RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 RNPC3Q96LT9 517 aaKnown RBP9.53□□□□□ -0.88
CSMD1-208ENST00000520561 HEXIM2Q96MH2 286 aaKnown RBP9.53□□□□□ -0.88
CSMD1-208ENST00000520561 TWNKQ96RR1 684 aa9.53□□□□□ -0.88
CSMD1-208ENST00000520561 DESI2Q9BSY9 194 aa9.53□□□□□ -0.88
CSMD1-208ENST00000520561 CWH43Q9H720 699 aa9.53□□□□□ -0.88
CSMD1-208ENST00000520561 ACP6Q9NPH0 428 aa9.53□□□□□ -0.88
CSMD1-208ENST00000520561 CXXC1Q9P0U4 656 aaPredicted RBP9.53□□□□□ -0.88
CSMD1-208ENST00000520561 ADAMTS1Q9UHI8 967 aa9.53□□□□□ -0.88
CSMD1-208ENST00000520561 KIAA1257Q9ULG3 409 aa9.53□□□□□ -0.88
CSMD1-208ENST00000520561 STXBP5LQ9Y2K9 1186 aa9.53□□□□□ -0.88
CSMD1-208ENST00000520561 INSL6Q9Y581 213 aa9.53□□□□□ -0.88
CSMD1-208ENST00000520561 MRPL42Q9Y6G3 142 aaKnown RBP9.53□□□□□ -0.88
CSMD1-208ENST00000520561 A0A087X0T9 212 aa9.52□□□□□ -0.89
CSMD1-208ENST00000520561 NT5C1B-RDH14C9J2C7 533 aa9.52□□□□□ -0.89
CSMD1-208ENST00000520561 DDX3XO00571 662 aaKnown RBP eCLIP9.52□□□□□ -0.89
CSMD1-208ENST00000520561 GABRDO14764 452 aa9.52□□□□□ -0.89
CSMD1-208ENST00000520561 TLL1O43897 1013 aa9.52□□□□□ -0.89
CSMD1-208ENST00000520561 LSM8O95777 96 aaKnown RBP9.52□□□□□ -0.89
CSMD1-208ENST00000520561 MMEP08473 750 aa9.52□□□□□ -0.89
CSMD1-208ENST00000520561 PDGFRBP09619 1106 aa9.52□□□□□ -0.89
CSMD1-208ENST00000520561 FAM228BP0C875 321 aa9.52□□□□□ -0.89
CSMD1-208ENST00000520561 IGFBP6P24592 240 aaPredicted RBP9.52□□□□□ -0.89
CSMD1-208ENST00000520561 PBX3P40426 434 aa9.52□□□□□ -0.89
CSMD1-208ENST00000520561 HTRA4P83105 476 aaPredicted RBP9.52□□□□□ -0.89
CSMD1-208ENST00000520561 TSPY1Q01534 308 aa9.52□□□□□ -0.89
CSMD1-208ENST00000520561 ASTE1Q2TB18 679 aaPredicted RBP9.52□□□□□ -0.89
CSMD1-208ENST00000520561 ZNF280DQ6N043 979 aa9.52□□□□□ -0.89
CSMD1-208ENST00000520561 ALKBH5Q6P6C2 394 aaKnown RBP9.52□□□□□ -0.89
CSMD1-208ENST00000520561 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.52□□□□□ -0.89
CSMD1-208ENST00000520561 ACOT1Q86TX2 421 aa9.52□□□□□ -0.89
CSMD1-208ENST00000520561 OSTM1Q86WC4 334 aa9.52□□□□□ -0.89
CSMD1-208ENST00000520561 COLGALT1Q8NBJ5 622 aa9.52□□□□□ -0.89
CSMD1-208ENST00000520561 B3GALNT2Q8NCR0 500 aa9.52□□□□□ -0.89
CSMD1-208ENST00000520561 ZNF606Q8WXB4 792 aa9.52□□□□□ -0.89
CSMD1-208ENST00000520561 DDX1Q92499 740 aaKnown RBP9.52□□□□□ -0.89
CSMD1-208ENST00000520561 TMEM169Q96HH4 297 aa9.52□□□□□ -0.89
CSMD1-208ENST00000520561 RAD9AQ99638 391 aa9.52□□□□□ -0.89
CSMD1-208ENST00000520561 SYT15Q9BQS2 421 aa9.52□□□□□ -0.89
CSMD1-208ENST00000520561 SYT11Q9BT88 431 aa9.52□□□□□ -0.89
CSMD1-208ENST00000520561 HESX1Q9UBX0 185 aa9.52□□□□□ -0.89
CSMD1-208ENST00000520561 STK39Q9UEW8 545 aa9.52□□□□□ -0.89
CSMD1-208ENST00000520561 NAGPAQ9UK23 515 aa9.52□□□□□ -0.89
CSMD1-208ENST00000520561 CDH9Q9ULB4 789 aa9.52□□□□□ -0.89
CSMD1-208ENST00000520561 PCDHGC3Q9UN70 934 aa9.52□□□□□ -0.89
CSMD1-208ENST00000520561 PPP2R2CQ9Y2T4 447 aa9.52□□□□□ -0.89
CSMD1-208ENST00000520561 PCDHB12Q9Y5F1 795 aa9.52□□□□□ -0.89
CSMD1-208ENST00000520561 TIMM13Q9Y5L4 95 aaPredicted RBP9.52□□□□□ -0.89
CSMD1-208ENST00000520561 ADGRG1Q9Y653 693 aa9.52□□□□□ -0.89
CSMD1-208ENST00000520561 ATP8B3O60423 1300 aa9.52□□□□□ -0.89
CSMD1-208ENST00000520561 GOLGA6L9A6NEM1 432 aa9.51□□□□□ -0.89
CSMD1-208ENST00000520561 M0QYV0 167 aa9.51□□□□□ -0.89
CSMD1-208ENST00000520561 O00370 1275 aa9.51□□□□□ -0.89
CSMD1-208ENST00000520561 LCA5LO95447 670 aa9.51□□□□□ -0.89
CSMD1-208ENST00000520561 CALCAP01258 141 aa9.51□□□□□ -0.89
CSMD1-208ENST00000520561 CHRNB2P17787 502 aa9.51□□□□□ -0.89
CSMD1-208ENST00000520561 FGFR3P22607 806 aa9.51□□□□□ -0.89
CSMD1-208ENST00000520561 ACAT1P24752 427 aaKnown RBP9.51□□□□□ -0.89
CSMD1-208ENST00000520561 TKTP29401 623 aaKnown RBP9.51□□□□□ -0.89
CSMD1-208ENST00000520561 MAGEA1P43355 309 aa9.51□□□□□ -0.89
CSMD1-208ENST00000520561 VAV2P52735 878 aa9.51□□□□□ -0.89
CSMD1-208ENST00000520561 PSMC1P62191 440 aaKnown RBP9.51□□□□□ -0.89
CSMD1-208ENST00000520561 CYP27A1Q02318 531 aa9.51□□□□□ -0.89
CSMD1-208ENST00000520561 MAPRE1Q15691 268 aaKnown RBP9.51□□□□□ -0.89
CSMD1-208ENST00000520561 CNGA2Q16280 664 aa9.51□□□□□ -0.89
CSMD1-208ENST00000520561 CLEC16AQ2KHT3 1053 aa9.51□□□□□ -0.89
CSMD1-208ENST00000520561 GOLGA7BQ2TAP0 167 aa9.51□□□□□ -0.89
CSMD1-208ENST00000520561 MDH1BQ5I0G3 518 aa9.51□□□□□ -0.89
CSMD1-208ENST00000520561 INTS6LQ5JSJ4 861 aaKnown RBP9.51□□□□□ -0.89
CSMD1-208ENST00000520561 VARS2Q5ST30 1063 aaKnown RBP9.51□□□□□ -0.89
CSMD1-208ENST00000520561 CCDC122Q5T0U0 273 aa9.51□□□□□ -0.89
CSMD1-208ENST00000520561 C10orf76Q5T2E6 689 aa9.51□□□□□ -0.89
CSMD1-208ENST00000520561 RASIP1Q5U651 963 aa9.51□□□□□ -0.89
CSMD1-208ENST00000520561 FAM171A1Q5VUB5 890 aa9.51□□□□□ -0.89
CSMD1-208ENST00000520561 NAA35Q5VZE5 725 aa9.51□□□□□ -0.89
CSMD1-208ENST00000520561 ARHGAP17Q68EM7 881 aa9.51□□□□□ -0.89
CSMD1-208ENST00000520561 CEP57Q86XR8 500 aa9.51□□□□□ -0.89
CSMD1-208ENST00000520561 PASD1Q8IV76 773 aa9.51□□□□□ -0.89
CSMD1-208ENST00000520561 SLC39A11Q8N1S5 342 aa9.51□□□□□ -0.89
CSMD1-208ENST00000520561 TMEM35BQ8NCS4 154 aa9.51□□□□□ -0.89
CSMD1-208ENST00000520561 MSANTD4Q8NCY6 345 aa9.51□□□□□ -0.89
CSMD1-208ENST00000520561 SLC30A5Q8TAD4 765 aa9.51□□□□□ -0.89
CSMD1-208ENST00000520561 KIAA1524Q8TCG1 905 aa9.51□□□□□ -0.89
CSMD1-208ENST00000520561 SP7Q8TDD2 431 aaPredicted RBP9.51□□□□□ -0.89
CSMD1-208ENST00000520561 TFAP2BQ92481 460 aa9.51□□□□□ -0.89
CSMD1-208ENST00000520561 TRIM11Q96F44 468 aa9.51□□□□□ -0.89
CSMD1-208ENST00000520561 IGSF21Q96ID5 467 aa9.51□□□□□ -0.89
CSMD1-208ENST00000520561 ACBD6Q9BR61 282 aa9.51□□□□□ -0.89
CSMD1-208ENST00000520561 HERC2P3Q9BVR0 1158 aa9.51□□□□□ -0.89
CSMD1-208ENST00000520561 TSGA10Q9BZW7 698 aa9.51□□□□□ -0.89
CSMD1-208ENST00000520561 UBE2OQ9C0C9 1292 aaKnown RBP9.51□□□□□ -0.89
CSMD1-208ENST00000520561 DPEP3Q9H4B8 488 aa9.51□□□□□ -0.89
CSMD1-208ENST00000520561 FAM49BQ9NUQ9 324 aa9.51□□□□□ -0.89
CSMD1-208ENST00000520561 SPG21Q9NZD8 308 aa9.51□□□□□ -0.89
CSMD1-208ENST00000520561 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.51□□□□□ -0.89
CSMD1-208ENST00000520561 RWDD3Q9Y3V2 267 aa9.51□□□□□ -0.89
CSMD1-208ENST00000520561 NME7Q9Y5B8 376 aa9.51□□□□□ -0.89
CSMD1-208ENST00000520561 PCDHA13Q9Y5I0 950 aa9.51□□□□□ -0.89
CSMD1-208ENST00000520561 KIAA1671Q9BY89 1806 aa9.51□□□□□ -0.89
CSMD1-208ENST00000520561 OR6C75A6NL08 312 aa9.5□□□□□ -0.89
CSMD1-208ENST00000520561 TMCO5BA8MYB1 307 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms