RNA–Protein interactions for RNA: ENST00000517904.1

CTNNA1-205, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-205ENST00000517904 SPINK2P20155 84 aa12.32□□□□□ -0.44
CTNNA1-205ENST00000517904 CDC25AP30304 524 aa12.32□□□□□ -0.44
CTNNA1-205ENST00000517904 CDC25CP30307 473 aa12.32□□□□□ -0.44
CTNNA1-205ENST00000517904 NMT1P30419 496 aaKnown RBP12.32□□□□□ -0.44
CTNNA1-205ENST00000517904 NOVA1P51513 510 aaKnown RBP12.32□□□□□ -0.44
CTNNA1-205ENST00000517904 LILRA4P59901 499 aa12.32□□□□□ -0.44
CTNNA1-205ENST00000517904 ANAPC15P60006 121 aa12.32□□□□□ -0.44
CTNNA1-205ENST00000517904 RAD51AP2Q09MP3 1159 aa12.32□□□□□ -0.44
CTNNA1-205ENST00000517904 GRSF1Q12849 480 aaKnown RBP eCLIP12.32□□□□□ -0.44
CTNNA1-205ENST00000517904 PDIA5Q14554 519 aa12.32□□□□□ -0.44
CTNNA1-205ENST00000517904 SLC39A12Q504Y0 691 aa12.32□□□□□ -0.44
CTNNA1-205ENST00000517904 ZPBP2Q6X784 338 aa12.32□□□□□ -0.44
CTNNA1-205ENST00000517904 TMEM150AQ86TG1 271 aa12.32□□□□□ -0.44
CTNNA1-205ENST00000517904 CMTM8Q8IZV2 173 aa12.32□□□□□ -0.44
CTNNA1-205ENST00000517904 CAMKK1Q8N5S9 505 aa12.32□□□□□ -0.44
CTNNA1-205ENST00000517904 SPIRE2Q8WWL2 714 aa12.32□□□□□ -0.44
CTNNA1-205ENST00000517904 SENP8Q96LD8 212 aa12.32□□□□□ -0.44
CTNNA1-205ENST00000517904 MMTAG2Q9BU76 263 aaKnown RBP12.32□□□□□ -0.44
CTNNA1-205ENST00000517904 FOXP1Q9H334 677 aaPredicted RBP12.32□□□□□ -0.44
CTNNA1-205ENST00000517904 HSFX1Q9UBD0 423 aa12.32□□□□□ -0.44
CTNNA1-205ENST00000517904 ABCA7Q8IZY2 2146 aa12.32□□□□□ -0.44
CTNNA1-205ENST00000517904 KIAA1549LQ6ZVL6 1849 aa12.32□□□□□ -0.44
CTNNA1-205ENST00000517904 OBSL1O75147 1896 aa12.31□□□□□ -0.44
CTNNA1-205ENST00000517904 MYO16Q9Y6X6 1858 aa12.31□□□□□ -0.44
CTNNA1-205ENST00000517904 CELSR3Q9NYQ7 3312 aa12.31□□□□□ -0.44
CTNNA1-205ENST00000517904 LNP1A1A4G5 178 aa12.31□□□□□ -0.44
CTNNA1-205ENST00000517904 TOP3BO95985 862 aaKnown RBP12.31□□□□□ -0.44
CTNNA1-205ENST00000517904 ODC1P11926 461 aa12.31□□□□□ -0.44
CTNNA1-205ENST00000517904 PLS3P13797 630 aa12.31□□□□□ -0.44
CTNNA1-205ENST00000517904 ARSAP15289 507 aa12.31□□□□□ -0.44
CTNNA1-205ENST00000517904 GUCY2CP25092 1073 aa12.31□□□□□ -0.44
CTNNA1-205ENST00000517904 U2AF2P26368 475 aaKnown RBP eCLIP12.31□□□□□ -0.44
CTNNA1-205ENST00000517904 CREB5Q02930 508 aa12.31□□□□□ -0.44
CTNNA1-205ENST00000517904 PPP2R3AQ06190 1150 aa12.31□□□□□ -0.44
CTNNA1-205ENST00000517904 ZNF252P-AS1Q0IIN9 211 aa12.31□□□□□ -0.44
CTNNA1-205ENST00000517904 FOXC1Q12948 553 aa12.31□□□□□ -0.44
CTNNA1-205ENST00000517904 PTPAQ15257 358 aa12.31□□□□□ -0.44
CTNNA1-205ENST00000517904 ENOX2Q16206 610 aaKnown RBP12.31□□□□□ -0.44
CTNNA1-205ENST00000517904 IL17AQ16552 155 aa12.31□□□□□ -0.44
CTNNA1-205ENST00000517904 MGAT5BQ3V5L5 792 aa12.31□□□□□ -0.44
CTNNA1-205ENST00000517904 ARMCX5Q6P1M9 558 aa12.31□□□□□ -0.44
CTNNA1-205ENST00000517904 KDF1Q8NAX2 398 aaPredicted RBP12.31□□□□□ -0.44
CTNNA1-205ENST00000517904 GIPC2Q8TF65 315 aa12.31□□□□□ -0.44
CTNNA1-205ENST00000517904 EZH1Q92800 747 aaPredicted RBP12.31□□□□□ -0.44
CTNNA1-205ENST00000517904 USP13Q92995 863 aaPredicted RBP12.31□□□□□ -0.44
CTNNA1-205ENST00000517904 C8orf76Q96K31 380 aa12.31□□□□□ -0.44
CTNNA1-205ENST00000517904 SCN1AP35498 2009 aa12.31□□□□□ -0.44
CTNNA1-205ENST00000517904 ZNF638Q14966 1978 aaKnown RBP12.3□□□□□ -0.44
CTNNA1-205ENST00000517904 BCLAF3A2AJT9 711 aaKnown RBP12.3□□□□□ -0.44
CTNNA1-205ENST00000517904 CAVIN2O95810 425 aa12.3□□□□□ -0.44
CTNNA1-205ENST00000517904 CYP11A1P05108 521 aa12.3□□□□□ -0.44
CTNNA1-205ENST00000517904 ADRB2P07550 413 aa12.3□□□□□ -0.44
CTNNA1-205ENST00000517904 MATR3P43243 847 aaKnown RBP eCLIP12.3□□□□□ -0.443e-8■■■■■ 29.8
CTNNA1-205ENST00000517904 TRAPPC10P48553 1259 aa12.3□□□□□ -0.44
CTNNA1-205ENST00000517904 TUFMP49411 452 aaKnown RBP12.3□□□□□ -0.44
CTNNA1-205ENST00000517904 TOB1P50616 345 aaPredicted RBP12.3□□□□□ -0.44
CTNNA1-205ENST00000517904 GALK1P51570 392 aa12.3□□□□□ -0.44
CTNNA1-205ENST00000517904 VEPH1Q14D04 833 aa12.3□□□□□ -0.44
CTNNA1-205ENST00000517904 SH3PXD2AQ5TCZ1 1133 aa12.3□□□□□ -0.44
CTNNA1-205ENST00000517904 SPATA1Q5VX52 437 aa12.3□□□□□ -0.44
CTNNA1-205ENST00000517904 MAB21L3Q8N8X9 362 aa12.3□□□□□ -0.44
CTNNA1-205ENST00000517904 RPLP0P6Q8NHW5 317 aa12.3□□□□□ -0.44
CTNNA1-205ENST00000517904 GCNAQ96QF7 691 aa12.3□□□□□ -0.44
CTNNA1-205ENST00000517904 ZCWPW1Q9H0M4 648 aa12.3□□□□□ -0.44
CTNNA1-205ENST00000517904 F11P03951 625 aa12.29□□□□□ -0.44
CTNNA1-205ENST00000517904 HMGA1P17096 107 aaKnown RBP12.29□□□□□ -0.44
CTNNA1-205ENST00000517904 DRD1P21728 446 aa12.29□□□□□ -0.44
CTNNA1-205ENST00000517904 GJA4P35212 333 aa12.29□□□□□ -0.44
CTNNA1-205ENST00000517904 AVPR1AP37288 418 aa12.29□□□□□ -0.44
CTNNA1-205ENST00000517904 SMTNP53814 917 aa12.29□□□□□ -0.44
CTNNA1-205ENST00000517904 NLRP12P59046 1061 aa12.29□□□□□ -0.44
CTNNA1-205ENST00000517904 ELF2Q15723 593 aa12.29□□□□□ -0.44
CTNNA1-205ENST00000517904 C9orf57Q5W0N0 161 aa12.29□□□□□ -0.44
CTNNA1-205ENST00000517904 KRT79Q5XKE5 535 aa12.29□□□□□ -0.44
CTNNA1-205ENST00000517904 JADE1Q6IE81 842 aa12.29□□□□□ -0.44
CTNNA1-205ENST00000517904 SYT13Q7L8C5 426 aa12.29□□□□□ -0.44
CTNNA1-205ENST00000517904 LRRTM3Q86VH5 581 aa12.29□□□□□ -0.44
CTNNA1-205ENST00000517904 STKLD1Q8NE28 680 aa12.29□□□□□ -0.44
CTNNA1-205ENST00000517904 FBXO18Q8NFZ0 1043 aa12.29□□□□□ -0.44
CTNNA1-205ENST00000517904 P2RY13Q9BPV8 354 aa12.29□□□□□ -0.44
CTNNA1-205ENST00000517904 TIPINQ9BVW5 301 aa12.29□□□□□ -0.44
CTNNA1-205ENST00000517904 ADAM33Q9BZ11 813 aa12.29□□□□□ -0.44
CTNNA1-205ENST00000517904 TDP1Q9NUW8 608 aa12.29□□□□□ -0.44
CTNNA1-205ENST00000517904 EBF1Q9UH73 591 aa12.29□□□□□ -0.44
CTNNA1-205ENST00000517904 TBX20Q9UMR3 447 aa12.29□□□□□ -0.44
CTNNA1-205ENST00000517904 INVSQ9Y283 1065 aa12.29□□□□□ -0.44
CTNNA1-205ENST00000517904 PCDHB6Q9Y5E3 794 aa12.29□□□□□ -0.44
CTNNA1-205ENST00000517904 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.29□□□□□ -0.44
CTNNA1-205ENST00000517904 STK24Q9Y6E0 443 aa12.29□□□□□ -0.44
CTNNA1-205ENST00000517904 ASCC3Q8N3C0 2202 aaKnown RBP12.29□□□□□ -0.44
CTNNA1-205ENST00000517904 CACNA1EQ15878 2313 aa12.28□□□□□ -0.44
CTNNA1-205ENST00000517904 NPHP3-ACAD11A0A0J9YXS1 232 aa12.28□□□□□ -0.44
CTNNA1-205ENST00000517904 ANO9A1A5B4 782 aa12.28□□□□□ -0.44
CTNNA1-205ENST00000517904 PATE3B3GLJ2 98 aa12.28□□□□□ -0.44
CTNNA1-205ENST00000517904 PIRO00625 290 aa12.28□□□□□ -0.44
CTNNA1-205ENST00000517904 CDX4O14627 284 aaPredicted RBP12.28□□□□□ -0.44
CTNNA1-205ENST00000517904 XPOTO43592 962 aaKnown RBP12.28□□□□□ -0.44
CTNNA1-205ENST00000517904 RHOBTB1O94844 696 aa12.28□□□□□ -0.44
CTNNA1-205ENST00000517904 APBB3O95704 486 aa12.28□□□□□ -0.44
CTNNA1-205ENST00000517904 NFICP08651 508 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms