RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 ATP2C2O75185 946 aa16.03■□□□□ 0.16
SREK1-209ENST00000520953 LCA5LO95447 670 aa16.03■□□□□ 0.16
SREK1-209ENST00000520953 FGBP02675 491 aa16.03■□□□□ 0.16
SREK1-209ENST00000520953 CCDC175P0C221 793 aa16.03■□□□□ 0.16
SREK1-209ENST00000520953 CD19P15391 556 aa16.03■□□□□ 0.16
SREK1-209ENST00000520953 DCLRE1AQ6PJP8 1040 aa16.03■□□□□ 0.16
SREK1-209ENST00000520953 ZNF606Q8WXB4 792 aa16.03■□□□□ 0.16
SREK1-209ENST00000520953 RSPH1Q8WYR4 309 aa16.03■□□□□ 0.16
SREK1-209ENST00000520953 DDX27Q96GQ7 796 aaKnown RBP16.03■□□□□ 0.16
SREK1-209ENST00000520953 DUSP10Q9Y6W6 482 aa16.03■□□□□ 0.16
SREK1-209ENST00000520953 SLU7O95391 586 aaKnown RBP16.03■□□□□ 0.16
SREK1-209ENST00000520953 PFKMP08237 780 aa16.03■□□□□ 0.16
SREK1-209ENST00000520953 TNFAIP3P21580 790 aa16.03■□□□□ 0.16
SREK1-209ENST00000520953 PSMC1P62191 440 aaKnown RBP16.03■□□□□ 0.16
SREK1-209ENST00000520953 ZNF689Q96CS4 500 aaPredicted RBP16.03■□□□□ 0.16
SREK1-209ENST00000520953 TMEM176AQ96HP8 235 aa16.03■□□□□ 0.16
SREK1-209ENST00000520953 HTATIP2Q9BUP3 242 aa16.03■□□□□ 0.16
SREK1-209ENST00000520953 CWH43Q9H720 699 aa16.03■□□□□ 0.16
SREK1-209ENST00000520953 LZTFL1Q9NQ48 299 aa16.03■□□□□ 0.16
SREK1-209ENST00000520953 PCDHA13Q9Y5I0 950 aa16.03■□□□□ 0.16
SREK1-209ENST00000520953 A8MXQ7 604 aa16.02■□□□□ 0.16
SREK1-209ENST00000520953 HOXA2O43364 376 aa16.02■□□□□ 0.16
SREK1-209ENST00000520953 GALTP07902 379 aa16.02■□□□□ 0.16
SREK1-209ENST00000520953 CCDC172P0C7W6 258 aa16.02■□□□□ 0.16
SREK1-209ENST00000520953 ARHGAP25P42331 645 aa16.02■□□□□ 0.16
SREK1-209ENST00000520953 C2CD6Q53TS8 623 aa16.02■□□□□ 0.16
SREK1-209ENST00000520953 CCDC122Q5T0U0 273 aa16.02■□□□□ 0.16
SREK1-209ENST00000520953 ALKBH5Q6P6C2 394 aaKnown RBP16.02■□□□□ 0.16
SREK1-209ENST00000520953 MTERF4Q7Z6M4 381 aaKnown RBP16.02■□□□□ 0.16
SREK1-209ENST00000520953 TOP6BLQ8N6T0 577 aa16.02■□□□□ 0.16
SREK1-209ENST00000520953 CYFIP2Q96F07 1278 aa16.02■□□□□ 0.16
SREK1-209ENST00000520953 FAXDC2Q96IV6 333 aa16.02■□□□□ 0.16
SREK1-209ENST00000520953 UROC1Q96N76 676 aa16.02■□□□□ 0.16
SREK1-209ENST00000520953 WDR24Q96S15 920 aa16.02■□□□□ 0.16
SREK1-209ENST00000520953 RTP3Q9BQQ7 232 aa16.02■□□□□ 0.16
SREK1-209ENST00000520953 IRX2Q9BZI1 471 aaPredicted RBP16.02■□□□□ 0.16
SREK1-209ENST00000520953 FAM49BQ9NUQ9 324 aa16.02■□□□□ 0.16
SREK1-209ENST00000520953 CHORDC1Q9UHD1 332 aaPredicted RBP16.02■□□□□ 0.16
SREK1-209ENST00000520953 TACC1O75410 805 aa16.02■□□□□ 0.15
SREK1-209ENST00000520953 GNL1P36915 607 aaPredicted RBP16.02■□□□□ 0.15
SREK1-209ENST00000520953 GNG11P61952 73 aa16.02■□□□□ 0.15
SREK1-209ENST00000520953 BMS1Q14692 1282 aaKnown RBP16.02■□□□□ 0.15
SREK1-209ENST00000520953 LRRC43Q8N309 656 aa16.02■□□□□ 0.15
SREK1-209ENST00000520953 HEXIM2Q96MH2 286 aaKnown RBP16.02■□□□□ 0.15
SREK1-209ENST00000520953 NT5C1AQ9BXI3 368 aa16.02■□□□□ 0.15
SREK1-209ENST00000520953 GPR62Q9BZJ7 368 aa16.02■□□□□ 0.15
SREK1-209ENST00000520953 STXBP5LQ9Y2K9 1186 aa16.02■□□□□ 0.15
SREK1-209ENST00000520953 VWA8A3KMH1 1905 aa16.01■□□□□ 0.15
SREK1-209ENST00000520953 BAIAP3O94812 1187 aa16.01■□□□□ 0.15
SREK1-209ENST00000520953 MAGEA1P43355 309 aa16.01■□□□□ 0.15
SREK1-209ENST00000520953 YWHAEP62258 255 aaKnown RBP16.01■□□□□ 0.15
SREK1-209ENST00000520953 DENND1BQ6P3S1 775 aa16.01■□□□□ 0.15
SREK1-209ENST00000520953 CPA5Q8WXQ8 436 aa16.01■□□□□ 0.15
SREK1-209ENST00000520953 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.01■□□□□ 0.15
SREK1-209ENST00000520953 MRPL42Q9Y6G3 142 aaKnown RBP16.01■□□□□ 0.15
SREK1-209ENST00000520953 V9GYY5 206 aaPredicted RBP16.01■□□□□ 0.15
SREK1-209ENST00000520953 CCDC130P13994 396 aa16■□□□□ 0.15
SREK1-209ENST00000520953 WARSP23381 471 aaKnown RBP16■□□□□ 0.15
SREK1-209ENST00000520953 TKTP29401 623 aaKnown RBP16■□□□□ 0.15
SREK1-209ENST00000520953 SPA17Q15506 151 aa16■□□□□ 0.15
SREK1-209ENST00000520953 LLGL2Q6P1M3 1020 aa16■□□□□ 0.15
SREK1-209ENST00000520953 TAS1R1Q7RTX1 841 aa16■□□□□ 0.15
SREK1-209ENST00000520953 LRRN4CLQ8ND94 238 aa16■□□□□ 0.15
SREK1-209ENST00000520953 TMEM209Q96SK2 561 aa16■□□□□ 0.15
SREK1-209ENST00000520953 MRPL9Q9BYD2 267 aaKnown RBP16■□□□□ 0.15
SREK1-209ENST00000520953 SNX25Q9H3E2 840 aa16■□□□□ 0.15
SREK1-209ENST00000520953 DDX43Q9NXZ2 648 aaKnown RBP16■□□□□ 0.15
SREK1-209ENST00000520953 SALL4Q9UJQ4 1053 aa16■□□□□ 0.15
SREK1-209ENST00000520953 M0QZQ0 153 aa16■□□□□ 0.15
SREK1-209ENST00000520953 GABRDO14764 452 aa16■□□□□ 0.15
SREK1-209ENST00000520953 TADA2AO75478 443 aa16■□□□□ 0.15
SREK1-209ENST00000520953 BPIFB4P59827 614 aa16■□□□□ 0.15
SREK1-209ENST00000520953 C9orf50Q5SZB4 431 aa16■□□□□ 0.15
SREK1-209ENST00000520953 PPP1R26Q5T8A7 1209 aaPredicted RBP16■□□□□ 0.15
SREK1-209ENST00000520953 NAA35Q5VZE5 725 aa16■□□□□ 0.15
SREK1-209ENST00000520953 PHLDB2Q86SQ0 1253 aa16■□□□□ 0.15
SREK1-209ENST00000520953 KIAA1328Q86T90 577 aa16■□□□□ 0.15
SREK1-209ENST00000520953 WDTC1Q8N5D0 677 aa16■□□□□ 0.15
SREK1-209ENST00000520953 SUSD3Q96L08 255 aa16■□□□□ 0.15
SREK1-209ENST00000520953 VN1R3Q9BXE9 311 aa16■□□□□ 0.15
SREK1-209ENST00000520953 CYTH4Q9UIA0 394 aa16■□□□□ 0.15
SREK1-209ENST00000520953 FAN1Q9Y2M0 1017 aa16■□□□□ 0.15
SREK1-209ENST00000520953 ATMINO43313 823 aaPredicted RBP15.99■□□□□ 0.15
SREK1-209ENST00000520953 ALDH2P05091 517 aa15.99■□□□□ 0.15
SREK1-209ENST00000520953 PAEPP09466 180 aa15.99■□□□□ 0.15
SREK1-209ENST00000520953 ABCB4P21439 1286 aa15.99■□□□□ 0.15
SREK1-209ENST00000520953 BTG3Q14201 252 aaPredicted RBP15.99■□□□□ 0.15
SREK1-209ENST00000520953 CLEC16AQ2KHT3 1053 aa15.99■□□□□ 0.15
SREK1-209ENST00000520953 VPS36Q86VN1 386 aa15.99■□□□□ 0.15
SREK1-209ENST00000520953 FMNL3Q8IVF7 1028 aa15.99■□□□□ 0.15
SREK1-209ENST00000520953 TNS4Q8IZW8 715 aa15.99■□□□□ 0.15
SREK1-209ENST00000520953 OR10T2Q8NGX3 314 aa15.99■□□□□ 0.15
SREK1-209ENST00000520953 UBA3Q8TBC4 463 aa15.99■□□□□ 0.15
SREK1-209ENST00000520953 YME1L1Q96TA2 773 aa15.99■□□□□ 0.15
SREK1-209ENST00000520953 CRTAC1Q9NQ79 661 aa15.99■□□□□ 0.15
SREK1-209ENST00000520953 ADAM28Q9UKQ2 775 aa15.99■□□□□ 0.15
SREK1-209ENST00000520953 LCHNA4D1U4 455 aa15.99■□□□□ 0.15
SREK1-209ENST00000520953 TMEM189-UBE2V1I3L0A0 370 aa15.99■□□□□ 0.15
SREK1-209ENST00000520953 O00370 1275 aa15.99■□□□□ 0.15
SREK1-209ENST00000520953 EFCAB14O75071 495 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms