RNA–Protein interactions for RNA: ENST00000517310.5

EFCAB13-202, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 2

Gene EFCAB13, Length 1,477 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-202ENST00000517310 MTF1Q14872 753 aa23.3■■□□□ 1.32
EFCAB13-202ENST00000517310 FAM171A1Q5VUB5 890 aa23.3■■□□□ 1.32
EFCAB13-202ENST00000517310 OVOS1Q6IE37 1185 aa23.3■■□□□ 1.32
EFCAB13-202ENST00000517310 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.3■■□□□ 1.32
EFCAB13-202ENST00000517310 VPS36Q86VN1 386 aa23.3■■□□□ 1.32
EFCAB13-202ENST00000517310 RNF168Q8IYW5 571 aaPredicted RBP23.3■■□□□ 1.32
EFCAB13-202ENST00000517310 ZNF606Q8WXB4 792 aa23.3■■□□□ 1.32
EFCAB13-202ENST00000517310 SPG21Q9NZD8 308 aa23.3■■□□□ 1.32
EFCAB13-202ENST00000517310 LCHNA4D1U4 455 aa23.29■■□□□ 1.32
EFCAB13-202ENST00000517310 THAP12O43422 761 aa23.29■■□□□ 1.32
EFCAB13-202ENST00000517310 PDGFRBP09619 1106 aa23.29■■□□□ 1.32
EFCAB13-202ENST00000517310 CHRNB2P17787 502 aa23.29■■□□□ 1.32
EFCAB13-202ENST00000517310 PPM1AP35813 382 aa23.29■■□□□ 1.32
EFCAB13-202ENST00000517310 KIF11P52732 1056 aa23.29■■□□□ 1.32
EFCAB13-202ENST00000517310 YWHAHQ04917 246 aaPredicted RBP23.29■■□□□ 1.32
EFCAB13-202ENST00000517310 BMS1Q14692 1282 aaKnown RBP23.29■■□□□ 1.32
EFCAB13-202ENST00000517310 ACOT1Q86TX2 421 aa23.29■■□□□ 1.32
EFCAB13-202ENST00000517310 TMEM169Q96HH4 297 aa23.29■■□□□ 1.32
EFCAB13-202ENST00000517310 TNIP3Q96KP6 325 aa23.29■■□□□ 1.32
EFCAB13-202ENST00000517310 HEXIM2Q96MH2 286 aaKnown RBP23.29■■□□□ 1.32
EFCAB13-202ENST00000517310 RTP3Q9BQQ7 232 aa23.29■■□□□ 1.32
EFCAB13-202ENST00000517310 DPEP3Q9H4B8 488 aa23.29■■□□□ 1.32
EFCAB13-202ENST00000517310 PUF60Q9UHX1 559 aaKnown RBP23.29■■□□□ 1.32
EFCAB13-202ENST00000517310 PCDHB12Q9Y5F1 795 aa23.29■■□□□ 1.32
EFCAB13-202ENST00000517310 EPN1Q9Y6I3 576 aaPredicted RBP23.29■■□□□ 1.32
EFCAB13-202ENST00000517310 AKR1B10O60218 316 aa23.28■■□□□ 1.32
EFCAB13-202ENST00000517310 OAZ2O95190 189 aa23.28■■□□□ 1.32
EFCAB13-202ENST00000517310 MMEP08473 750 aa23.28■■□□□ 1.32
EFCAB13-202ENST00000517310 CD19P15391 556 aa23.28■■□□□ 1.32
EFCAB13-202ENST00000517310 TNFAIP3P21580 790 aa23.28■■□□□ 1.32
EFCAB13-202ENST00000517310 BRD2P25440 801 aaKnown RBP23.28■■□□□ 1.32
EFCAB13-202ENST00000517310 PCSK1P29120 753 aa23.28■■□□□ 1.32
EFCAB13-202ENST00000517310 RABGGTBP53611 331 aa23.28■■□□□ 1.32
EFCAB13-202ENST00000517310 FMO1Q01740 532 aa23.28■■□□□ 1.32
EFCAB13-202ENST00000517310 TAF3Q5VWG9 929 aa23.28■■□□□ 1.32
EFCAB13-202ENST00000517310 THEM5Q8N1Q8 247 aa23.28■■□□□ 1.32
EFCAB13-202ENST00000517310 LNX1Q8TBB1 728 aaPredicted RBP23.28■■□□□ 1.32
EFCAB13-202ENST00000517310 TFAP2BQ92481 460 aa23.28■■□□□ 1.32
EFCAB13-202ENST00000517310 ZSWIM1Q9BR11 485 aa23.28■■□□□ 1.32
EFCAB13-202ENST00000517310 ACBD6Q9BR61 282 aa23.28■■□□□ 1.32
EFCAB13-202ENST00000517310 CDH9Q9ULB4 789 aa23.28■■□□□ 1.32
EFCAB13-202ENST00000517310 GBF1Q92538 1859 aa23.28■■□□□ 1.32
EFCAB13-202ENST00000517310 NLRC5Q86WI3 1866 aa23.27■■□□□ 1.32
EFCAB13-202ENST00000517310 DDX3XO00571 662 aaKnown RBP eCLIP23.27■■□□□ 1.32
EFCAB13-202ENST00000517310 MED7O43513 233 aa23.27■■□□□ 1.32
EFCAB13-202ENST00000517310 NDUFA10O95299 355 aa23.27■■□□□ 1.32
EFCAB13-202ENST00000517310 BMP8BP34820 402 aa23.27■■□□□ 1.32
EFCAB13-202ENST00000517310 MRPL58Q14197 206 aaKnown RBP23.27■■□□□ 1.32
EFCAB13-202ENST00000517310 SLC18A3Q16572 532 aa23.27■■□□□ 1.32
EFCAB13-202ENST00000517310 SGO2Q562F6 1265 aa23.27■■□□□ 1.32
EFCAB13-202ENST00000517310 VARS2Q5ST30 1063 aaKnown RBP23.27■■□□□ 1.32
EFCAB13-202ENST00000517310 FAM109BQ6ICB4 259 aaPredicted RBP23.27■■□□□ 1.32
EFCAB13-202ENST00000517310 B3GALNT2Q8NCR0 500 aa23.27■■□□□ 1.32
EFCAB13-202ENST00000517310 SLC30A5Q8TAD4 765 aa23.27■■□□□ 1.32
EFCAB13-202ENST00000517310 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.27■■□□□ 1.32
EFCAB13-202ENST00000517310 VN1R3Q9BXE9 311 aa23.27■■□□□ 1.32
EFCAB13-202ENST00000517310 ADAMTS1Q9UHI8 967 aa23.27■■□□□ 1.32
EFCAB13-202ENST00000517310 GRXCR1A8MXD5 290 aa23.26■■□□□ 1.31
EFCAB13-202ENST00000517310 EIF3CLB5ME19 914 aaKnown RBP23.26■■□□□ 1.31
EFCAB13-202ENST00000517310 LCA5LO95447 670 aa23.26■■□□□ 1.31
EFCAB13-202ENST00000517310 ACAT1P24752 427 aaKnown RBP23.26■■□□□ 1.31
EFCAB13-202ENST00000517310 KIAA0319Q5VV43 1072 aa23.26■■□□□ 1.31
EFCAB13-202ENST00000517310 GLYCTKQ8IVS8 523 aa23.26■■□□□ 1.31
EFCAB13-202ENST00000517310 EIF3CQ99613 913 aaKnown RBP23.26■■□□□ 1.31
EFCAB13-202ENST00000517310 SYT15Q9BQS2 421 aa23.26■■□□□ 1.31
EFCAB13-202ENST00000517310 TTPALQ9BTX7 342 aa23.26■■□□□ 1.31
EFCAB13-202ENST00000517310 SPTLC3Q9NUV7 552 aa23.26■■□□□ 1.31
EFCAB13-202ENST00000517310 PCDHGC3Q9UN70 934 aa23.26■■□□□ 1.31
EFCAB13-202ENST00000517310 RWDD3Q9Y3V2 267 aa23.26■■□□□ 1.31
EFCAB13-202ENST00000517310 A0A087X0T9 212 aa23.25■■□□□ 1.31
EFCAB13-202ENST00000517310 LINC01553A4QN01 128 aa23.25■■□□□ 1.31
EFCAB13-202ENST00000517310 SOD2P04179 222 aa23.25■■□□□ 1.31
EFCAB13-202ENST00000517310 FAM228BP0C875 321 aa23.25■■□□□ 1.31
EFCAB13-202ENST00000517310 PTPN1P18031 435 aaKnown RBP23.25■■□□□ 1.31
EFCAB13-202ENST00000517310 STILQ15468 1287 aa23.25■■□□□ 1.31
EFCAB13-202ENST00000517310 CNGA2Q16280 664 aa23.25■■□□□ 1.31
EFCAB13-202ENST00000517310 USP41Q3LFD5 358 aa23.25■■□□□ 1.31
EFCAB13-202ENST00000517310 ARHGAP17Q68EM7 881 aa23.25■■□□□ 1.31
EFCAB13-202ENST00000517310 TAS1R1Q7RTX1 841 aa23.25■■□□□ 1.31
EFCAB13-202ENST00000517310 DDX53Q86TM3 631 aaKnown RBP23.25■■□□□ 1.31
EFCAB13-202ENST00000517310 CEP57Q86XR8 500 aa23.25■■□□□ 1.31
EFCAB13-202ENST00000517310 C12orf29Q8N999 325 aa23.25■■□□□ 1.31
EFCAB13-202ENST00000517310 HERC2P3Q9BVR0 1158 aa23.25■■□□□ 1.31
EFCAB13-202ENST00000517310 CHST7Q9NS84 486 aa23.25■■□□□ 1.31
EFCAB13-202ENST00000517310 STK39Q9UEW8 545 aa23.25■■□□□ 1.31
EFCAB13-202ENST00000517310 PYCARDQ9ULZ3 195 aa23.25■■□□□ 1.31
EFCAB13-202ENST00000517310 NENFQ9UMX5 172 aa23.25■■□□□ 1.31
EFCAB13-202ENST00000517310 PCDHA11Q9Y5I1 949 aa23.25■■□□□ 1.31
EFCAB13-202ENST00000517310 O00370 1275 aa23.24■■□□□ 1.31
EFCAB13-202ENST00000517310 PSMC1P62191 440 aaKnown RBP23.24■■□□□ 1.31
EFCAB13-202ENST00000517310 PLCB3Q01970 1234 aa23.24■■□□□ 1.31
EFCAB13-202ENST00000517310 GFPT1Q06210 699 aaPredicted RBP23.24■■□□□ 1.31
EFCAB13-202ENST00000517310 INTS6LQ5JSJ4 861 aaKnown RBP23.24■■□□□ 1.31
EFCAB13-202ENST00000517310 RTP2Q5QGT7 225 aa23.24■■□□□ 1.31
EFCAB13-202ENST00000517310 TRIM72Q6ZMU5 477 aa23.24■■□□□ 1.31
EFCAB13-202ENST00000517310 TOGARAM2Q6ZUX3 1019 aa23.24■■□□□ 1.31
EFCAB13-202ENST00000517310 OR10T2Q8NGX3 314 aa23.24■■□□□ 1.31
EFCAB13-202ENST00000517310 PCDHB18PQ96TA0 734 aa23.24■■□□□ 1.31
EFCAB13-202ENST00000517310 CRTAC1Q9NQ79 661 aa23.24■■□□□ 1.31
EFCAB13-202ENST00000517310 SEPT11Q9NVA2 429 aaKnown RBP23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms