RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 CD300CQ08708 224 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 FUT11Q495W5 492 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 HSP90AA4PQ58FG1 418 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 FAM124AQ86V42 546 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 CCDC25Q86WR0 208 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 DCP2Q8IU60 420 aaKnown RBP8.68□□□□□ -1.02
HMGB4-204ENST00000522796 FNIP1Q8TF40 1166 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 RASSF5Q8WWW0 418 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 TTC9Q92623 222 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 PBXIP1Q96AQ6 731 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 GRAMD1AQ96CP6 724 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 TCEANC2Q96MN5 208 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 CMTM3Q96MX0 182 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 PHF20Q9BVI0 1012 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 MRPS26Q9BYN8 205 aaKnown RBP8.68□□□□□ -1.02
HMGB4-204ENST00000522796 SLITRK6Q9H5Y7 841 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 STMN3Q9NZ72 180 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 GPRC5DQ9NZD1 345 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 TEKT2Q9UIF3 430 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 GNPTGQ9UJJ9 305 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 PNMA8BQ9ULN7 279 aaPredicted RBP8.68□□□□□ -1.02
HMGB4-204ENST00000522796 SNX8Q9Y5X2 465 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 MAP3K15Q6ZN16 1313 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 ABCA6Q8N139 1617 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 ADCY10Q96PN6 1610 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 ARAP3Q8WWN8 1544 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 PREX1Q8TCU6 1659 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 MIF4GDA9UHW6 222 aaKnown RBP8.68□□□□□ -1.02
HMGB4-204ENST00000522796 TRIM77I1YAP6 450 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 SEMA3EO15041 775 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 RANBP6O60518 1105 aaKnown RBP8.68□□□□□ -1.02
HMGB4-204ENST00000522796 ZPR1O75312 459 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 DCTN3O75935 186 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 HAUS5O94927 633 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 PGM3O95394 542 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 PTPN4P29074 926 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 PKLRP30613 574 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 ETV1P50549 477 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 POLGP54098 1239 aaPredicted RBP8.68□□□□□ -1.02
HMGB4-204ENST00000522796 PEX3P56589 373 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 ENPEPQ07075 957 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 CDC16Q13042 620 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 RRS1Q15050 365 aaKnown RBP8.68□□□□□ -1.02
HMGB4-204ENST00000522796 ACSBG2Q5FVE4 666 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 ZNF658Q5TYW1 1059 aaPredicted RBP8.68□□□□□ -1.02
HMGB4-204ENST00000522796 ZNF410Q86VK4 478 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 TSPYL6Q8N831 410 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 DDI1Q8WTU0 396 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 PLEKHA8Q96JA3 519 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 CEP170P1Q96L14 293 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 GAL3ST1Q99999 423 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 CLPBQ9H078 707 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 ACAD9Q9H845 621 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 CRLF2Q9HC73 371 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 ATP13A1Q9HD20 1204 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 CD209Q9NNX6 404 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 FGFR1OP2Q9NVK5 253 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 GPRC5BQ9NZH0 403 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 TNFRSF10DQ9UBN6 386 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 POU2F3Q9UKI9 436 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 ZFYVE9O95405 1425 aa8.67□□□□□ -1.02
HMGB4-204ENST00000522796 ATP7BP35670 1465 aa8.67□□□□□ -1.02
HMGB4-204ENST00000522796 ZSCAN5CA6NGD5 496 aaPredicted RBP8.67□□□□□ -1.02
HMGB4-204ENST00000522796 A8MXQ7 604 aa8.67□□□□□ -1.02
HMGB4-204ENST00000522796 MAPK13O15264 365 aa8.67□□□□□ -1.02
HMGB4-204ENST00000522796 JAK2O60674 1132 aa8.67□□□□□ -1.02
HMGB4-204ENST00000522796 GUCA1CO95843 209 aa8.67□□□□□ -1.02
HMGB4-204ENST00000522796 RPS2P15880 293 aaKnown RBP8.67□□□□□ -1.02
HMGB4-204ENST00000522796 CDH2P19022 906 aaPredicted RBP8.67□□□□□ -1.02
HMGB4-204ENST00000522796 NUDT1P36639 197 aa8.67□□□□□ -1.02
HMGB4-204ENST00000522796 MLLT3P42568 568 aaPredicted RBP8.67□□□□□ -1.02
HMGB4-204ENST00000522796 FOXK1P85037 733 aa8.67□□□□□ -1.02
HMGB4-204ENST00000522796 DIP2AQ14689 1571 aa8.67□□□□□ -1.02
HMGB4-204ENST00000522796 NKX1-1Q15270 411 aaPredicted RBP8.67□□□□□ -1.02
HMGB4-204ENST00000522796 CLUL1Q15846 466 aa8.67□□□□□ -1.02
HMGB4-204ENST00000522796 LEXMQ3ZCV2 418 aa8.67□□□□□ -1.02
HMGB4-204ENST00000522796 CFAP221Q4G0U5 840 aa8.67□□□□□ -1.02
HMGB4-204ENST00000522796 ALFQ53S48 1182 aa8.67□□□□□ -1.02
HMGB4-204ENST00000522796 ZBTB41Q5SVQ8 909 aa8.67□□□□□ -1.02
HMGB4-204ENST00000522796 CHADLQ6NUI6 762 aa8.67□□□□□ -1.02
HMGB4-204ENST00000522796 RALGPS2Q86X27 583 aaPredicted RBP8.67□□□□□ -1.02
HMGB4-204ENST00000522796 METTL25Q8N6Q8 603 aa8.67□□□□□ -1.02
HMGB4-204ENST00000522796 GTF3C2Q8WUA4 911 aaPredicted RBP8.67□□□□□ -1.02
HMGB4-204ENST00000522796 UBLCP1Q8WVY7 318 aaPredicted RBP8.67□□□□□ -1.02
HMGB4-204ENST00000522796 SEPT1Q8WYJ6 367 aa8.67□□□□□ -1.02
HMGB4-204ENST00000522796 TTC17Q96AE7 1141 aa8.67□□□□□ -1.02
HMGB4-204ENST00000522796 REXO5Q96IC2 774 aaKnown RBP8.67□□□□□ -1.02
HMGB4-204ENST00000522796 LLPHQ9BRT6 129 aaKnown RBP8.67□□□□□ -1.02
HMGB4-204ENST00000522796 C17orf80Q9BSJ5 609 aa8.67□□□□□ -1.02
HMGB4-204ENST00000522796 KIAA1586Q9HCI6 787 aa8.67□□□□□ -1.02
HMGB4-204ENST00000522796 POLR3EQ9NVU0 708 aa8.67□□□□□ -1.02
HMGB4-204ENST00000522796 HAO1Q9UJM8 370 aa8.67□□□□□ -1.02
HMGB4-204ENST00000522796 POLHQ9Y253 713 aa8.67□□□□□ -1.02
HMGB4-204ENST00000522796 MYH7BA7E2Y1 1941 aa8.67□□□□□ -1.02
HMGB4-204ENST00000522796 FAM170AA1A519 330 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 CHURC1-FNTBB4DL54 471 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 DDX3XO00571 662 aaKnown RBP eCLIP8.66□□□□□ -1.02
HMGB4-204ENST00000522796 XPO1O14980 1071 aaKnown RBP8.66□□□□□ -1.02
HMGB4-204ENST00000522796 KPNA5O15131 536 aa8.66□□□□□ -1.02
HMGB4-204ENST00000522796 RNMTO43148 476 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms