RNA–Protein interactions for RNA: ENST00000522746.5

FAM49B-223, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-223ENST00000522746 FSCN1Q16658 493 aaKnown RBP17.64■□□□□ 0.42
FAM49B-223ENST00000522746 NOTUMQ6P988 496 aa17.64■□□□□ 0.42
FAM49B-223ENST00000522746 IQCKQ8N0W5 287 aa17.64■□□□□ 0.42
FAM49B-223ENST00000522746 TMEM176AQ96HP8 235 aa17.64■□□□□ 0.42
FAM49B-223ENST00000522746 SNX27Q96L92 541 aa17.64■□□□□ 0.42
FAM49B-223ENST00000522746 NXF3Q9H4D5 531 aaKnown RBP17.64■□□□□ 0.42
FAM49B-223ENST00000522746 CYP3A43Q9HB55 503 aa17.64■□□□□ 0.42
FAM49B-223ENST00000522746 IP6K2Q9UHH9 426 aa17.64■□□□□ 0.42
FAM49B-223ENST00000522746 RALGAPA2Q2PPJ7 1873 aa17.64■□□□□ 0.41
FAM49B-223ENST00000522746 PPEF2O14830 753 aa17.64■□□□□ 0.41
FAM49B-223ENST00000522746 PSTPIP1O43586 416 aa17.64■□□□□ 0.41
FAM49B-223ENST00000522746 PGK1P00558 417 aa17.64■□□□□ 0.41
FAM49B-223ENST00000522746 P4HA1P13674 534 aa17.64■□□□□ 0.41
FAM49B-223ENST00000522746 SNX17Q15036 470 aa17.64■□□□□ 0.41
FAM49B-223ENST00000522746 GLRA4Q5JXX5 417 aa17.64■□□□□ 0.41
FAM49B-223ENST00000522746 PPP1R15BQ5SWA1 713 aa17.64■□□□□ 0.41
FAM49B-223ENST00000522746 CFAP58Q5T655 872 aa17.64■□□□□ 0.41
FAM49B-223ENST00000522746 NT5DC4Q86YG4 428 aa17.64■□□□□ 0.41
FAM49B-223ENST00000522746 CD302Q8IX05 232 aa17.64■□□□□ 0.41
FAM49B-223ENST00000522746 C1orf54Q8WWF1 131 aa17.64■□□□□ 0.41
FAM49B-223ENST00000522746 LHX5Q9H2C1 402 aa17.64■□□□□ 0.41
FAM49B-223ENST00000522746 C6orf222P0C671 652 aaPredicted RBP17.63■□□□□ 0.41
FAM49B-223ENST00000522746 MAN1A1P33908 653 aa17.63■□□□□ 0.41
FAM49B-223ENST00000522746 DMTNQ08495 405 aa17.63■□□□□ 0.41
FAM49B-223ENST00000522746 SMYD5Q6GMV2 418 aa17.63■□□□□ 0.41
FAM49B-223ENST00000522746 DCUN1D2Q6PH85 259 aa17.63■□□□□ 0.41
FAM49B-223ENST00000522746 CCDC50Q8IVM0 306 aa17.63■□□□□ 0.41
FAM49B-223ENST00000522746 CCDC105Q8IYK2 499 aa17.63■□□□□ 0.41
FAM49B-223ENST00000522746 C12orf50Q8NA57 414 aaPredicted RBP17.63■□□□□ 0.41
FAM49B-223ENST00000522746 SH3GL2Q99962 352 aa17.63■□□□□ 0.41
FAM49B-223ENST00000522746 APOL6Q9BWW8 343 aa17.63■□□□□ 0.41
FAM49B-223ENST00000522746 FAM204AQ9H8W3 233 aa17.63■□□□□ 0.41
FAM49B-223ENST00000522746 TUBGCP4Q9UGJ1 667 aa17.63■□□□□ 0.41
FAM49B-223ENST00000522746 RASAL2Q9UJF2 1139 aa17.63■□□□□ 0.41
FAM49B-223ENST00000522746 PTPN22Q9Y2R2 807 aa17.63■□□□□ 0.41
FAM49B-223ENST00000522746 SNX24Q9Y343 169 aa17.63■□□□□ 0.41
FAM49B-223ENST00000522746 Q9Y3F1 56 aa17.63■□□□□ 0.41
FAM49B-223ENST00000522746 SCN1AP35498 2009 aa17.63■□□□□ 0.41
FAM49B-223ENST00000522746 F8VP50 259 aa17.63■□□□□ 0.41
FAM49B-223ENST00000522746 GOLGA8SH3BPF8 625 aa17.63■□□□□ 0.41
FAM49B-223ENST00000522746 MICAL2O94851 1124 aa17.63■□□□□ 0.41
FAM49B-223ENST00000522746 CYBAP13498 195 aa17.63■□□□□ 0.41
FAM49B-223ENST00000522746 ELNP15502 786 aa17.63■□□□□ 0.41
FAM49B-223ENST00000522746 NDST1P52848 882 aa17.63■□□□□ 0.41
FAM49B-223ENST00000522746 PURAQ00577 322 aaKnown RBP17.63■□□□□ 0.41
FAM49B-223ENST00000522746 ATP13A4Q4VNC1 1196 aa17.63■□□□□ 0.41
FAM49B-223ENST00000522746 ANKS1BQ7Z6G8 1248 aa17.63■□□□□ 0.41
FAM49B-223ENST00000522746 C3orf20Q8ND61 904 aa17.63■□□□□ 0.41
FAM49B-223ENST00000522746 C18orf25Q96B23 403 aaPredicted RBP17.63■□□□□ 0.41
FAM49B-223ENST00000522746 CAPNS2Q96L46 248 aa17.63■□□□□ 0.41
FAM49B-223ENST00000522746 CPXM1Q96SM3 734 aa17.63■□□□□ 0.41
FAM49B-223ENST00000522746 RUFY1Q96T51 708 aa17.63■□□□□ 0.41
FAM49B-223ENST00000522746 HEMGNQ9BXL5 484 aa17.63■□□□□ 0.41
FAM49B-223ENST00000522746 PLEKHA5Q9HAU0 1116 aa17.63■□□□□ 0.41
FAM49B-223ENST00000522746 KLHL11Q9NVR0 708 aa17.63■□□□□ 0.41
FAM49B-223ENST00000522746 PIN4Q9Y237 131 aaKnown RBP17.63■□□□□ 0.41
FAM49B-223ENST00000522746 C17orf102A2RUQ5 167 aa17.62■□□□□ 0.41
FAM49B-223ENST00000522746 STAU1O95793 577 aaKnown RBP17.62■□□□□ 0.41
FAM49B-223ENST00000522746 RALAP11233 206 aa17.62■□□□□ 0.41
FAM49B-223ENST00000522746 AKR1A1P14550 325 aa17.62■□□□□ 0.41
FAM49B-223ENST00000522746 AKAP5P24588 427 aa17.62■□□□□ 0.41
FAM49B-223ENST00000522746 YARSP54577 528 aaKnown RBP17.62■□□□□ 0.41
FAM49B-223ENST00000522746 SNX1Q13596 522 aa17.62■□□□□ 0.41
FAM49B-223ENST00000522746 SGO2Q562F6 1265 aa17.62■□□□□ 0.41
FAM49B-223ENST00000522746 DPH6Q7L8W6 267 aa17.62■□□□□ 0.41
FAM49B-223ENST00000522746 APBB1IPQ7Z5R6 666 aaPredicted RBP17.62■□□□□ 0.41
FAM49B-223ENST00000522746 KATNAL2Q8IYT4 538 aa17.62■□□□□ 0.41
FAM49B-223ENST00000522746 ATG4AQ8WYN0 398 aa17.62■□□□□ 0.41
FAM49B-223ENST00000522746 HHIPL1Q96JK4 782 aa17.62■□□□□ 0.41
FAM49B-223ENST00000522746 HEXIM2Q96MH2 286 aaKnown RBP17.62■□□□□ 0.41
FAM49B-223ENST00000522746 TRIM6Q9C030 488 aaPredicted RBP17.62■□□□□ 0.41
FAM49B-223ENST00000522746 LRRC19Q9H756 370 aa17.62■□□□□ 0.41
FAM49B-223ENST00000522746 CHST7Q9NS84 486 aa17.62■□□□□ 0.41
FAM49B-223ENST00000522746 ZDHHC18Q9NUE0 388 aa17.62■□□□□ 0.41
FAM49B-223ENST00000522746 BARX2Q9UMQ3 279 aaPredicted RBP17.62■□□□□ 0.41
FAM49B-223ENST00000522746 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.62■□□□□ 0.41
FAM49B-223ENST00000522746 RECQL4O94761 1208 aa17.62■□□□□ 0.41
FAM49B-223ENST00000522746 KRT14P02533 472 aa17.62■□□□□ 0.41
FAM49B-223ENST00000522746 HSD17B3P37058 310 aa17.62■□□□□ 0.41
FAM49B-223ENST00000522746 INCA1Q0VD86 236 aa17.62■□□□□ 0.41
FAM49B-223ENST00000522746 ZBTB6Q15916 424 aa17.62■□□□□ 0.41
FAM49B-223ENST00000522746 UAP1Q16222 522 aaPredicted RBP17.62■□□□□ 0.41
FAM49B-223ENST00000522746 KATNAL1Q9BW62 490 aa17.62■□□□□ 0.41
FAM49B-223ENST00000522746 RNF186Q9NXI6 227 aa17.62■□□□□ 0.41
FAM49B-223ENST00000522746 M0QYV0 167 aa17.61■□□□□ 0.41
FAM49B-223ENST00000522746 MYCNP04198 464 aaPredicted RBP17.61■□□□□ 0.41
FAM49B-223ENST00000522746 ERBB2P04626 1255 aa17.61■□□□□ 0.41
FAM49B-223ENST00000522746 RPL21P46778 160 aaKnown RBP17.61■□□□□ 0.41
FAM49B-223ENST00000522746 FNTAP49354 379 aa17.61■□□□□ 0.41
FAM49B-223ENST00000522746 PCBP1Q15365 356 aaKnown RBP eCLIP17.61■□□□□ 0.414e-6■■■■■ 36.2
FAM49B-223ENST00000522746 C7orf31Q8N865 590 aa17.61■□□□□ 0.41
FAM49B-223ENST00000522746 RNF25Q96BH1 459 aaPredicted RBP17.61■□□□□ 0.41
FAM49B-223ENST00000522746 ARL8AQ96BM9 186 aa17.61■□□□□ 0.41
FAM49B-223ENST00000522746 GRHL1Q9NZI5 618 aa17.61■□□□□ 0.41
FAM49B-223ENST00000522746 STRIP2Q9ULQ0 834 aa17.61■□□□□ 0.41
FAM49B-223ENST00000522746 R3HDM2Q9Y2K5 976 aaKnown RBP17.61■□□□□ 0.41
FAM49B-223ENST00000522746 DERAQ9Y315 318 aa17.61■□□□□ 0.41
FAM49B-223ENST00000522746 PODXLO00592 558 aa17.6■□□□□ 0.41
FAM49B-223ENST00000522746 OPA1O60313 960 aa17.6■□□□□ 0.41
FAM49B-223ENST00000522746 TOMM70O94826 608 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms