RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 VNN2O95498 520 aa7.57□□□□□ -1.2
CTNNA1-216ENST00000519489 JUPP14923 745 aa7.57□□□□□ -1.2
CTNNA1-216ENST00000519489 AKAP5P24588 427 aa7.57□□□□□ -1.2
CTNNA1-216ENST00000519489 TKTP29401 623 aaKnown RBP7.57□□□□□ -1.2
CTNNA1-216ENST00000519489 GJA4P35212 333 aa7.57□□□□□ -1.2
CTNNA1-216ENST00000519489 SEC13P55735 322 aa7.57□□□□□ -1.2
CTNNA1-216ENST00000519489 RUNX3Q13761 415 aa7.57□□□□□ -1.2
CTNNA1-216ENST00000519489 TARBP2Q15633 366 aaKnown RBP7.57□□□□□ -1.2
CTNNA1-216ENST00000519489 UGCGQ16739 394 aa7.57□□□□□ -1.2
CTNNA1-216ENST00000519489 PLEKHG6Q3KR16 790 aa7.57□□□□□ -1.2
CTNNA1-216ENST00000519489 C6orf118Q5T5N4 469 aa7.57□□□□□ -1.2
CTNNA1-216ENST00000519489 GAREM2Q75VX8 874 aa7.57□□□□□ -1.2
CTNNA1-216ENST00000519489 ACDQ96AP0 544 aa7.57□□□□□ -1.2
CTNNA1-216ENST00000519489 ITPKCQ96DU7 683 aa7.57□□□□□ -1.2
CTNNA1-216ENST00000519489 CDC6Q99741 560 aa7.57□□□□□ -1.2
CTNNA1-216ENST00000519489 SDF4Q9BRK5 362 aa7.57□□□□□ -1.2
CTNNA1-216ENST00000519489 DNAJC25Q9H1X3 360 aa7.57□□□□□ -1.2
CTNNA1-216ENST00000519489 NXF3Q9H4D5 531 aaKnown RBP7.57□□□□□ -1.2
CTNNA1-216ENST00000519489 CYP4F11Q9HBI6 524 aa7.57□□□□□ -1.2
CTNNA1-216ENST00000519489 MRS2Q9HD23 443 aa7.57□□□□□ -1.2
CTNNA1-216ENST00000519489 ZDHHC4Q9NPG8 344 aa7.57□□□□□ -1.2
CTNNA1-216ENST00000519489 CD93Q9NPY3 652 aa7.57□□□□□ -1.2
CTNNA1-216ENST00000519489 TM7SF3Q9NS93 570 aa7.57□□□□□ -1.2
CTNNA1-216ENST00000519489 KLK14Q9P0G3 267 aa7.57□□□□□ -1.2
CTNNA1-216ENST00000519489 CCL26Q9Y258 94 aa7.57□□□□□ -1.2
CTNNA1-216ENST00000519489 BACE2Q9Y5Z0 518 aa7.57□□□□□ -1.2
CTNNA1-216ENST00000519489 IGKV6-21A0A0C4DH24 114 aa7.56□□□□□ -1.2
CTNNA1-216ENST00000519489 A0A1W2PQD8 194 aa7.56□□□□□ -1.2
CTNNA1-216ENST00000519489 K7ENP7 123 aa7.56□□□□□ -1.2
CTNNA1-216ENST00000519489 SGK1O00141 431 aa7.56□□□□□ -1.2
CTNNA1-216ENST00000519489 PRRG1O14668 218 aa7.56□□□□□ -1.2
CTNNA1-216ENST00000519489 TNFSF14O43557 240 aa7.56□□□□□ -1.2
CTNNA1-216ENST00000519489 STBD1O95210 358 aa7.56□□□□□ -1.2
CTNNA1-216ENST00000519489 PRKCBP05771 671 aa7.56□□□□□ -1.2
CTNNA1-216ENST00000519489 TMOD1P28289 359 aa7.56□□□□□ -1.2
CTNNA1-216ENST00000519489 RPL6Q02878 288 aaKnown RBP7.56□□□□□ -1.2
CTNNA1-216ENST00000519489 TWF1Q12792 350 aa7.56□□□□□ -1.2
CTNNA1-216ENST00000519489 PSMD2Q13200 908 aa7.56□□□□□ -1.2
CTNNA1-216ENST00000519489 FBXO43Q4G163 708 aa7.56□□□□□ -1.2
CTNNA1-216ENST00000519489 HSP90AB4PQ58FF6 505 aa7.56□□□□□ -1.2
CTNNA1-216ENST00000519489 SLC8B1Q6J4K2 584 aa7.56□□□□□ -1.2
CTNNA1-216ENST00000519489 INO80CQ6PI98 192 aaPredicted RBP7.56□□□□□ -1.2
CTNNA1-216ENST00000519489 TRIML1Q8N9V2 468 aa7.56□□□□□ -1.2
CTNNA1-216ENST00000519489 ZNF461Q8TAF7 563 aa7.56□□□□□ -1.2
CTNNA1-216ENST00000519489 BPIFB1Q8TDL5 484 aa7.56□□□□□ -1.2
CTNNA1-216ENST00000519489 PGBD1Q96JS3 809 aa7.56□□□□□ -1.2
CTNNA1-216ENST00000519489 HSPA12BQ96MM6 686 aa7.56□□□□□ -1.2
CTNNA1-216ENST00000519489 ZSCAN10Q96SZ4 725 aaPredicted RBP7.56□□□□□ -1.2
CTNNA1-216ENST00000519489 EPN3Q9H201 632 aa7.56□□□□□ -1.2
CTNNA1-216ENST00000519489 GAREM1Q9H706 876 aa7.56□□□□□ -1.2
CTNNA1-216ENST00000519489 ZFAND3Q9H8U3 227 aa7.56□□□□□ -1.2
CTNNA1-216ENST00000519489 GABBR1Q9UBS5 961 aa7.56□□□□□ -1.2
CTNNA1-216ENST00000519489 MMP17Q9ULZ9 603 aa7.56□□□□□ -1.2
CTNNA1-216ENST00000519489 SLCO1B1Q9Y6L6 691 aa7.56□□□□□ -1.2
CTNNA1-216ENST00000519489 KNL1Q8NG31 2342 aa7.56□□□□□ -1.2
CTNNA1-216ENST00000519489 BAZ2BQ9UIF8 2168 aaKnown RBP7.56□□□□□ -1.2
CTNNA1-216ENST00000519489 MYH6P13533 1939 aa7.55□□□□□ -1.2
CTNNA1-216ENST00000519489 MEIS1O00470 390 aa7.55□□□□□ -1.2
CTNNA1-216ENST00000519489 PTGESO14684 152 aa7.55□□□□□ -1.2
CTNNA1-216ENST00000519489 EFSO43281 561 aa7.55□□□□□ -1.2
CTNNA1-216ENST00000519489 ADAM23O75077 832 aa7.55□□□□□ -1.2
CTNNA1-216ENST00000519489 CT47B1P0C2W7 299 aaPredicted RBP7.55□□□□□ -1.2
CTNNA1-216ENST00000519489 ZNF883P0CG24 379 aa7.55□□□□□ -1.2
CTNNA1-216ENST00000519489 ATF2P15336 505 aa7.55□□□□□ -1.2
CTNNA1-216ENST00000519489 ACTN2P35609 894 aa7.55□□□□□ -1.2
CTNNA1-216ENST00000519489 DCTP40126 519 aa7.55□□□□□ -1.2
CTNNA1-216ENST00000519489 DPP6P42658 865 aa7.55□□□□□ -1.2
CTNNA1-216ENST00000519489 MCM2P49736 904 aa7.55□□□□□ -1.2
CTNNA1-216ENST00000519489 HLA-BQ31612 363 aa7.55□□□□□ -1.2
CTNNA1-216ENST00000519489 MIS18BP1Q6P0N0 1132 aa7.55□□□□□ -1.2
CTNNA1-216ENST00000519489 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.55□□□□□ -1.2
CTNNA1-216ENST00000519489 MFSD6Q6ZSS7 791 aa7.55□□□□□ -1.2
CTNNA1-216ENST00000519489 HAUS6Q7Z4H7 955 aa7.55□□□□□ -1.2
CTNNA1-216ENST00000519489 MEIOBQ8N635 442 aa7.55□□□□□ -1.2
CTNNA1-216ENST00000519489 ZNF248Q8NDW4 579 aa7.55□□□□□ -1.2
CTNNA1-216ENST00000519489 CRISPLD1Q9H336 500 aa7.55□□□□□ -1.2
CTNNA1-216ENST00000519489 ASAH2Q9NR71 780 aa7.55□□□□□ -1.2
CTNNA1-216ENST00000519489 ECHDC1Q9NTX5 307 aa7.55□□□□□ -1.2
CTNNA1-216ENST00000519489 OBP2AQ9NY56 170 aa7.55□□□□□ -1.2
CTNNA1-216ENST00000519489 SEPT3Q9UH03 358 aa7.55□□□□□ -1.2
CTNNA1-216ENST00000519489 PCDHA6Q9UN73 950 aa7.55□□□□□ -1.2
CTNNA1-216ENST00000519489 PCDHA8Q9Y5H6 950 aa7.55□□□□□ -1.2
CTNNA1-216ENST00000519489 NIPBLQ6KC79 2804 aaeCLIP7.55□□□□□ -1.2
CTNNA1-216ENST00000519489 IGHV1OR15-9A0A0B4J2B8 117 aa7.54□□□□□ -1.2
CTNNA1-216ENST00000519489 KLK10O43240 276 aa7.54□□□□□ -1.2
CTNNA1-216ENST00000519489 UCNP55089 124 aa7.54□□□□□ -1.2
CTNNA1-216ENST00000519489 ARPP19P56211 112 aa7.54□□□□□ -1.2
CTNNA1-216ENST00000519489 SEC23AQ15436 765 aa7.54□□□□□ -1.2
CTNNA1-216ENST00000519489 SKIDA1Q1XH10 827 aa7.54□□□□□ -1.2
CTNNA1-216ENST00000519489 GAB4Q2WGN9 574 aa7.54□□□□□ -1.2
CTNNA1-216ENST00000519489 HES3Q5TGS1 186 aa7.54□□□□□ -1.2
CTNNA1-216ENST00000519489 EMC10Q5UCC4 262 aa7.54□□□□□ -1.2
CTNNA1-216ENST00000519489 FBXL19Q6PCT2 694 aa7.54□□□□□ -1.2
CTNNA1-216ENST00000519489 ZNF410Q86VK4 478 aa7.54□□□□□ -1.2
CTNNA1-216ENST00000519489 RHPN2Q8IUC4 686 aa7.54□□□□□ -1.2
CTNNA1-216ENST00000519489 ALLCQ8N6M5 410 aa7.54□□□□□ -1.2
CTNNA1-216ENST00000519489 C3orf58Q8NDZ4 430 aa7.54□□□□□ -1.2
CTNNA1-216ENST00000519489 HMGB4Q8WW32 186 aa7.54□□□□□ -1.2
CTNNA1-216ENST00000519489 CPB2Q96IY4 423 aa7.54□□□□□ -1.2
CTNNA1-216ENST00000519489 SPACA7Q96KW9 195 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms