RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 A0A1W2PQ27 194 aa18.33■□□□□ 0.52
SQLE-205ENST00000521232 A0A1W2PQ64 194 aa18.33■□□□□ 0.52
SQLE-205ENST00000521232 A0A1W2PQD8 194 aa18.33■□□□□ 0.52
SQLE-205ENST00000521232 SOAT2O75908 522 aa18.33■□□□□ 0.52
SQLE-205ENST00000521232 HAPLN1P10915 354 aaPredicted RBP18.33■□□□□ 0.52
SQLE-205ENST00000521232 GJA1P17302 382 aa18.33■□□□□ 0.52
SQLE-205ENST00000521232 SYKP43405 635 aa18.33■□□□□ 0.52
SQLE-205ENST00000521232 CYP2J2P51589 502 aa18.33■□□□□ 0.52
SQLE-205ENST00000521232 NDUFA8P51970 172 aa18.33■□□□□ 0.52
SQLE-205ENST00000521232 CYP24A1Q07973 514 aa18.33■□□□□ 0.52
SQLE-205ENST00000521232 MYO1EQ12965 1108 aa18.33■□□□□ 0.52
SQLE-205ENST00000521232 PSMD6Q15008 389 aa18.33■□□□□ 0.52
SQLE-205ENST00000521232 TEAD2Q15562 447 aa18.33■□□□□ 0.52
SQLE-205ENST00000521232 MGAT5BQ3V5L5 792 aa18.33■□□□□ 0.52
SQLE-205ENST00000521232 KMT5BQ4FZB7 885 aa18.33■□□□□ 0.52
SQLE-205ENST00000521232 SLC44A4Q53GD3 710 aa18.33■□□□□ 0.52
SQLE-205ENST00000521232 LIMS2Q7Z4I7 341 aa18.33■□□□□ 0.52
SQLE-205ENST00000521232 ITIH5Q86UX2 942 aa18.33■□□□□ 0.52
SQLE-205ENST00000521232 KIAA0895Q8NCT3 520 aa18.33■□□□□ 0.52
SQLE-205ENST00000521232 TMEM174Q8WUU8 243 aa18.33■□□□□ 0.52
SQLE-205ENST00000521232 SMARCD2Q92925 531 aa18.33■□□□□ 0.52
SQLE-205ENST00000521232 HPDLQ96IR7 371 aa18.33■□□□□ 0.52
SQLE-205ENST00000521232 SHDQ96IW2 340 aa18.33■□□□□ 0.52
SQLE-205ENST00000521232 TRPV4Q9HBA0 871 aa18.33■□□□□ 0.52
SQLE-205ENST00000521232 DDX43Q9NXZ2 648 aaKnown RBP18.33■□□□□ 0.52
SQLE-205ENST00000521232 R3HCC1Q9Y3T6 440 aaKnown RBP18.33■□□□□ 0.52
SQLE-205ENST00000521232 VPS13AQ96RL7 3174 aa18.32■□□□□ 0.52
SQLE-205ENST00000521232 A0A1W2PRU2 124 aa18.32■□□□□ 0.52
SQLE-205ENST00000521232 GABRDO14764 452 aa18.32■□□□□ 0.52
SQLE-205ENST00000521232 PRPF40AO75400 957 aaKnown RBP18.32■□□□□ 0.52
SQLE-205ENST00000521232 ATF6P18850 670 aa18.32■□□□□ 0.52
SQLE-205ENST00000521232 LHX1P48742 406 aa18.32■□□□□ 0.52
SQLE-205ENST00000521232 MYL7Q01449 175 aa18.32■□□□□ 0.52
SQLE-205ENST00000521232 TSPY1Q01534 308 aa18.32■□□□□ 0.52
SQLE-205ENST00000521232 PRKCQQ04759 706 aa18.32■□□□□ 0.52
SQLE-205ENST00000521232 SNW1Q13573 536 aaKnown RBP18.32■□□□□ 0.52
SQLE-205ENST00000521232 BECN1Q14457 450 aa18.32■□□□□ 0.52
SQLE-205ENST00000521232 NFE2Q16621 373 aaPredicted RBP18.32■□□□□ 0.52
SQLE-205ENST00000521232 SOWAHAQ2M3V2 549 aa18.32■□□□□ 0.52
SQLE-205ENST00000521232 TRAPPC11Q7Z392 1133 aa18.32■□□□□ 0.52
SQLE-205ENST00000521232 ALYREFQ86V81 257 aaKnown RBP18.32■□□□□ 0.52
SQLE-205ENST00000521232 CCDC105Q8IYK2 499 aa18.32■□□□□ 0.52
SQLE-205ENST00000521232 GOLGA5Q8TBA6 731 aa18.32■□□□□ 0.52
SQLE-205ENST00000521232 FNBP1Q96RU3 617 aa18.32■□□□□ 0.52
SQLE-205ENST00000521232 SEPT5Q99719 369 aaPredicted RBP18.32■□□□□ 0.52
SQLE-205ENST00000521232 DDX23Q9BUQ8 820 aaKnown RBP18.32■□□□□ 0.52
SQLE-205ENST00000521232 ZNF334Q9HCZ1 680 aaPredicted RBP18.32■□□□□ 0.52
SQLE-205ENST00000521232 EXOC1Q9NV70 894 aa18.32■□□□□ 0.52
SQLE-205ENST00000521232 TMLHEQ9NVH6 421 aa18.32■□□□□ 0.52
SQLE-205ENST00000521232 PCDHB5Q9Y5E4 795 aa18.32■□□□□ 0.52
SQLE-205ENST00000521232 H0Y858 1186 aa18.31■□□□□ 0.52
SQLE-205ENST00000521232 FGF19O95750 216 aa18.31■□□□□ 0.52
SQLE-205ENST00000521232 CST3P01034 146 aaPredicted RBP18.31■□□□□ 0.52
SQLE-205ENST00000521232 DLATP10515 647 aaKnown RBP18.31■□□□□ 0.52
SQLE-205ENST00000521232 TNNI1P19237 187 aa18.31■□□□□ 0.52
SQLE-205ENST00000521232 CDR1P51861 262 aa18.31■□□□□ 0.52
SQLE-205ENST00000521232 GAREM2Q75VX8 874 aa18.31■□□□□ 0.52
SQLE-205ENST00000521232 OSTM1Q86WC4 334 aa18.31■□□□□ 0.52
SQLE-205ENST00000521232 ZSCAN18Q8TBC5 510 aaPredicted RBP18.31■□□□□ 0.52
SQLE-205ENST00000521232 CCDC127Q96BQ5 260 aa18.31■□□□□ 0.52
SQLE-205ENST00000521232 PKMYT1Q99640 499 aa18.31■□□□□ 0.52
SQLE-205ENST00000521232 CGRRF1Q99675 332 aa18.31■□□□□ 0.52
SQLE-205ENST00000521232 LPIN3Q9BQK8 851 aa18.31■□□□□ 0.52
SQLE-205ENST00000521232 GZF1Q9H116 711 aaPredicted RBP18.31■□□□□ 0.52
SQLE-205ENST00000521232 DMAC2Q9NW81 257 aa18.31■□□□□ 0.52
SQLE-205ENST00000521232 SIT1Q9Y3P8 196 aa18.31■□□□□ 0.52
SQLE-205ENST00000521232 F5P12259 2224 aa18.3■□□□□ 0.52
SQLE-205ENST00000521232 EXOC3O60645 756 aa18.3■□□□□ 0.52
SQLE-205ENST00000521232 RFX1P22670 979 aa18.3■□□□□ 0.52
SQLE-205ENST00000521232 VIPR2P41587 438 aa18.3■□□□□ 0.52
SQLE-205ENST00000521232 VEPH1Q14D04 833 aa18.3■□□□□ 0.52
SQLE-205ENST00000521232 MLF2Q15773 248 aaPredicted RBP18.3■□□□□ 0.52
SQLE-205ENST00000521232 INTS6LQ5JSJ4 861 aaKnown RBP18.3■□□□□ 0.52
SQLE-205ENST00000521232 SLC9A9Q8IVB4 645 aa18.3■□□□□ 0.52
SQLE-205ENST00000521232 ADGRF2Q8IZF7 708 aa18.3■□□□□ 0.52
SQLE-205ENST00000521232 DTWD2Q8NBA8 298 aa18.3■□□□□ 0.52
SQLE-205ENST00000521232 FAM200AQ8TCP9 573 aa18.3■□□□□ 0.52
SQLE-205ENST00000521232 ZNF516Q92618 1163 aa18.3■□□□□ 0.52
SQLE-205ENST00000521232 ATOH1Q92858 354 aaPredicted RBP18.3■□□□□ 0.52
SQLE-205ENST00000521232 E2F7Q96AV8 911 aa18.3■□□□□ 0.52
SQLE-205ENST00000521232 PHOX2BQ99453 314 aa18.3■□□□□ 0.52
SQLE-205ENST00000521232 TRMT61BQ9BVS5 477 aaKnown RBP18.3■□□□□ 0.52
SQLE-205ENST00000521232 KCTD10Q9H3F6 313 aa18.3■□□□□ 0.52
SQLE-205ENST00000521232 ABI2Q9NYB9 513 aaPredicted RBP18.3■□□□□ 0.52
SQLE-205ENST00000521232 DLGAP2Q9P1A6 1054 aa18.3■□□□□ 0.52
SQLE-205ENST00000521232 ZFHX2Q9C0A1 2572 aaPredicted RBP18.29■□□□□ 0.52
SQLE-205ENST00000521232 KANSL1LA0AUZ9 987 aa18.29■□□□□ 0.52
SQLE-205ENST00000521232 PDXKO00764 312 aa18.29■□□□□ 0.52
SQLE-205ENST00000521232 RPN1P04843 607 aaKnown RBP18.29■□□□□ 0.52
SQLE-205ENST00000521232 FAM163BP0C2L3 166 aa18.29■□□□□ 0.52
SQLE-205ENST00000521232 PSMC3P17980 439 aa18.29■□□□□ 0.52
SQLE-205ENST00000521232 ACAT1P24752 427 aaKnown RBP18.29■□□□□ 0.52
SQLE-205ENST00000521232 GABRR2P28476 465 aa18.29■□□□□ 0.52
SQLE-205ENST00000521232 PCSK1P29120 753 aa18.29■□□□□ 0.52
SQLE-205ENST00000521232 MRE11P49959 708 aa18.29■□□□□ 0.52
SQLE-205ENST00000521232 FAM171BQ6P995 826 aa18.29■□□□□ 0.52
SQLE-205ENST00000521232 VITQ6UXI7 678 aa18.29■□□□□ 0.52
SQLE-205ENST00000521232 KRBA2Q6ZNG9 492 aa18.29■□□□□ 0.52
SQLE-205ENST00000521232 MFSD6LQ8IWD5 586 aa18.29■□□□□ 0.52
SQLE-205ENST00000521232 FSIP1Q8NA03 581 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms