RNA–Protein interactions for RNA: ENST00000519632.5

SHPRH-207, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5

Gene SHPRH, Length 5,245 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-207ENST00000519632 PRELPP51888 382 aa12.75□□□□□ -0.37
SHPRH-207ENST00000519632 RAB14P61106 215 aa12.75□□□□□ -0.37
SHPRH-207ENST00000519632 USP46P62068 366 aa12.75□□□□□ -0.37
SHPRH-207ENST00000519632 SLFN12LQ6IEE8 588 aa12.75□□□□□ -0.37
SHPRH-207ENST00000519632 ZFP1Q6P2D0 407 aa12.75□□□□□ -0.37
SHPRH-207ENST00000519632 ISLR2Q6UXK2 745 aa12.75□□□□□ -0.37
SHPRH-207ENST00000519632 CCDC60Q8IWA6 550 aaPredicted RBP12.75□□□□□ -0.37
SHPRH-207ENST00000519632 CCDC24Q8N4L8 307 aa12.75□□□□□ -0.37
SHPRH-207ENST00000519632 BCS1LQ9Y276 419 aa12.75□□□□□ -0.37
SHPRH-207ENST00000519632 PCDHGC5Q9Y5F6 944 aa12.75□□□□□ -0.37
SHPRH-207ENST00000519632 UBE2Q2LH0YL09 131 aa12.75□□□□□ -0.37
SHPRH-207ENST00000519632 CDH3P22223 829 aa12.75□□□□□ -0.37
SHPRH-207ENST00000519632 MMP13P45452 471 aa12.75□□□□□ -0.37
SHPRH-207ENST00000519632 DLGAP5Q15398 846 aa12.75□□□□□ -0.37
SHPRH-207ENST00000519632 LAYNQ6UX15 382 aa12.75□□□□□ -0.37
SHPRH-207ENST00000519632 CCDC81Q6ZN84 652 aa12.75□□□□□ -0.37
SHPRH-207ENST00000519632 FAM13CQ8NE31 585 aa12.75□□□□□ -0.37
SHPRH-207ENST00000519632 SLC7A3Q8WY07 619 aa12.75□□□□□ -0.37
SHPRH-207ENST00000519632 CD209Q9NNX6 404 aa12.75□□□□□ -0.37
SHPRH-207ENST00000519632 NINJ2Q9NZG7 142 aa12.75□□□□□ -0.37
SHPRH-207ENST00000519632 USP17L15C9J2P7 530 aa12.75□□□□□ -0.37
SHPRH-207ENST00000519632 USP17L13C9JLJ4 530 aa12.75□□□□□ -0.37
SHPRH-207ENST00000519632 USP17L11C9JVI0 530 aa12.75□□□□□ -0.37
SHPRH-207ENST00000519632 USP17L18D6R9N7 530 aa12.75□□□□□ -0.37
SHPRH-207ENST00000519632 USP17L22D6RA61 530 aa12.75□□□□□ -0.37
SHPRH-207ENST00000519632 USP17L17D6RBQ6 530 aa12.75□□□□□ -0.37
SHPRH-207ENST00000519632 USP17L19D6RCP7 530 aa12.75□□□□□ -0.37
SHPRH-207ENST00000519632 USP17L20D6RJB6 530 aa12.75□□□□□ -0.37
SHPRH-207ENST00000519632 SORBS3O60504 671 aa12.75□□□□□ -0.37
SHPRH-207ENST00000519632 HOXA13P31271 388 aaPredicted RBP12.75□□□□□ -0.37
SHPRH-207ENST00000519632 FOXO4P98177 505 aa12.75□□□□□ -0.37
SHPRH-207ENST00000519632 USP17L24Q0WX57 530 aa12.75□□□□□ -0.37
SHPRH-207ENST00000519632 SURF1Q15526 300 aa12.75□□□□□ -0.37
SHPRH-207ENST00000519632 ZNF618Q5T7W0 954 aa12.75□□□□□ -0.37
SHPRH-207ENST00000519632 PDPK2PQ6A1A2 396 aa12.75□□□□□ -0.37
SHPRH-207ENST00000519632 CENPPQ6IPU0 288 aa12.75□□□□□ -0.37
SHPRH-207ENST00000519632 USP17L6PQ6QN14 398 aa12.75□□□□□ -0.37
SHPRH-207ENST00000519632 DHDDSQ86SQ9 333 aa12.75□□□□□ -0.37
SHPRH-207ENST00000519632 FBXO36Q8NEA4 188 aa12.75□□□□□ -0.37
SHPRH-207ENST00000519632 DMTF1Q9Y222 760 aa12.75□□□□□ -0.37
SHPRH-207ENST00000519632 LDHAP00338 332 aaKnown RBP12.74□□□□□ -0.37
SHPRH-207ENST00000519632 CCDC166P0CW27 439 aa12.74□□□□□ -0.37
SHPRH-207ENST00000519632 ST13P50502 369 aaKnown RBP12.74□□□□□ -0.37
SHPRH-207ENST00000519632 SESN2P58004 480 aaPredicted RBP12.74□□□□□ -0.37
SHPRH-207ENST00000519632 ACTR2P61160 394 aa12.74□□□□□ -0.37
SHPRH-207ENST00000519632 TRAF2Q12933 501 aa12.74□□□□□ -0.37
SHPRH-207ENST00000519632 CCDC117Q8IWD4 279 aaPredicted RBP12.74□□□□□ -0.37
SHPRH-207ENST00000519632 FAM213AQ9BRX8 229 aa12.74□□□□□ -0.37
SHPRH-207ENST00000519632 C1orf50Q9BV19 199 aa12.74□□□□□ -0.37
SHPRH-207ENST00000519632 CDC42BPBQ9Y5S2 1711 aa12.74□□□□□ -0.37
SHPRH-207ENST00000519632 RCCD1A6NED2 376 aa12.74□□□□□ -0.37
SHPRH-207ENST00000519632 AP3B1O00203 1094 aa12.74□□□□□ -0.37
SHPRH-207ENST00000519632 SLC16A4O15374 487 aa12.74□□□□□ -0.37
SHPRH-207ENST00000519632 EYA4O95677 639 aa12.74□□□□□ -0.37
SHPRH-207ENST00000519632 MYBP10242 640 aa12.74□□□□□ -0.37
SHPRH-207ENST00000519632 HLA-DPA1P20036 260 aa12.74□□□□□ -0.37
SHPRH-207ENST00000519632 BNIP1Q12981 228 aa12.74□□□□□ -0.37
SHPRH-207ENST00000519632 REEP2Q9BRK0 252 aa12.74□□□□□ -0.37
SHPRH-207ENST00000519632 DCP1AQ9NPI6 582 aaPredicted RBP12.74□□□□□ -0.37
SHPRH-207ENST00000519632 NRBP2Q9NSY0 501 aa12.74□□□□□ -0.37
SHPRH-207ENST00000519632 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.74□□□□□ -0.37
SHPRH-207ENST00000519632 RSL24D1Q9UHA3 163 aaKnown RBP12.74□□□□□ -0.37
SHPRH-207ENST00000519632 NRKQ7Z2Y5 1582 aa12.74□□□□□ -0.37
SHPRH-207ENST00000519632 APOL1O14791 398 aa12.74□□□□□ -0.37
SHPRH-207ENST00000519632 SCNN1BP51168 640 aa12.74□□□□□ -0.37
SHPRH-207ENST00000519632 ACAP1Q15027 740 aa12.74□□□□□ -0.37
SHPRH-207ENST00000519632 TCP10LQ8TDR4 215 aa12.74□□□□□ -0.37
SHPRH-207ENST00000519632 HMG20AQ9NP66 347 aa12.74□□□□□ -0.37
SHPRH-207ENST00000519632 CIDEBQ9UHD4 219 aa12.74□□□□□ -0.37
SHPRH-207ENST00000519632 GJA3Q9Y6H8 435 aa12.74□□□□□ -0.37
SHPRH-207ENST00000519632 ROBO2Q9HCK4 1378 aa12.74□□□□□ -0.37
SHPRH-207ENST00000519632 FAM237AA0A1B0GTK4 181 aa12.74□□□□□ -0.37
SHPRH-207ENST00000519632 PIK3CDO00329 1044 aa12.74□□□□□ -0.37
SHPRH-207ENST00000519632 UBE3AQ05086 875 aa12.74□□□□□ -0.37
SHPRH-207ENST00000519632 ZNF268Q14587 947 aaPredicted RBP12.74□□□□□ -0.37
SHPRH-207ENST00000519632 NCAPD2Q15021 1401 aa12.74□□□□□ -0.37
SHPRH-207ENST00000519632 MAPK11Q15759 364 aa12.74□□□□□ -0.37
SHPRH-207ENST00000519632 SYDE2Q5VT97 1194 aa12.74□□□□□ -0.37
SHPRH-207ENST00000519632 BBS2Q9BXC9 721 aa12.74□□□□□ -0.37
SHPRH-207ENST00000519632 LOC102724428A0A0B4J2F2 783 aa12.73□□□□□ -0.37
SHPRH-207ENST00000519632 ATP5BP06576 529 aaKnown RBP12.73□□□□□ -0.37
SHPRH-207ENST00000519632 SIK1P57059 783 aa12.73□□□□□ -0.37
SHPRH-207ENST00000519632 DMC1Q14565 340 aa12.73□□□□□ -0.37
SHPRH-207ENST00000519632 NR1D2Q14995 579 aa12.73□□□□□ -0.37
SHPRH-207ENST00000519632 NDUFA5Q16718 116 aa12.73□□□□□ -0.37
SHPRH-207ENST00000519632 TSPAN14Q8NG11 270 aa12.73□□□□□ -0.37
SHPRH-207ENST00000519632 ARHGEF1Q92888 912 aaKnown RBP12.73□□□□□ -0.37
SHPRH-207ENST00000519632 DNAAF2Q9NVR5 837 aaKnown RBP12.73□□□□□ -0.37
SHPRH-207ENST00000519632 PAK5Q9P286 719 aa12.73□□□□□ -0.37
SHPRH-207ENST00000519632 SALL1Q9NSC2 1324 aa12.73□□□□□ -0.37
SHPRH-207ENST00000519632 CLASP2O75122 1294 aaKnown RBP12.73□□□□□ -0.37
SHPRH-207ENST00000519632 EIF2S1P05198 315 aaKnown RBP12.73□□□□□ -0.37
SHPRH-207ENST00000519632 BMP6P22004 513 aa12.73□□□□□ -0.37
SHPRH-207ENST00000519632 ALDH1A3P47895 512 aa12.73□□□□□ -0.37
SHPRH-207ENST00000519632 NFX1Q12986 1120 aaKnown RBP12.73□□□□□ -0.37
SHPRH-207ENST00000519632 CEP78Q5JTW2 689 aa12.73□□□□□ -0.37
SHPRH-207ENST00000519632 WDR59Q6PJI9 974 aa12.73□□□□□ -0.37
SHPRH-207ENST00000519632 KRT27Q7Z3Y8 459 aa12.73□□□□□ -0.37
SHPRH-207ENST00000519632 ILKAPQ9H0C8 392 aaPredicted RBP12.73□□□□□ -0.37
SHPRH-207ENST00000519632 TASP1Q9H6P5 420 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms