RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 ACSF2Q96CM8 615 aaPredicted RBP11.95□□□□□ -0.5
SCARNA20-201ENST00000516768 ZNF512Q96ME7 567 aaPredicted RBP11.95□□□□□ -0.5
SCARNA20-201ENST00000516768 CEP63Q96MT8 703 aa11.95□□□□□ -0.5
SCARNA20-201ENST00000516768 PKMYT1Q99640 499 aa11.95□□□□□ -0.5
SCARNA20-201ENST00000516768 CRISPLD1Q9H336 500 aa11.95□□□□□ -0.5
SCARNA20-201ENST00000516768 AVENQ9NQS1 362 aaPredicted RBP11.95□□□□□ -0.5
SCARNA20-201ENST00000516768 CEP72Q9P209 647 aa11.95□□□□□ -0.5
SCARNA20-201ENST00000516768 NXF1Q9UBU9 619 aaKnown RBP11.95□□□□□ -0.5
SCARNA20-201ENST00000516768 LIMD1Q9UGP4 676 aa11.95□□□□□ -0.5
SCARNA20-201ENST00000516768 GTF3C4Q9UKN8 822 aa11.95□□□□□ -0.5
SCARNA20-201ENST00000516768 POLIQ9UNA4 740 aa11.95□□□□□ -0.5
SCARNA20-201ENST00000516768 MUC3AQ02505 3323 aa11.95□□□□□ -0.5
SCARNA20-201ENST00000516768 CLUHO75153 1309 aa11.94□□□□□ -0.5
SCARNA20-201ENST00000516768 STX10O60499 249 aa11.94□□□□□ -0.5
SCARNA20-201ENST00000516768 ASS1P00966 412 aaKnown RBP11.94□□□□□ -0.5
SCARNA20-201ENST00000516768 HLA-DRAP01903 254 aa11.94□□□□□ -0.5
SCARNA20-201ENST00000516768 PDGFRBP09619 1106 aa11.94□□□□□ -0.5
SCARNA20-201ENST00000516768 TRIM49P0CI25 452 aa11.94□□□□□ -0.5
SCARNA20-201ENST00000516768 TRIM49CP0CI26 452 aa11.94□□□□□ -0.5
SCARNA20-201ENST00000516768 SP100P23497 879 aaPredicted RBP11.94□□□□□ -0.5
SCARNA20-201ENST00000516768 ACAT1P24752 427 aaKnown RBP11.94□□□□□ -0.5
SCARNA20-201ENST00000516768 TNNC1P63316 161 aa11.94□□□□□ -0.5
SCARNA20-201ENST00000516768 NTHL1P78549 312 aa11.94□□□□□ -0.5
SCARNA20-201ENST00000516768 TSPY1Q01534 308 aa11.94□□□□□ -0.5
SCARNA20-201ENST00000516768 TWF1Q12792 350 aa11.94□□□□□ -0.5
SCARNA20-201ENST00000516768 PAK1Q13153 545 aa11.94□□□□□ -0.5
SCARNA20-201ENST00000516768 NFE2Q16621 373 aaPredicted RBP11.94□□□□□ -0.5
SCARNA20-201ENST00000516768 ZNF667Q5HYK9 610 aa11.94□□□□□ -0.5
SCARNA20-201ENST00000516768 KRT39Q6A163 491 aa11.94□□□□□ -0.5
SCARNA20-201ENST00000516768 FRMD5Q7Z6J6 570 aa11.94□□□□□ -0.5
SCARNA20-201ENST00000516768 SPPL2BQ8TCT7 592 aa11.94□□□□□ -0.5
SCARNA20-201ENST00000516768 NUP62CLQ9H1M0 184 aa11.94□□□□□ -0.5
SCARNA20-201ENST00000516768 METTL14Q9HCE5 456 aaKnown RBP11.94□□□□□ -0.5
SCARNA20-201ENST00000516768 TMEM8AQ9HCN3 771 aa11.94□□□□□ -0.5
SCARNA20-201ENST00000516768 TMLHEQ9NVH6 421 aa11.94□□□□□ -0.5
SCARNA20-201ENST00000516768 HCFC1R1Q9NWW0 138 aa11.94□□□□□ -0.5
SCARNA20-201ENST00000516768 ARMCX3Q9UH62 379 aaPredicted RBP11.94□□□□□ -0.5
SCARNA20-201ENST00000516768 CDH9Q9ULB4 789 aa11.94□□□□□ -0.5
SCARNA20-201ENST00000516768 BDP1A6H8Y1 2624 aa11.93□□□□□ -0.5
SCARNA20-201ENST00000516768 CUL9Q8IWT3 2517 aa11.93□□□□□ -0.5
SCARNA20-201ENST00000516768 MYBPHLA2RUH7 354 aa11.93□□□□□ -0.5
SCARNA20-201ENST00000516768 HCRTO43612 131 aa11.93□□□□□ -0.5
SCARNA20-201ENST00000516768 ATP2C2O75185 946 aa11.93□□□□□ -0.5
SCARNA20-201ENST00000516768 MICAL2O94851 1124 aa11.93□□□□□ -0.5
SCARNA20-201ENST00000516768 RHOP08100 348 aa11.93□□□□□ -0.5
SCARNA20-201ENST00000516768 HAPLN1P10915 354 aaPredicted RBP11.93□□□□□ -0.5
SCARNA20-201ENST00000516768 LAMP2P13473 410 aa11.93□□□□□ -0.5
SCARNA20-201ENST00000516768 ALADP13716 330 aa11.93□□□□□ -0.5
SCARNA20-201ENST00000516768 FSHRP23945 695 aa11.93□□□□□ -0.5
SCARNA20-201ENST00000516768 ALDH1A3P47895 512 aa11.93□□□□□ -0.5
SCARNA20-201ENST00000516768 CDR1P51861 262 aa11.93□□□□□ -0.5
SCARNA20-201ENST00000516768 EPHB3P54753 998 aa11.93□□□□□ -0.5
SCARNA20-201ENST00000516768 CDH8P55286 799 aa11.93□□□□□ -0.5
SCARNA20-201ENST00000516768 STX17P56962 302 aa11.93□□□□□ -0.5
SCARNA20-201ENST00000516768 ZNF699Q32M78 642 aa11.93□□□□□ -0.5
SCARNA20-201ENST00000516768 PABPC1LQ4VXU2 614 aaKnown RBP11.93□□□□□ -0.5
SCARNA20-201ENST00000516768 INTS6LQ5JSJ4 861 aaKnown RBP11.93□□□□□ -0.5
SCARNA20-201ENST00000516768 IQCEQ6IPM2 695 aa11.93□□□□□ -0.5
SCARNA20-201ENST00000516768 ELMOD1Q8N336 334 aa11.93□□□□□ -0.5
SCARNA20-201ENST00000516768 TTC9BQ8N6N2 239 aa11.93□□□□□ -0.5
SCARNA20-201ENST00000516768 OR6B3Q8NGW1 331 aa11.93□□□□□ -0.5
SCARNA20-201ENST00000516768 TAS1R2Q8TE23 839 aa11.93□□□□□ -0.5
SCARNA20-201ENST00000516768 ELMO3Q96BJ8 720 aa11.93□□□□□ -0.5
SCARNA20-201ENST00000516768 MED15Q96RN5 788 aa11.93□□□□□ -0.5
SCARNA20-201ENST00000516768 MYADMQ96S97 322 aa11.93□□□□□ -0.5
SCARNA20-201ENST00000516768 MRPL45Q9BRJ2 306 aaKnown RBP11.93□□□□□ -0.5
SCARNA20-201ENST00000516768 SRRTQ9BXP5 876 aaKnown RBP11.93□□□□□ -0.5
SCARNA20-201ENST00000516768 DNAJC25Q9H1X3 360 aa11.93□□□□□ -0.5
SCARNA20-201ENST00000516768 SNX25Q9H3E2 840 aa11.93□□□□□ -0.5
SCARNA20-201ENST00000516768 EPS15L1Q9UBC2 864 aa11.93□□□□□ -0.5
SCARNA20-201ENST00000516768 RWDD2AQ9UIY3 292 aa11.93□□□□□ -0.5
SCARNA20-201ENST00000516768 COQ4Q9Y3A0 265 aa11.93□□□□□ -0.5
SCARNA20-201ENST00000516768 ASB3Q9Y575 518 aa11.93□□□□□ -0.5
SCARNA20-201ENST00000516768 PCDHB5Q9Y5E4 795 aa11.93□□□□□ -0.5
SCARNA20-201ENST00000516768 ZFP37Q9Y6Q3 630 aaPredicted RBP11.93□□□□□ -0.5
SCARNA20-201ENST00000516768 DOCK6Q96HP0 2047 aa11.93□□□□□ -0.5
SCARNA20-201ENST00000516768 ZNF197O14709 1029 aa11.92□□□□□ -0.5
SCARNA20-201ENST00000516768 PMM2O15305 246 aa11.92□□□□□ -0.5
SCARNA20-201ENST00000516768 LRRN2O75325 713 aa11.92□□□□□ -0.5
SCARNA20-201ENST00000516768 FGFR1OPO95684 399 aaKnown RBP11.92□□□□□ -0.5
SCARNA20-201ENST00000516768 P4HA1P13674 534 aa11.92□□□□□ -0.5
SCARNA20-201ENST00000516768 PTPN1P18031 435 aaKnown RBP11.92□□□□□ -0.5
SCARNA20-201ENST00000516768 GBP2P32456 591 aaPredicted RBP11.92□□□□□ -0.5
SCARNA20-201ENST00000516768 EPHA5P54756 1037 aa11.92□□□□□ -0.5
SCARNA20-201ENST00000516768 MARSP56192 900 aaKnown RBP11.92□□□□□ -0.5
SCARNA20-201ENST00000516768 PLD1Q13393 1074 aa11.92□□□□□ -0.5
SCARNA20-201ENST00000516768 MAPRE1Q15691 268 aaKnown RBP11.92□□□□□ -0.5
SCARNA20-201ENST00000516768 CFAP221Q4G0U5 840 aa11.92□□□□□ -0.5
SCARNA20-201ENST00000516768 CYP4A22Q5TCH4 519 aa11.92□□□□□ -0.5
SCARNA20-201ENST00000516768 DNAJB7Q7Z6W7 309 aaPredicted RBP11.92□□□□□ -0.5
SCARNA20-201ENST00000516768 TDRD5Q8NAT2 981 aaKnown RBP11.92□□□□□ -0.5
SCARNA20-201ENST00000516768 FBXL13Q8NEE6 735 aa11.92□□□□□ -0.5
SCARNA20-201ENST00000516768 ITFG1Q8TB96 612 aa11.92□□□□□ -0.5
SCARNA20-201ENST00000516768 SEMA4DQ92854 862 aa11.92□□□□□ -0.5
SCARNA20-201ENST00000516768 FGF13Q92913 245 aa11.92□□□□□ -0.5
SCARNA20-201ENST00000516768 SLC35C1Q96A29 364 aa11.92□□□□□ -0.5
SCARNA20-201ENST00000516768 FAXDC2Q96IV6 333 aa11.92□□□□□ -0.5
SCARNA20-201ENST00000516768 CORO1BQ9BR76 489 aa11.92□□□□□ -0.5
SCARNA20-201ENST00000516768 PI4K2AQ9BTU6 479 aa11.92□□□□□ -0.5
SCARNA20-201ENST00000516768 LRRC3Q9BY71 257 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms