ 0.25
MRPS28-209ENST00000522987 HAPLN1P10915 354 aaPredicted RBP16.64■□□□□ 0.25
MRPS28-209ENST00000522987 IDEP14735 1019 aa16.64■□□□□ 0.25
MRPS28-209ENST00000522987 POLR2BP30876 1174 aaKnown RBP16.64■□□□□ 0.25
MRPS28-209ENST00000522987 PXNP49023 591 aaPredicted RBP16.64■□□□□ 0.25
MRPS28-209ENST00000522987 TUFMP49411 452 aaKnown RBP16.64■□□□□ 0.25
MRPS28-209ENST00000522987 MCM2P49736 904 aa16.64■□□□□ 0.25
MRPS28-209ENST00000522987 NRLP54845 237 aa16.64■□□□□ 0.25
MRPS28-209ENST00000522987 BFSP1Q12934 665 aa16.64■□□□□ 0.25
MRPS28-209ENST00000522987 LRRC32Q14392 662 aa16.64■□□□□ 0.25
MRPS28-209ENST00000522987 PPP2R5DQ14738 602 aa16.64■□□□□ 0.25
MRPS28-209ENST00000522987 PTPAQ15257 358 aa16.64■□□□□ 0.25
MRPS28-209ENST00000522987 ARHGAP29Q52LW3 1261 aa16.64■□□□□ 0.25
MRPS28-209ENST00000522987 RRAGBQ5VZM2 374 aa16.64■□□□□ 0.25
MRPS28-209ENST00000522987 TRIM68Q6AZZ1 485 aa16.64■□□□□ 0.25
MRPS28-209ENST00000522987 PKN3Q6P5Z2 889 aa16.64■□□□□ 0.25
MRPS28-209ENST00000522987 MAB21L3Q8N8X9 362 aa16.64■□□□□ 0.25
MRPS28-209ENST00000522987 BORCS6Q96GS4 357 aa16.64■□□□□ 0.25
MRPS28-209ENST00000522987 TSPAN18Q96SJ8 248 aa16.64■□□□□ 0.25
MRPS28-209ENST00000522987 PCIF1Q9H4Z3 704 aa16.64■□□□□ 0.25
MRPS28-209ENST00000522987 C8orf33Q9H7E9 229 aaPredicted RBP16.64■□□□□ 0.25
MRPS28-209ENST00000522987 CDV3Q9UKY7 258 aaKnown RBP16.64■□□□□ 0.25
MRPS28-209ENST00000522987 DSEQ9UL01 958 aa16.64■□□□□ 0.25
MRPS28-209ENST00000522987 AGAP1Q9UPQ3 857 aa16.64■□□□□ 0.25
MRPS28-209ENST00000522987 CCL26Q9Y258 94 aa16.64■□□□□ 0.25
MRPS28-209ENST00000522987 C2CD2Q9Y426 696 aa16.64■□□□□ 0.25
MRPS28-209ENST00000522987 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.64■□□□□ 0.25
MRPS28-209ENST00000522987 KIAA1549LQ6ZVL6 1849 aa16.63■□□□□ 0.25
MRPS28-209ENST00000522987 NCOR2Q9Y618 2525 aa16.63■□□□□ 0.25
MRPS28-209ENST00000522987 MYBPHLA2RUH7 354 aa16.63■□□□□ 0.25
MRPS28-209ENST00000522987 PRPF40AO75400 957 aaKnown RBP16.63■□□□□ 0.25
MRPS28-209ENST00000522987 ITGB3P05106 788 aa16.63■□□□□ 0.25
MRPS28-209ENST00000522987 TGM1P22735 817 aa16.63■□□□□ 0.25
MRPS28-209ENST00000522987 CDC25CP30307 473 aa16.63■□□□□ 0.25
MRPS28-209ENST00000522987 ATXN1P54253 815 aaKnown RBP16.63■□□□□ 0.25
MRPS28-209ENST00000522987 SIM2Q14190 667 aaPredicted RBP16.63■□□□□ 0.25
MRPS28-209ENST00000522987 SV2CQ496J9 727 aa16.63■□□□□ 0.25
MRPS28-209ENST00000522987 LMBRD2Q68DH5 695 aaPredicted RBP16.63■□□□□ 0.25
MRPS28-209ENST00000522987 SPEM1Q8N4L4 309 aa16.63■□□□□ 0.25
MRPS28-209ENST00000522987 DNAJC19Q96DA6 116 aa16.63■□□□□ 0.25
MRPS28-209ENST00000522987 FAM126AQ9BYI3 521 aaPredicted RBP16.63■□□□□ 0.25
MRPS28-209ENST00000522987 GKN1Q9NS71 199 aa16.63■□□□□ 0.25
MRPS28-209ENST00000522987 POLR3BQ9NW08 1133 aaPredicted RBP16.63■□□□□ 0.25
MRPS28-209ENST00000522987 CCDC39Q9UFE4 941 aa16.63■□□□□ 0.25
MRPS28-209ENST00000522987 STYXL1Q9Y6J8 313 aa16.63■□□□□ 0.25
MRPS28-209ENST00000522987 PTPRDP23468 1912 aa16.62■□□□□ 0.25
MRPS28-209ENST00000522987 MYOFQ9NZM1 2061 aa16.62■□□□□ 0.25
MRPS28-209ENST00000522987 A0A087X0B3 334 aa16.62■□□□□ 0.25
MRPS28-209ENST00000522987 K7ESF4 209 aa16.62■□□□□ 0.25
MRPS28-209ENST00000522987 PPP1R37O75864 691 aa16.62■□□□□ 0.25
MRPS28-209ENST00000522987 FGF19O95750 216 aa16.62■□□□□ 0.25
MRPS28-209ENST00000522987 KRT19P08727 400 aa16.62■□□□□ 0.25
MRPS28-209ENST00000522987 KCNA4P22459 653 aa16.62■□□□□ 0.25
MRPS28-209ENST00000522987 RESTQ13127 1097 aa16.62■□□□□ 0.25
MRPS28-209ENST00000522987 DDR2Q16832 855 aa16.62■□□□□ 0.25
MRPS28-209ENST00000522987 TXNDC8Q6A555 127 aa16.62■□□□□ 0.25
MRPS28-209ENST00000522987 SV2BQ7L1I2 683 aa16.62■□□□□ 0.25
MRPS28-209ENST00000522987 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.62■□□□□ 0.25
MRPS28-209ENST00000522987 TMEM150AQ86TG1 271 aa16.62■□□□□ 0.25
MRPS28-209ENST00000522987 OSTM1Q86WC4 334 aa16.62■□□□□ 0.25
MRPS28-209ENST00000522987 RALGPS2Q86X27 583 aaPredicted RBP16.62■□□□□ 0.25
MRPS28-209ENST00000522987 SYCP3Q8IZU3 236 aa16.62■□□□□ 0.25
MRPS28-209ENST00000522987 RIN3Q8TB24 985 aa16.62■□□□□ 0.25
MRPS28-209ENST00000522987 SPPL2BQ8TCT7 592 aa16.62■□□□□ 0.25
MRPS28-209ENST00000522987 ACCSQ96QU6 501 aa16.62■□□□□ 0.25
MRPS28-209ENST00000522987 ST6GALNAC4Q9H4F1 302 aa16.62■□□□□ 0.25
MRPS28-209ENST00000522987 EBF3Q9H4W6 596 aa16.62■□□□□ 0.25
MRPS28-209ENST00000522987 STK17AQ9UEE5 414 aa16.62■□□□□ 0.25
MRPS28-209ENST00000522987 L1RE1Q9UN81 338 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms