RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 UNC45AQ9H3U1 944 aa14.47□□□□□ -0.09
SYNPO-205ENST00000522122 MTO1Q9Y2Z2 717 aaKnown RBP14.47□□□□□ -0.09
SYNPO-205ENST00000522122 ZBTB12Q9Y330 459 aaPredicted RBP14.47□□□□□ -0.09
SYNPO-205ENST00000522122 NUP188Q5SRE5 1749 aa14.47□□□□□ -0.09
SYNPO-205ENST00000522122 TUBGCP6Q96RT7 1819 aa14.46□□□□□ -0.09
SYNPO-205ENST00000522122 ASB14A6NK59 587 aa14.46□□□□□ -0.09
SYNPO-205ENST00000522122 RFC5P40937 340 aa14.46□□□□□ -0.09
SYNPO-205ENST00000522122 DNAJC3Q13217 504 aa14.46□□□□□ -0.09
SYNPO-205ENST00000522122 BIRC2Q13490 618 aa14.46□□□□□ -0.09
SYNPO-205ENST00000522122 MTM1Q13496 603 aa14.46□□□□□ -0.09
SYNPO-205ENST00000522122 VPS72Q15906 364 aa14.46□□□□□ -0.09
SYNPO-205ENST00000522122 DNAAF5Q86Y56 855 aa14.46□□□□□ -0.09
SYNPO-205ENST00000522122 SGPL1O95470 568 aa14.46□□□□□ -0.09
SYNPO-205ENST00000522122 MCF2P10911 925 aa14.46□□□□□ -0.09
SYNPO-205ENST00000522122 KLC1Q07866 573 aa14.46□□□□□ -0.09
SYNPO-205ENST00000522122 HGSNATQ68CP4 663 aa14.46□□□□□ -0.09
SYNPO-205ENST00000522122 RNF135Q8IUD6 432 aa14.46□□□□□ -0.09
SYNPO-205ENST00000522122 RDM1Q8NG50 284 aa14.46□□□□□ -0.09
SYNPO-205ENST00000522122 ZKSCAN4Q969J2 545 aaPredicted RBP14.46□□□□□ -0.09
SYNPO-205ENST00000522122 AGAP3Q96P47 875 aa14.46□□□□□ -0.09
SYNPO-205ENST00000522122 C19orf81C9J6K1 198 aa14.46□□□□□ -0.09
SYNPO-205ENST00000522122 TKFCQ3LXA3 575 aa14.46□□□□□ -0.09
SYNPO-205ENST00000522122 ZNF280CQ8ND82 737 aa14.46□□□□□ -0.09
SYNPO-205ENST00000522122 ATP8B4Q8TF62 1192 aa14.46□□□□□ -0.09
SYNPO-205ENST00000522122 SCFD2Q8WU76 684 aa14.46□□□□□ -0.09
SYNPO-205ENST00000522122 ATXN2LQ8WWM7 1075 aaKnown RBP14.46□□□□□ -0.09
SYNPO-205ENST00000522122 RPS6P62753 249 aaKnown RBP14.46□□□□□ -0.1
SYNPO-205ENST00000522122 MAPRE2Q15555 327 aa14.46□□□□□ -0.1
SYNPO-205ENST00000522122 TEX2Q8IWB9 1127 aa14.46□□□□□ -0.1
SYNPO-205ENST00000522122 CDC26Q8NHZ8 85 aa14.46□□□□□ -0.1
SYNPO-205ENST00000522122 EPAS1Q99814 870 aa14.46□□□□□ -0.1
SYNPO-205ENST00000522122 ING2Q9H160 280 aa14.46□□□□□ -0.1
SYNPO-205ENST00000522122 USP54Q70EL1 1684 aa14.45□□□□□ -0.1
SYNPO-205ENST00000522122 IRX1P78414 480 aaPredicted RBP14.45□□□□□ -0.1
SYNPO-205ENST00000522122 EVX2Q03828 476 aa14.45□□□□□ -0.1
SYNPO-205ENST00000522122 NSUN2Q08J23 767 aaKnown RBP eCLIP14.45□□□□□ -0.1
SYNPO-205ENST00000522122 MYBPC2Q14324 1141 aa14.45□□□□□ -0.1
SYNPO-205ENST00000522122 TMEM132DQ14C87 1099 aa14.45□□□□□ -0.1
SYNPO-205ENST00000522122 MDH1BQ5I0G3 518 aa14.45□□□□□ -0.1
SYNPO-205ENST00000522122 CBWD2Q8IUF1 395 aa14.45□□□□□ -0.1
SYNPO-205ENST00000522122 PPIL6Q8IXY8 311 aa14.45□□□□□ -0.1
SYNPO-205ENST00000522122 KIFC3Q9BVG8 833 aa14.45□□□□□ -0.1
SYNPO-205ENST00000522122 CDC42EP4Q9H3Q1 356 aaKnown RBP14.45□□□□□ -0.1
SYNPO-205ENST00000522122 KIF9Q9HAQ2 790 aa14.45□□□□□ -0.1
SYNPO-205ENST00000522122 ARHGAP10A1A4S6 786 aa14.45□□□□□ -0.1
SYNPO-205ENST00000522122 HSD17B4P51659 736 aa14.45□□□□□ -0.1
SYNPO-205ENST00000522122 SMTNL2Q2TAL5 461 aa14.45□□□□□ -0.1
SYNPO-205ENST00000522122 FUKQ8N0W3 1084 aa14.45□□□□□ -0.1
SYNPO-205ENST00000522122 MTBPQ96DY7 904 aa14.45□□□□□ -0.1
SYNPO-205ENST00000522122 LBHD1Q9BQE6 289 aaPredicted RBP14.45□□□□□ -0.1
SYNPO-205ENST00000522122 PCMTD2Q9NV79 361 aa14.45□□□□□ -0.1
SYNPO-205ENST00000522122 FBXO28Q9NVF7 368 aa14.45□□□□□ -0.1
SYNPO-205ENST00000522122 B2RBV5 119 aa14.45□□□□□ -0.1
SYNPO-205ENST00000522122 FRA10AC1Q70Z53 315 aa14.45□□□□□ -0.1
SYNPO-205ENST00000522122 RBM46Q8TBY0 533 aaKnown RBP14.45□□□□□ -0.1
SYNPO-205ENST00000522122 CBWD1Q9BRT8 395 aa14.45□□□□□ -0.1
SYNPO-205ENST00000522122 SMARCAD1Q9H4L7 1026 aa14.45□□□□□ -0.1
SYNPO-205ENST00000522122 E2F6O75461 281 aa14.45□□□□□ -0.1
SYNPO-205ENST00000522122 MOCS2O96007 188 aaPredicted RBP14.45□□□□□ -0.1
SYNPO-205ENST00000522122 TPI1P60174 286 aa14.45□□□□□ -0.1
SYNPO-205ENST00000522122 PSMC6P62333 389 aa14.45□□□□□ -0.1
SYNPO-205ENST00000522122 DDR1Q08345 913 aa14.45□□□□□ -0.1
SYNPO-205ENST00000522122 NFIAQ12857 509 aa14.45□□□□□ -0.1
SYNPO-205ENST00000522122 DYNC1I2Q13409 638 aaKnown RBP14.45□□□□□ -0.1
SYNPO-205ENST00000522122 ZNF720Q7Z2F6 126 aa14.45□□□□□ -0.1
SYNPO-205ENST00000522122 ATG4AQ8WYN0 398 aa14.45□□□□□ -0.1
SYNPO-205ENST00000522122 CLMNQ96JQ2 1002 aa14.45□□□□□ -0.1
SYNPO-205ENST00000522122 PSTPIP1O43586 416 aa14.44□□□□□ -0.1
SYNPO-205ENST00000522122 GRAP2O75791 330 aa14.44□□□□□ -0.1
SYNPO-205ENST00000522122 KRT4P19013 534 aa14.44□□□□□ -0.1
SYNPO-205ENST00000522122 RPL21P46778 160 aaKnown RBP14.44□□□□□ -0.1
SYNPO-205ENST00000522122 PREPLQ4J6C6 727 aaPredicted RBP14.44□□□□□ -0.1
SYNPO-205ENST00000522122 ZNF526Q8TF50 670 aaPredicted RBP14.44□□□□□ -0.1
SYNPO-205ENST00000522122 SLC20A1Q8WUM9 679 aa14.44□□□□□ -0.1
SYNPO-205ENST00000522122 TAAR1Q96RJ0 339 aa14.44□□□□□ -0.1
SYNPO-205ENST00000522122 THTPAQ9BU02 230 aa14.44□□□□□ -0.1
SYNPO-205ENST00000522122 KCTD10Q9H3F6 313 aa14.44□□□□□ -0.1
SYNPO-205ENST00000522122 MANSC1Q9H8J5 431 aa14.44□□□□□ -0.1
SYNPO-205ENST00000522122 ZBBXA8MT70 800 aa14.44□□□□□ -0.1
SYNPO-205ENST00000522122 CYP11B1P15538 503 aa14.44□□□□□ -0.1
SYNPO-205ENST00000522122 GEMIN4P57678 1058 aaKnown RBP14.44□□□□□ -0.1
SYNPO-205ENST00000522122 HAS1Q92839 578 aa14.44□□□□□ -0.1
SYNPO-205ENST00000522122 NCLNQ969V3 563 aa14.44□□□□□ -0.1
SYNPO-205ENST00000522122 NT5C1AQ9BXI3 368 aa14.44□□□□□ -0.1
SYNPO-205ENST00000522122 KCNMB3Q9NPA1 279 aa14.44□□□□□ -0.1
SYNPO-205ENST00000522122 WARS2Q9UGM6 360 aaKnown RBP14.44□□□□□ -0.1
SYNPO-205ENST00000522122 BNIP3LO60238 219 aa14.44□□□□□ -0.1
SYNPO-205ENST00000522122 CUL2Q13617 745 aa14.44□□□□□ -0.1
SYNPO-205ENST00000522122 HYIQ5T013 277 aa14.44□□□□□ -0.1
SYNPO-205ENST00000522122 GMCL1P1Q8NEA9 526 aa14.44□□□□□ -0.1
SYNPO-205ENST00000522122 PDCD6IPQ8WUM4 868 aaKnown RBP14.44□□□□□ -0.1
SYNPO-205ENST00000522122 SLC4A7Q9Y6M7 1214 aa14.44□□□□□ -0.1
SYNPO-205ENST00000522122 C4AP0C0L4 1744 aa14.44□□□□□ -0.1
SYNPO-205ENST00000522122 C4BP0C0L5 1744 aa14.44□□□□□ -0.1
SYNPO-205ENST00000522122 C3orf70A6NLC5 250 aaPredicted RBP14.44□□□□□ -0.1
SYNPO-205ENST00000522122 AP3B1O00203 1094 aa14.44□□□□□ -0.1
SYNPO-205ENST00000522122 MED21Q13503 144 aa14.44□□□□□ -0.1
SYNPO-205ENST00000522122 BEGAINQ9BUH8 593 aa14.44□□□□□ -0.1
SYNPO-205ENST00000522122 FRMD8Q9BZ67 464 aaPredicted RBP14.44□□□□□ -0.1
SYNPO-205ENST00000522122 IL18RAPO95256 599 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms