RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 CDC45O75419 566 aa6.9□□□□□ -1.3
PABPC1-220ENST00000522658 PSMD10O75832 226 aa6.9□□□□□ -1.3
PABPC1-220ENST00000522658 DDHD2O94830 711 aa6.9□□□□□ -1.3
PABPC1-220ENST00000522658 SPATA31D3P0C874 917 aa6.9□□□□□ -1.3
PABPC1-220ENST00000522658 MAOBP27338 520 aa6.9□□□□□ -1.3
PABPC1-220ENST00000522658 ARHGAP8P85298 464 aa6.9□□□□□ -1.3
PABPC1-220ENST00000522658 DSG1Q02413 1049 aa6.9□□□□□ -1.3
PABPC1-220ENST00000522658 PRKCQQ04759 706 aa6.9□□□□□ -1.3
PABPC1-220ENST00000522658 CSTF1Q05048 431 aaKnown RBP6.9□□□□□ -1.3
PABPC1-220ENST00000522658 LAMTOR4Q0VGL1 99 aa6.9□□□□□ -1.3
PABPC1-220ENST00000522658 ELAVL2Q12926 359 aaKnown RBP6.9□□□□□ -1.3
PABPC1-220ENST00000522658 MXD4Q14582 209 aaPredicted RBP6.9□□□□□ -1.3
PABPC1-220ENST00000522658 TARBP2Q15633 366 aaKnown RBP6.9□□□□□ -1.3
PABPC1-220ENST00000522658 MLF2Q15773 248 aaPredicted RBP6.9□□□□□ -1.3
PABPC1-220ENST00000522658 SPRED3Q2MJR0 410 aa6.9□□□□□ -1.3
PABPC1-220ENST00000522658 Q4G0T1 1027 aa6.9□□□□□ -1.3
PABPC1-220ENST00000522658 XKR9Q5GH70 373 aa6.9□□□□□ -1.3
PABPC1-220ENST00000522658 ZBTB41Q5SVQ8 909 aa6.9□□□□□ -1.3
PABPC1-220ENST00000522658 KIAA0319Q5VV43 1072 aa6.9□□□□□ -1.3
PABPC1-220ENST00000522658 SEZ6L2Q6UXD5 910 aa6.9□□□□□ -1.3
PABPC1-220ENST00000522658 SPATA31D4Q6ZUB0 917 aa6.9□□□□□ -1.3
PABPC1-220ENST00000522658 CEP57Q86XR8 500 aa6.9□□□□□ -1.3
PABPC1-220ENST00000522658 KSR1Q8IVT5 923 aa6.9□□□□□ -1.3
PABPC1-220ENST00000522658 SLC44A3Q8N4M1 653 aa6.9□□□□□ -1.3
PABPC1-220ENST00000522658 CRYGNQ8WXF5 182 aa6.9□□□□□ -1.3
PABPC1-220ENST00000522658 TMEM143Q96AN5 459 aa6.9□□□□□ -1.3
PABPC1-220ENST00000522658 CHAMP1Q96JM3 812 aa6.9□□□□□ -1.3
PABPC1-220ENST00000522658 GAD1Q99259 594 aa6.9□□□□□ -1.3
PABPC1-220ENST00000522658 ADPGKQ9BRR6 497 aa6.9□□□□□ -1.3
PABPC1-220ENST00000522658 TRIM56Q9BRZ2 755 aaKnown RBP6.9□□□□□ -1.3
PABPC1-220ENST00000522658 LXNQ9BS40 222 aa6.9□□□□□ -1.3
PABPC1-220ENST00000522658 PHF20Q9BVI0 1012 aa6.9□□□□□ -1.3
PABPC1-220ENST00000522658 NT5C3AQ9H0P0 336 aa6.9□□□□□ -1.3
PABPC1-220ENST00000522658 CSRNP2Q9H175 543 aa6.9□□□□□ -1.3
PABPC1-220ENST00000522658 SEMA6CQ9H3T2 930 aa6.9□□□□□ -1.3
PABPC1-220ENST00000522658 ACSS3Q9H6R3 686 aa6.9□□□□□ -1.3
PABPC1-220ENST00000522658 FNIP2Q9P278 1114 aa6.9□□□□□ -1.3
PABPC1-220ENST00000522658 ADAM28Q9UKQ2 775 aa6.9□□□□□ -1.3
PABPC1-220ENST00000522658 CDH7Q9ULB5 785 aa6.9□□□□□ -1.3
PABPC1-220ENST00000522658 PCDHA4Q9UN74 947 aa6.9□□□□□ -1.3
PABPC1-220ENST00000522658 SMG5Q9UPR3 1016 aaKnown RBP6.9□□□□□ -1.3
PABPC1-220ENST00000522658 GIT1Q9Y2X7 761 aa6.9□□□□□ -1.3
PABPC1-220ENST00000522658 IPPQ9Y573 584 aa6.9□□□□□ -1.3
PABPC1-220ENST00000522658 PCDHGA2Q9Y5H1 932 aa6.9□□□□□ -1.3
PABPC1-220ENST00000522658 PTPRZ1P23471 2315 aaPredicted RBP6.89□□□□□ -1.31
PABPC1-220ENST00000522658 IGKV6-21A0A0C4DH24 114 aa6.89□□□□□ -1.31
PABPC1-220ENST00000522658 CCNT1O60563 726 aaKnown RBP6.89□□□□□ -1.31
PABPC1-220ENST00000522658 N4BP1O75113 896 aaKnown RBP6.89□□□□□ -1.31
PABPC1-220ENST00000522658 CDKL5O76039 1030 aa6.89□□□□□ -1.31
PABPC1-220ENST00000522658 DEXIO95424 95 aa6.89□□□□□ -1.31
PABPC1-220ENST00000522658 NPTXRO95502 500 aa6.89□□□□□ -1.31
PABPC1-220ENST00000522658 TDP2O95551 362 aa6.89□□□□□ -1.31
PABPC1-220ENST00000522658 C1RP00736 705 aa6.89□□□□□ -1.31
PABPC1-220ENST00000522658 C8AP07357 584 aa6.89□□□□□ -1.31
PABPC1-220ENST00000522658 NFICP08651 508 aa6.89□□□□□ -1.31
PABPC1-220ENST00000522658 HNRNPA1P09651 372 aaKnown RBP eCLIP6.89□□□□□ -1.31
PABPC1-220ENST00000522658 LAMP2P13473 410 aa6.89□□□□□ -1.31
PABPC1-220ENST00000522658 GCFC2P16383 781 aaKnown RBP6.89□□□□□ -1.31
PABPC1-220ENST00000522658 IFNAR1P17181 557 aa6.89□□□□□ -1.31
PABPC1-220ENST00000522658 YWHABP31946 246 aaKnown RBP6.89□□□□□ -1.31
PABPC1-220ENST00000522658 ELF1P32519 619 aa6.89□□□□□ -1.31
PABPC1-220ENST00000522658 NPEPPSP55786 919 aa6.89□□□□□ -1.31
PABPC1-220ENST00000522658 CCT2P78371 535 aaKnown RBP6.89□□□□□ -1.31
PABPC1-220ENST00000522658 IRX6P78412 446 aaPredicted RBP6.89□□□□□ -1.31
PABPC1-220ENST00000522658 EXOSC10Q01780 885 aaKnown RBP6.89□□□□□ -1.31
PABPC1-220ENST00000522658 FZD5Q13467 585 aa6.89□□□□□ -1.31
PABPC1-220ENST00000522658 SNW1Q13573 536 aaKnown RBP6.89□□□□□ -1.31
PABPC1-220ENST00000522658 HTR4Q13639 388 aa6.89□□□□□ -1.31
PABPC1-220ENST00000522658 PSMD5Q16401 504 aa6.89□□□□□ -1.31
PABPC1-220ENST00000522658 ZNF528Q3MIS6 628 aa6.89□□□□□ -1.31
PABPC1-220ENST00000522658 ADCK5Q3MIX3 580 aa6.89□□□□□ -1.31
PABPC1-220ENST00000522658 GALNT17Q6IS24 598 aa6.89□□□□□ -1.31
PABPC1-220ENST00000522658 SLC27A1Q6PCB7 646 aa6.89□□□□□ -1.31
PABPC1-220ENST00000522658 MOXD1Q6UVY6 613 aa6.89□□□□□ -1.31
PABPC1-220ENST00000522658 RSPO2Q6UXX9 243 aaPredicted RBP6.89□□□□□ -1.31
PABPC1-220ENST00000522658 TPRG1Q6ZUI0 275 aa6.89□□□□□ -1.31
PABPC1-220ENST00000522658 APBB1IPQ7Z5R6 666 aaPredicted RBP6.89□□□□□ -1.31
PABPC1-220ENST00000522658 GRASPQ7Z6J2 395 aaPredicted RBP6.89□□□□□ -1.31
PABPC1-220ENST00000522658 MRPL10Q7Z7H8 261 aaKnown RBP6.89□□□□□ -1.31
PABPC1-220ENST00000522658 ZBTB8OSQ8IWT0 167 aa6.89□□□□□ -1.31
PABPC1-220ENST00000522658 COLGALT2Q8IYK4 626 aa6.89□□□□□ -1.31
PABPC1-220ENST00000522658 BLIDQ8IZY5 108 aa6.89□□□□□ -1.31
PABPC1-220ENST00000522658 ELMOD1Q8N336 334 aa6.89□□□□□ -1.31
PABPC1-220ENST00000522658 HASPINQ8TF76 798 aa6.89□□□□□ -1.31
PABPC1-220ENST00000522658 PRPF31Q8WWY3 499 aaKnown RBP6.89□□□□□ -1.31
PABPC1-220ENST00000522658 GJA10Q969M2 543 aa6.89□□□□□ -1.31
PABPC1-220ENST00000522658 LENG9Q96B70 501 aa6.89□□□□□ -1.31
PABPC1-220ENST00000522658 CPB2Q96IY4 423 aa6.89□□□□□ -1.31
PABPC1-220ENST00000522658 FAM20AQ96MK3 541 aa6.89□□□□□ -1.31
PABPC1-220ENST00000522658 TTPALQ9BTX7 342 aa6.89□□□□□ -1.31
PABPC1-220ENST00000522658 VN1R3Q9BXE9 311 aa6.89□□□□□ -1.31
PABPC1-220ENST00000522658 IFT122Q9HBG6 1241 aa6.89□□□□□ -1.31
PABPC1-220ENST00000522658 RXFP1Q9HBX9 757 aa6.89□□□□□ -1.31
PABPC1-220ENST00000522658 SLC2A4RGQ9NR83 387 aa6.89□□□□□ -1.31
PABPC1-220ENST00000522658 MARCH5Q9NX47 278 aa6.89□□□□□ -1.31
PABPC1-220ENST00000522658 ZC3H7BQ9UGR2 993 aaKnown RBP6.89□□□□□ -1.31
PABPC1-220ENST00000522658 FBXO4Q9UKT5 387 aa6.89□□□□□ -1.31
PABPC1-220ENST00000522658 NID2Q14112 1375 aa6.89□□□□□ -1.31
PABPC1-220ENST00000522658 C2orf16Q68DN1 1984 aa6.88□□□□□ -1.31
PABPC1-220ENST00000522658 ZMYM2Q9UBW7 1377 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms