RNA–Protein interactions for RNA: ENST00000517097.1

SCARNA3-201, small Cajal body-specific RNA 3, humanhuman

BASIC

Gene SCARNA3, Length 143 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA3-201ENST00000517097 TRAPPC9Q96Q05 1148 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 UIMC1Q96RL1 719 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 MPHOSPH8Q99549 860 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 BAG1Q99933 345 aaPredicted RBP2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 SLF1Q9BQI6 1058 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 REEP2Q9BRK0 252 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 METTL22Q9BUU2 404 aaPredicted RBP2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 OSBPL1AQ9BXW6 950 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 ARHGAP39Q9C0H5 1083 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 TP63Q9H3D4 680 aaPredicted RBP2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 RNPEPQ9H4A4 650 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 ACAD9Q9H845 621 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 CHODLQ9H9P2 273 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 CARS2Q9HA77 564 aaKnown RBP2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 NOD2Q9HC29 1040 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 TLR9Q9NR96 1032 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 LMCD1Q9NZU5 365 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 CEP72Q9P209 647 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 SAE1Q9UBE0 346 aaPredicted RBP2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 ADD3Q9UEY8 706 aaKnown RBP2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 CAPN11Q9UMQ6 739 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 TBX20Q9UMR3 447 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 DTNAQ9Y4J8 743 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 ACTL7AQ9Y615 435 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 CYP46A1Q9Y6A2 500 aa2.88□□□□□ -1.95
SCARNA3-201ENST00000517097 E7EVH7 732 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 H7C0S8 307 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 RAB27BO00194 218 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 WNT10BO00744 389 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 PCDH17O14917 1159 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 GRM6O15303 877 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 PSPNO60542 156 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 KRT38O76015 456 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 UNC5CO95185 931 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 IL18BPO95998 194 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 CYBBP04839 570 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 APOA4P06727 396 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 GRPP07492 148 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 GNAI3P08754 354 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 ACVR2AP27037 513 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 ABCD3P28288 659 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 MAPK4P31152 587 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 CRHR1P34998 444 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 CTNNA1P35221 906 aaKnown RBP2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 KCNC1P48547 511 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 CCT4P50991 539 aaKnown RBP2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 UCP3P55916 312 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 RNASE9P60153 205 aaKnown RBP2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 GNAI1P63096 354 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 DLG4P78352 724 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 POU6F2P78424 691 aaPredicted RBP2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 BECN1Q14457 450 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 SLC29A2Q14542 456 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 ANKRD1Q15327 319 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 BAK1Q16611 211 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 ATP2B3Q16720 1220 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 SLC5A9Q2M3M2 681 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 CR1LQ2VPA4 569 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 PABPC1LQ4VXU2 614 aaKnown RBP2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 EEF1AKMT2Q5JPI9 291 aaKnown RBP2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 HECTD3Q5T447 861 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 LCE3BQ5TA77 95 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 SNX30Q5VWJ9 437 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 KIAA1614Q5VZ46 1190 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 PAQR3Q6TCH7 311 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 TMC5Q6UXY8 1006 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 CXXC5Q7LFL8 322 aaKnown RBP2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 ANKS1BQ7Z6G8 1248 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 MIB1Q86YT6 1006 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 SPPL2CQ8IUH8 684 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 PLXDC1Q8IUK5 500 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 CCDC28AQ8IWP9 274 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 BCL6BQ8N143 479 aaPredicted RBP2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 CHCHD4Q8N4Q1 142 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 DTX3Q8N9I9 347 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 REPS2Q8NFH8 660 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 CPT1CQ8TCG5 803 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 SSH3Q8TE77 659 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 RSC1A1Q92681 617 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 GOLGA1Q92805 767 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 NKD2Q969F2 451 aaPredicted RBP2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 C3orf49Q96BT1 292 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 RNF125Q96EQ8 232 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 WDR92Q96MX6 357 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 ALPK1Q96QP1 1244 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 RBM15Q96T37 977 aaKnown RBP eCLIP2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 TACO1Q9BSH4 297 aaKnown RBP2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 TXLNGYQ9BZA5 131 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 MS4A7Q9GZW8 240 aaPredicted RBP2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 C11orf54Q9H0W9 315 aaPredicted RBP2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 ABHD16BQ9H3Z7 469 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 EPS8L2Q9H6S3 715 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 TNFRSF12AQ9NP84 129 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 DLL4Q9NR61 685 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 GPRC5DQ9NZD1 345 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 SLAMF8Q9P0V8 285 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 ARHGAP20Q9P2F6 1191 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 PI4KBQ9UBF8 816 aa2.87□□□□□ -1.95
SCARNA3-201ENST00000517097 CFDP1Q9UEE9 299 aaPredicted RBP2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms