RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 TLK2Q86UE8 772 aa8.92□□□□□ -0.98
HMGB4-203ENST00000519684 PIAS4Q8N2W9 510 aaPredicted RBP8.92□□□□□ -0.98
HMGB4-203ENST00000519684 FBXO25Q8TCJ0 367 aa8.92□□□□□ -0.98
HMGB4-203ENST00000519684 HEMGNQ9BXL5 484 aa8.92□□□□□ -0.98
HMGB4-203ENST00000519684 CAPS2Q9BXY5 557 aa8.92□□□□□ -0.98
HMGB4-203ENST00000519684 OSBPL8Q9BZF1 889 aa8.92□□□□□ -0.98
HMGB4-203ENST00000519684 SDCBP2Q9H190 292 aa8.92□□□□□ -0.98
HMGB4-203ENST00000519684 FAM124BQ9H5Z6 455 aaPredicted RBP8.92□□□□□ -0.98
HMGB4-203ENST00000519684 TMBIM4Q9HC24 238 aa8.92□□□□□ -0.98
HMGB4-203ENST00000519684 DDX56Q9NY93 547 aaKnown RBP8.92□□□□□ -0.98
HMGB4-203ENST00000519684 CWC15Q9P013 229 aaKnown RBP8.92□□□□□ -0.98
HMGB4-203ENST00000519684 WDR35Q9P2L0 1181 aa8.92□□□□□ -0.98
HMGB4-203ENST00000519684 DERAQ9Y315 318 aa8.92□□□□□ -0.98
HMGB4-203ENST00000519684 CITO14578 2027 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 MANSC4A6NHS7 340 aaPredicted RBP8.91□□□□□ -0.98
HMGB4-203ENST00000519684 A6NJR5 290 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 M0QYV0 167 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 STAU1O95793 577 aaKnown RBP8.91□□□□□ -0.98
HMGB4-203ENST00000519684 F2P00734 622 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 IVLP07476 585 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 VDRP11473 427 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 CYP2C9P11712 490 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 FGFR4P22455 802 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 CPT1AP50416 773 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 PSMC1P62191 440 aaKnown RBP8.91□□□□□ -0.98
HMGB4-203ENST00000519684 ZNF844Q08AG5 666 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 TMEM62Q0P6H9 643 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 PTK6Q13882 451 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 MFSD10Q14728 455 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 SLMAPQ14BN4 828 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 PCBP1Q15365 356 aaKnown RBP eCLIP8.91□□□□□ -0.98
HMGB4-203ENST00000519684 ZSCAN26Q16670 478 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 NOTUMQ6P988 496 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 SLC27A1Q6PCB7 646 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 HOOK3Q86VS8 718 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 WDTC1Q8N5D0 677 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 SH2D3CQ8N5H7 860 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 NIPA2Q8N8Q9 360 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 SLC4A11Q8NBS3 891 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 OR2W6PQ8NHA6 318 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 ATL2Q8NHH9 583 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 ATG4AQ8WYN0 398 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 RNF25Q96BH1 459 aaPredicted RBP8.91□□□□□ -0.98
HMGB4-203ENST00000519684 SNF8Q96H20 258 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 HEXIM2Q96MH2 286 aaKnown RBP8.91□□□□□ -0.98
HMGB4-203ENST00000519684 ZMYND15Q9H091 742 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 AP5M1Q9H0R1 490 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 ADAMTS10Q9H324 1103 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 PLEKHA5Q9HAU0 1116 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 CHST7Q9NS84 486 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 WHRNQ9P202 907 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 BCCIPQ9P287 314 aaKnown RBP eCLIP8.91□□□□□ -0.98
HMGB4-203ENST00000519684 SMIM35A0A1B0GVV1 85 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 TCRBV5S1A1TA0A578 114 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 H0YGN5 161 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 MEFVO15553 781 aaPredicted RBP8.91□□□□□ -0.98
HMGB4-203ENST00000519684 ADCY6O43306 1168 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 SHOX2O60902 331 aaPredicted RBP8.91□□□□□ -0.98
HMGB4-203ENST00000519684 MICAL2O94851 1124 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 TJP3O95049 919 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 KRT3P12035 628 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 ATF2P15336 505 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 NR1D1P20393 614 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 PSMA2P25787 234 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 ZNF157P51786 506 aaPredicted RBP8.91□□□□□ -0.98
HMGB4-203ENST00000519684 COPS2P61201 443 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 SKOR1P84550 965 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 LMNB2Q03252 620 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 NFX1Q12986 1120 aaKnown RBP8.91□□□□□ -0.98
HMGB4-203ENST00000519684 ORC1Q13415 861 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 CCNG2Q16589 344 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 HADHQ16836 314 aaKnown RBP8.91□□□□□ -0.98
HMGB4-203ENST00000519684 KRT71Q3SY84 523 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 PTPN20Q4JDL3 420 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 PPP1R15BQ5SWA1 713 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 PRAMEF19Q5SWL8 479 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 AGBL2Q5U5Z8 902 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 KDM7AQ6ZMT4 941 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 ZNF365Q70YC5 407 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 ARFGAP2Q8N6H7 521 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 IPO4Q8TEX9 1081 aaKnown RBP8.91□□□□□ -0.98
HMGB4-203ENST00000519684 ART4Q93070 314 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 TXLNGYQ9BZA5 131 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 TRIM6Q9C030 488 aaPredicted RBP8.91□□□□□ -0.98
HMGB4-203ENST00000519684 ELOVL4Q9GZR5 314 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 PABPC3Q9H361 631 aaKnown RBP8.91□□□□□ -0.98
HMGB4-203ENST00000519684 KLHL11Q9NVR0 708 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 CALCOCO1Q9P1Z2 691 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 KIAA1257Q9ULG3 409 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 BARX2Q9UMQ3 279 aaPredicted RBP8.91□□□□□ -0.98
HMGB4-203ENST00000519684 NFS1Q9Y697 457 aa8.91□□□□□ -0.98
HMGB4-203ENST00000519684 UTRNP46939 3433 aa8.9□□□□□ -0.98
HMGB4-203ENST00000519684 TRPM7Q96QT4 1865 aa8.9□□□□□ -0.98
HMGB4-203ENST00000519684 SIGLEC16A6NMB1 481 aa8.9□□□□□ -0.98
HMGB4-203ENST00000519684 O00370 1275 aa8.9□□□□□ -0.98
HMGB4-203ENST00000519684 RPS6KA5O75582 802 aa8.9□□□□□ -0.98
HMGB4-203ENST00000519684 HMGCRP04035 888 aa8.9□□□□□ -0.98
HMGB4-203ENST00000519684 MYL3P08590 195 aa8.9□□□□□ -0.98
HMGB4-203ENST00000519684 ATF7P17544 494 aaPredicted RBP8.9□□□□□ -0.98
HMGB4-203ENST00000519684 ITIH2P19823 946 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms