RNA–Protein interactions for RNA: ENST00000522230.1

CKS1BP7-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 7, humanhuman

BASIC

Gene CKS1BP7, Length 235 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP7-201ENST00000522230 ARHGEF18Q6ZSZ5 1173 aa3.23□□□□□ -1.89
CKS1BP7-201ENST00000522230 FAM124AQ86V42 546 aa3.23□□□□□ -1.89
CKS1BP7-201ENST00000522230 TAX1BP1Q86VP1 789 aa3.23□□□□□ -1.89
CKS1BP7-201ENST00000522230 TMEM151BQ8IW70 566 aa3.23□□□□□ -1.89
CKS1BP7-201ENST00000522230 ELOA2Q8IYF1 753 aaPredicted RBP3.23□□□□□ -1.89
CKS1BP7-201ENST00000522230 FAM43AQ8N2R8 423 aa3.23□□□□□ -1.89
CKS1BP7-201ENST00000522230 MB21D1Q8N884 522 aa3.23□□□□□ -1.89
CKS1BP7-201ENST00000522230 VPS37AQ8NEZ2 397 aa3.23□□□□□ -1.89
CKS1BP7-201ENST00000522230 BHLHE22Q8NFJ8 381 aaPredicted RBP3.23□□□□□ -1.89
CKS1BP7-201ENST00000522230 IL31RAQ8NI17 732 aa3.23□□□□□ -1.89
CKS1BP7-201ENST00000522230 TNPO1Q92973 898 aaKnown RBP3.23□□□□□ -1.89
CKS1BP7-201ENST00000522230 MRGPRX1Q96LB2 322 aa3.23□□□□□ -1.89
CKS1BP7-201ENST00000522230 FMNL2Q96PY5 1086 aa3.23□□□□□ -1.89
CKS1BP7-201ENST00000522230 STRBPQ96SI9 672 aaKnown RBP3.23□□□□□ -1.89
CKS1BP7-201ENST00000522230 MEIS3Q99687 375 aa3.23□□□□□ -1.89
CKS1BP7-201ENST00000522230 TCF25Q9BQ70 676 aa3.23□□□□□ -1.89
CKS1BP7-201ENST00000522230 STK31Q9BXU1 1019 aa3.23□□□□□ -1.89
CKS1BP7-201ENST00000522230 CPEB1Q9BZB8 566 aaKnown RBP3.23□□□□□ -1.89
CKS1BP7-201ENST00000522230 API5Q9BZZ5 524 aaKnown RBP3.23□□□□□ -1.89
CKS1BP7-201ENST00000522230 C11orf54Q9H0W9 315 aaPredicted RBP3.23□□□□□ -1.89
CKS1BP7-201ENST00000522230 CALCOCO1Q9P1Z2 691 aa3.23□□□□□ -1.89
CKS1BP7-201ENST00000522230 CPNE7Q9UBL6 633 aa3.23□□□□□ -1.89
CKS1BP7-201ENST00000522230 FEZ2Q9UHY8 353 aaPredicted RBP3.23□□□□□ -1.89
CKS1BP7-201ENST00000522230 TAGLN3Q9UI15 199 aa3.23□□□□□ -1.89
CKS1BP7-201ENST00000522230 CAMTA1Q9Y6Y1 1673 aa3.23□□□□□ -1.89
CKS1BP7-201ENST00000522230 KDRP35968 1356 aa3.23□□□□□ -1.89
CKS1BP7-201ENST00000522230 KDM6AO15550 1401 aaPredicted RBP3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 LOC100996750A0A140TA64 210 aa3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 A0A1W2PPL8 197 aa3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 ANO9A1A5B4 782 aa3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 OTOL1A6NHN0 477 aaPredicted RBP3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 GOLIM4O00461 696 aa3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 TBX3O15119 743 aa3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 HOXA3O43365 443 aaPredicted RBP3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 TPD52L2O43399 206 aaKnown RBP3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 NCK2O43639 380 aa3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 PRSS23O95084 383 aa3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 MATN4O95460 622 aa3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 LDHAP00338 332 aaKnown RBP3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 RPLP2P05387 115 aaKnown RBP3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 IL2RBP14784 551 aa3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 PHKG2P15735 406 aa3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 ATP5JP18859 108 aa3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 SLC7A1P30825 629 aa3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 MSX2P35548 267 aaPredicted RBP3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 PRIM2P49643 509 aa3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 ALDH5A1P51649 535 aaPredicted RBP3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 SOX8P57073 446 aa3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 EIF4A1P60842 406 aaKnown RBP3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 PSMC1P62191 440 aaKnown RBP3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 PPP2CBP62714 309 aa3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 PPP2CAP67775 309 aa3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 SP140Q13342 867 aa3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 HDAC1Q13547 482 aaPredicted RBP3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 ALDH1L2Q3SY69 923 aa3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 FAM47AQ5JRC9 791 aa3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 KHDC1LQ5JSQ8 128 aa3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 FKBP15Q5T1M5 1219 aa3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 ANKRD45Q5TZF3 282 aa3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 TSHZ3Q63HK5 1081 aa3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 BORAQ6PGQ7 559 aa3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 FAM111BQ6SJ93 734 aa3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 LCNL1Q6ZST4 164 aa3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 SMIM5Q71RC9 77 aa3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 PDZD4Q76G19 769 aaPredicted RBP3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 LIMS2Q7Z4I7 341 aa3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 SRLQ86TD4 932 aa3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 FAM90A1Q86YD7 464 aa3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 LIX1LQ8IVB5 337 aa3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 C16orf71Q8IYS4 520 aaPredicted RBP3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 LGI4Q8N135 537 aa3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 OTUD7AQ8TE49 926 aaPredicted RBP3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 CASKIN2Q8WXE0 1202 aa3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 CYFIP2Q96F07 1278 aa3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 ZNF512Q96ME7 567 aaPredicted RBP3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 NDC1Q9BTX1 674 aa3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 KRTAP4-6Q9BYQ5 205 aa3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 MRPL46Q9H2W6 279 aaKnown RBP3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 RWDD1Q9H446 243 aaPredicted RBP3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 RSAD1Q9HA92 442 aa3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 SPON1Q9HCB6 807 aa3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 MRPS18AQ9NVS2 196 aaKnown RBP3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 STK32BQ9NY57 414 aa3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 MOCS1Q9NZB8 636 aa3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 PPP4R1LQ9P1A2 415 aa3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 DDX19BQ9UMR2 479 aa3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 AGAP1Q9UPQ3 857 aa3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 SH3BP1Q9Y3L3 701 aa3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 ROBO1Q9Y6N7 1651 aa3.22□□□□□ -1.89
CKS1BP7-201ENST00000522230 ZNF536O15090 1300 aa3.21□□□□□ -1.89
CKS1BP7-201ENST00000522230 ABCC4O15439 1325 aa3.21□□□□□ -1.89
CKS1BP7-201ENST00000522230 WDR17Q8IZU2 1322 aa3.21□□□□□ -1.89
CKS1BP7-201ENST00000522230 USP54Q70EL1 1684 aa3.21□□□□□ -1.9
CKS1BP7-201ENST00000522230 RGS12O14924 1447 aa3.21□□□□□ -1.9
CKS1BP7-201ENST00000522230 COL18A1P39060 1754 aa3.21□□□□□ -1.9
CKS1BP7-201ENST00000522230 CDHR4A6H8M9 788 aa3.21□□□□□ -1.9
CKS1BP7-201ENST00000522230 TMEM233B4DJY2 109 aa3.21□□□□□ -1.9
CKS1BP7-201ENST00000522230 F8W8V4 182 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms