RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 CALUO43852 315 aaPredicted RBP26.44■■□□□ 1.82
PVT1-204ENST00000517525 ECI2O75521 394 aa26.44■■□□□ 1.82
PVT1-204ENST00000517525 CEBPBP17676 345 aa26.44■■□□□ 1.82
PVT1-204ENST00000517525 MCCD1P59942 119 aaPredicted RBP26.44■■□□□ 1.82
PVT1-204ENST00000517525 ENPEPQ07075 957 aa26.44■■□□□ 1.82
PVT1-204ENST00000517525 POTEHQ6S545 545 aa26.44■■□□□ 1.82
PVT1-204ENST00000517525 TMC8Q8IU68 726 aa26.44■■□□□ 1.82
PVT1-204ENST00000517525 HS6ST3Q8IZP7 471 aa26.44■■□□□ 1.82
PVT1-204ENST00000517525 PLEKHO2Q8TD55 490 aa26.44■■□□□ 1.82
PVT1-204ENST00000517525 TMC2Q8TDI7 906 aa26.44■■□□□ 1.82
PVT1-204ENST00000517525 TCEAL4Q96EI5 215 aa26.44■■□□□ 1.82
PVT1-204ENST00000517525 VRTNQ9H8Y1 702 aa26.44■■□□□ 1.82
PVT1-204ENST00000517525 ABCB6Q9NP58 842 aa26.44■■□□□ 1.82
PVT1-204ENST00000517525 DDX43Q9NXZ2 648 aaKnown RBP26.44■■□□□ 1.82
PVT1-204ENST00000517525 MUC6Q6W4X9 2439 aa26.43■■□□□ 1.82
PVT1-204ENST00000517525 NARSO43776 548 aaKnown RBP26.43■■□□□ 1.82
PVT1-204ENST00000517525 CST3P01034 146 aaPredicted RBP26.43■■□□□ 1.82
PVT1-204ENST00000517525 HAPLN1P10915 354 aaPredicted RBP26.43■■□□□ 1.82
PVT1-204ENST00000517525 PCSK1P29120 753 aa26.43■■□□□ 1.82
PVT1-204ENST00000517525 ATICP31939 592 aa26.43■■□□□ 1.82
PVT1-204ENST00000517525 INTS6LQ5JSJ4 861 aaKnown RBP26.43■■□□□ 1.82
PVT1-204ENST00000517525 DNAJB7Q7Z6W7 309 aaPredicted RBP26.43■■□□□ 1.82
PVT1-204ENST00000517525 ITIH5Q86UX2 942 aa26.43■■□□□ 1.82
PVT1-204ENST00000517525 ADGRF2Q8IZF7 708 aa26.43■■□□□ 1.82
PVT1-204ENST00000517525 TTC9BQ8N6N2 239 aa26.43■■□□□ 1.82
PVT1-204ENST00000517525 SPATA20Q8TB22 786 aa26.43■■□□□ 1.82
PVT1-204ENST00000517525 ING5Q8WYH8 240 aa26.43■■□□□ 1.82
PVT1-204ENST00000517525 RPP25Q9BUL9 199 aaKnown RBP26.43■■□□□ 1.82
PVT1-204ENST00000517525 GPR88Q9GZN0 384 aa26.43■■□□□ 1.82
PVT1-204ENST00000517525 PCDHB5Q9Y5E4 795 aa26.43■■□□□ 1.82
PVT1-204ENST00000517525 TULP1O00294 542 aaPredicted RBP26.42■■□□□ 1.82
PVT1-204ENST00000517525 FGF19O95750 216 aa26.42■■□□□ 1.82
PVT1-204ENST00000517525 PDGFBP01127 241 aaPredicted RBP26.42■■□□□ 1.82
PVT1-204ENST00000517525 COBLL1Q53SF7 1204 aa26.42■■□□□ 1.82
PVT1-204ENST00000517525 OSTM1Q86WC4 334 aa26.42■■□□□ 1.82
PVT1-204ENST00000517525 KBTBD7Q8WVZ9 684 aa26.42■■□□□ 1.82
PVT1-204ENST00000517525 MCRS1Q96EZ8 462 aa26.42■■□□□ 1.82
PVT1-204ENST00000517525 GSDMAQ96QA5 445 aa26.42■■□□□ 1.82
PVT1-204ENST00000517525 PRRX2Q99811 253 aa26.42■■□□□ 1.82
PVT1-204ENST00000517525 GTPBP4Q9BZE4 634 aaKnown RBP26.42■■□□□ 1.82
PVT1-204ENST00000517525 TRPV4Q9HBA0 871 aa26.42■■□□□ 1.82
PVT1-204ENST00000517525 IKBKBO14920 756 aa26.41■■□□□ 1.82
PVT1-204ENST00000517525 TACC1O75410 805 aa26.41■■□□□ 1.82
PVT1-204ENST00000517525 WARSP23381 471 aaKnown RBP26.41■■□□□ 1.82
PVT1-204ENST00000517525 AVPR2P30518 371 aa26.41■■□□□ 1.82
PVT1-204ENST00000517525 CLCN5P51795 746 aa26.41■■□□□ 1.82
PVT1-204ENST00000517525 ZCWPW2Q504Y3 356 aa26.41■■□□□ 1.82
PVT1-204ENST00000517525 FAM171BQ6P995 826 aa26.41■■□□□ 1.82
PVT1-204ENST00000517525 ELSPBP1Q96BH3 223 aa26.41■■□□□ 1.82
PVT1-204ENST00000517525 XYLT2Q9H1B5 865 aa26.41■■□□□ 1.82
PVT1-204ENST00000517525 TMLHEQ9NVH6 421 aa26.41■■□□□ 1.82
PVT1-204ENST00000517525 RMND1Q9NWS8 449 aa26.41■■□□□ 1.82
PVT1-204ENST00000517525 LRRIQ3A6PVS8 624 aaPredicted RBP26.4■■□□□ 1.82
PVT1-204ENST00000517525 C4BPAP04003 597 aaKnown RBP26.4■■□□□ 1.82
PVT1-204ENST00000517525 ATF6P18850 670 aa26.4■■□□□ 1.82
PVT1-204ENST00000517525 CASP4P49662 377 aa26.4■■□□□ 1.82
PVT1-204ENST00000517525 CFAP221Q4G0U5 840 aa26.4■■□□□ 1.82
PVT1-204ENST00000517525 SHKBP1Q8TBC3 707 aa26.4■■□□□ 1.82
PVT1-204ENST00000517525 FUBP3Q96I24 572 aaKnown RBP eCLIP26.4■■□□□ 1.82
PVT1-204ENST00000517525 ASB16Q96NS5 453 aa26.4■■□□□ 1.82
PVT1-204ENST00000517525 FBXL21Q9UKT6 434 aa26.4■■□□□ 1.82
PVT1-204ENST00000517525 CDH9Q9ULB4 789 aa26.4■■□□□ 1.82
PVT1-204ENST00000517525 FRMD4BQ9Y2L6 1034 aa26.4■■□□□ 1.82
PVT1-204ENST00000517525 NRG2O14511 850 aaPredicted RBP26.39■■□□□ 1.82
PVT1-204ENST00000517525 MYL4P12829 197 aa26.39■■□□□ 1.82
PVT1-204ENST00000517525 NPR3P17342 541 aa26.39■■□□□ 1.82
PVT1-204ENST00000517525 FCARP24071 287 aa26.39■■□□□ 1.82
PVT1-204ENST00000517525 RPL13P26373 211 aaKnown RBP26.39■■□□□ 1.82
PVT1-204ENST00000517525 TRPC3Q13507 836 aa26.39■■□□□ 1.82
PVT1-204ENST00000517525 PNOCQ13519 176 aa26.39■■□□□ 1.82
PVT1-204ENST00000517525 VEPH1Q14D04 833 aa26.39■■□□□ 1.82
PVT1-204ENST00000517525 EDRF1Q3B7T1 1238 aa26.39■■□□□ 1.82
PVT1-204ENST00000517525 MGAT5BQ3V5L5 792 aa26.39■■□□□ 1.82
PVT1-204ENST00000517525 SYAP1Q96A49 352 aaPredicted RBP26.39■■□□□ 1.82
PVT1-204ENST00000517525 SEPT5Q99719 369 aaPredicted RBP26.39■■□□□ 1.82
PVT1-204ENST00000517525 HOOK1Q9UJC3 728 aaKnown RBP26.39■■□□□ 1.82
PVT1-204ENST00000517525 SMC2O95347 1197 aa26.38■■□□□ 1.81
PVT1-204ENST00000517525 WEE1P30291 646 aa26.38■■□□□ 1.81
PVT1-204ENST00000517525 PLA2G5P39877 138 aa26.38■■□□□ 1.81
PVT1-204ENST00000517525 FAM78AQ5JUQ0 283 aa26.38■■□□□ 1.81
PVT1-204ENST00000517525 TDRD10Q5VZ19 366 aaKnown RBP26.38■■□□□ 1.81
PVT1-204ENST00000517525 ASTLQ6HA08 431 aaPredicted RBP26.38■■□□□ 1.81
PVT1-204ENST00000517525 SMARCD2Q92925 531 aa26.38■■□□□ 1.81
PVT1-204ENST00000517525 ABI2Q9NYB9 513 aaPredicted RBP26.38■■□□□ 1.81
PVT1-204ENST00000517525 SOAT2O75908 522 aa26.37■■□□□ 1.81
PVT1-204ENST00000517525 CFHP08603 1231 aa26.37■■□□□ 1.81
PVT1-204ENST00000517525 NR2F2P24468 414 aa26.37■■□□□ 1.81
PVT1-204ENST00000517525 VCPP55072 806 aaKnown RBP26.37■■□□□ 1.81
PVT1-204ENST00000517525 MYL6P60660 151 aa26.37■■□□□ 1.81
PVT1-204ENST00000517525 GPC5P78333 572 aa26.37■■□□□ 1.81
PVT1-204ENST00000517525 MAPRE1Q15691 268 aaKnown RBP26.37■■□□□ 1.81
PVT1-204ENST00000517525 WDR72Q3MJ13 1102 aa26.37■■□□□ 1.81
PVT1-204ENST00000517525 ZACNQ401N2 412 aa26.37■■□□□ 1.81
PVT1-204ENST00000517525 TANGO2Q6ICL3 276 aa26.37■■□□□ 1.81
PVT1-204ENST00000517525 PHLDB3Q6NSJ2 640 aa26.37■■□□□ 1.81
PVT1-204ENST00000517525 GAREM2Q75VX8 874 aa26.37■■□□□ 1.81
PVT1-204ENST00000517525 SIX5Q8N196 739 aa26.37■■□□□ 1.81
PVT1-204ENST00000517525 GPR152Q8TDT2 470 aa26.37■■□□□ 1.81
PVT1-204ENST00000517525 E2F7Q96AV8 911 aa26.37■■□□□ 1.81
PVT1-204ENST00000517525 MFSD1Q9H3U5 465 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms