RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 EHD3Q9NZN3 535 aa-0.09□□□□□ -2.42
RNU6-539P-201ENST00000516665 LRP2BPQ9P2M1 347 aa-0.09□□□□□ -2.42
RNU6-539P-201ENST00000516665 NR2E3Q9Y5X4 410 aa-0.09□□□□□ -2.42
RNU6-539P-201ENST00000516665 ITGB4P16144 1822 aa-0.09□□□□□ -2.42
RNU6-539P-201ENST00000516665 KLLNB2CW77 178 aa-0.1□□□□□ -2.43
RNU6-539P-201ENST00000516665 H7C1Q1 480 aa-0.1□□□□□ -2.43
RNU6-539P-201ENST00000516665 NDUFB8O95169 186 aa-0.1□□□□□ -2.43
RNU6-539P-201ENST00000516665 AMBPP02760 352 aa-0.1□□□□□ -2.43
RNU6-539P-201ENST00000516665 CHRM5P08912 532 aaPredicted RBP-0.1□□□□□ -2.43
RNU6-539P-201ENST00000516665 FLT3LGP49771 235 aa-0.1□□□□□ -2.43
RNU6-539P-201ENST00000516665 BCAR1P56945 870 aa-0.1□□□□□ -2.43
RNU6-539P-201ENST00000516665 RPS7P62081 194 aaKnown RBP-0.1□□□□□ -2.43
RNU6-539P-201ENST00000516665 FPGSQ05932 587 aa-0.1□□□□□ -2.43
RNU6-539P-201ENST00000516665 PMS2P11Q13670 270 aa-0.1□□□□□ -2.43
RNU6-539P-201ENST00000516665 SV2CQ496J9 727 aa-0.1□□□□□ -2.43
RNU6-539P-201ENST00000516665 ANO6Q4KMQ2 910 aa-0.1□□□□□ -2.43
RNU6-539P-201ENST00000516665 WASHC2DQ5SRD0 308 aa-0.1□□□□□ -2.43
RNU6-539P-201ENST00000516665 EGFLAMQ63HQ2 1017 aa-0.1□□□□□ -2.43
RNU6-539P-201ENST00000516665 STYK1Q6J9G0 422 aa-0.1□□□□□ -2.43
RNU6-539P-201ENST00000516665 ANKRD16Q6P6B7 361 aa-0.1□□□□□ -2.43
RNU6-539P-201ENST00000516665 ESPNLQ6ZVH7 1005 aa-0.1□□□□□ -2.43
RNU6-539P-201ENST00000516665 C16orf59Q7L2K0 433 aa-0.1□□□□□ -2.43
RNU6-539P-201ENST00000516665 ADGRG5Q8IZF4 528 aa-0.1□□□□□ -2.43
RNU6-539P-201ENST00000516665 Q8N7P7 452 aa-0.1□□□□□ -2.43
RNU6-539P-201ENST00000516665 PJA1Q8NG27 643 aa-0.1□□□□□ -2.43
RNU6-539P-201ENST00000516665 OSR1Q8TAX0 266 aaPredicted RBP-0.1□□□□□ -2.43
RNU6-539P-201ENST00000516665 TAS1R2Q8TE23 839 aa-0.1□□□□□ -2.43
RNU6-539P-201ENST00000516665 SCMH1Q96GD3 660 aa-0.1□□□□□ -2.43
RNU6-539P-201ENST00000516665 SNX27Q96L92 541 aa-0.1□□□□□ -2.43
RNU6-539P-201ENST00000516665 PNKPQ96T60 521 aa-0.1□□□□□ -2.43
RNU6-539P-201ENST00000516665 CTRCQ99895 268 aa-0.1□□□□□ -2.43
RNU6-539P-201ENST00000516665 NOL10Q9BSC4 688 aaKnown RBP-0.1□□□□□ -2.43
RNU6-539P-201ENST00000516665 RTBDNQ9BSG5 229 aaPredicted RBP-0.1□□□□□ -2.43
RNU6-539P-201ENST00000516665 CDK19Q9BWU1 502 aa-0.1□□□□□ -2.43
RNU6-539P-201ENST00000516665 UNKQ9C0B0 810 aaKnown RBP-0.1□□□□□ -2.43
RNU6-539P-201ENST00000516665 TINAGL1Q9GZM7 467 aaPredicted RBP-0.1□□□□□ -2.43
RNU6-539P-201ENST00000516665 RBM38Q9H0Z9 239 aaKnown RBP-0.1□□□□□ -2.43
RNU6-539P-201ENST00000516665 CDT1Q9H211 546 aa-0.1□□□□□ -2.43
RNU6-539P-201ENST00000516665 FBXO34Q9NWN3 711 aa-0.1□□□□□ -2.43
RNU6-539P-201ENST00000516665 PARP2Q9UGN5 583 aa-0.1□□□□□ -2.43
RNU6-539P-201ENST00000516665 LIMCH1Q9UPQ0 1083 aa-0.1□□□□□ -2.43
RNU6-539P-201ENST00000516665 DTX4Q9Y2E6 619 aa-0.1□□□□□ -2.43
RNU6-539P-201ENST00000516665 COL5A2P05997 1499 aaPredicted RBP-0.1□□□□□ -2.43
RNU6-539P-201ENST00000516665 TMEM272A0A1B0GTI8 110 aa-0.11□□□□□ -2.43
RNU6-539P-201ENST00000516665 A0A1W2PR48 441 aa-0.11□□□□□ -2.43
RNU6-539P-201ENST00000516665 PLSCR5A0PG75 271 aa-0.11□□□□□ -2.43
RNU6-539P-201ENST00000516665 ADCY6O43306 1168 aa-0.11□□□□□ -2.43
RNU6-539P-201ENST00000516665 SNRPA1P09661 255 aaKnown RBP-0.11□□□□□ -2.43
RNU6-539P-201ENST00000516665 POLD2P49005 469 aa-0.11□□□□□ -2.43
RNU6-539P-201ENST00000516665 LACTBP83111 547 aaPredicted RBP-0.11□□□□□ -2.43
RNU6-539P-201ENST00000516665 MC2RQ01718 297 aa-0.11□□□□□ -2.43
RNU6-539P-201ENST00000516665 PAK1Q13153 545 aa-0.11□□□□□ -2.43
RNU6-539P-201ENST00000516665 PSMD2Q13200 908 aa-0.11□□□□□ -2.43
RNU6-539P-201ENST00000516665 BMPR2Q13873 1038 aa-0.11□□□□□ -2.43
RNU6-539P-201ENST00000516665 CRY1Q16526 586 aa-0.11□□□□□ -2.43
RNU6-539P-201ENST00000516665 KIRREL2Q6UWL6 708 aa-0.11□□□□□ -2.43
RNU6-539P-201ENST00000516665 STXBP4Q6ZWJ1 553 aa-0.11□□□□□ -2.43
RNU6-539P-201ENST00000516665 KANSL1Q7Z3B3 1105 aa-0.11□□□□□ -2.43
RNU6-539P-201ENST00000516665 DRC7Q8IY82 874 aa-0.11□□□□□ -2.43
RNU6-539P-201ENST00000516665 CHPFQ8IZ52 775 aa-0.11□□□□□ -2.43
RNU6-539P-201ENST00000516665 LINC00612Q8N6U2 182 aa-0.11□□□□□ -2.43
RNU6-539P-201ENST00000516665 RPGRQ92834 1020 aaKnown RBP-0.11□□□□□ -2.43
RNU6-539P-201ENST00000516665 FKBP10Q96AY3 582 aa-0.11□□□□□ -2.43
RNU6-539P-201ENST00000516665 FBXO17Q96EF6 278 aa-0.11□□□□□ -2.43
RNU6-539P-201ENST00000516665 SEZ6LQ9BYH1 1024 aa-0.11□□□□□ -2.43
RNU6-539P-201ENST00000516665 DDX31Q9H8H2 851 aaKnown RBP-0.11□□□□□ -2.43
RNU6-539P-201ENST00000516665 DDX43Q9NXZ2 648 aaKnown RBP-0.11□□□□□ -2.43
RNU6-539P-201ENST00000516665 ABCA7Q8IZY2 2146 aa-0.11□□□□□ -2.43
RNU6-539P-201ENST00000516665 TCRBV5S1A1TA0A578 114 aa-0.12□□□□□ -2.43
RNU6-539P-201ENST00000516665 UBA6A0AVT1 1052 aaPredicted RBP-0.12□□□□□ -2.43
RNU6-539P-201ENST00000516665 MEIOCA2RUB1 952 aa-0.12□□□□□ -2.43
RNU6-539P-201ENST00000516665 CCDC66A2RUB6 948 aa-0.12□□□□□ -2.43
RNU6-539P-201ENST00000516665 QSOX1O00391 747 aa-0.12□□□□□ -2.43
RNU6-539P-201ENST00000516665 NFATC1O95644 943 aa-0.12□□□□□ -2.43
RNU6-539P-201ENST00000516665 FCER1AP12319 257 aa-0.12□□□□□ -2.43
RNU6-539P-201ENST00000516665 CYP2C18P33260 490 aa-0.12□□□□□ -2.43
RNU6-539P-201ENST00000516665 RPS13P62277 151 aaKnown RBP-0.12□□□□□ -2.43
RNU6-539P-201ENST00000516665 PMP22Q01453 160 aa-0.12□□□□□ -2.43
RNU6-539P-201ENST00000516665 ARL16Q0P5N6 197 aa-0.12□□□□□ -2.43
RNU6-539P-201ENST00000516665 ST3GAL1Q11201 340 aa-0.12□□□□□ -2.43
RNU6-539P-201ENST00000516665 DYRK1AQ13627 763 aa-0.12□□□□□ -2.43
RNU6-539P-201ENST00000516665 PPP2R5EQ16537 467 aa-0.12□□□□□ -2.43
RNU6-539P-201ENST00000516665 FAM47AQ5JRC9 791 aa-0.12□□□□□ -2.43
RNU6-539P-201ENST00000516665 TTC38Q5R3I4 469 aa-0.12□□□□□ -2.43
RNU6-539P-201ENST00000516665 ZC2HC1BQ5TFG8 222 aa-0.12□□□□□ -2.43
RNU6-539P-201ENST00000516665 FAM83HQ6ZRV2 1179 aaPredicted RBP-0.12□□□□□ -2.43
RNU6-539P-201ENST00000516665 MARK2Q7KZI7 788 aaKnown RBP-0.12□□□□□ -2.43
RNU6-539P-201ENST00000516665 CLNKQ7Z7G1 428 aa-0.12□□□□□ -2.43
RNU6-539P-201ENST00000516665 KRTAP13-1Q8IUC0 172 aa-0.12□□□□□ -2.43
RNU6-539P-201ENST00000516665 TMEM199Q8N511 208 aa-0.12□□□□□ -2.43
RNU6-539P-201ENST00000516665 CISD2Q8N5K1 135 aaKnown RBP-0.12□□□□□ -2.43
RNU6-539P-201ENST00000516665 E2F7Q96AV8 911 aa-0.12□□□□□ -2.43
RNU6-539P-201ENST00000516665 SF3B5Q9BWJ5 86 aaKnown RBP-0.12□□□□□ -2.43
RNU6-539P-201ENST00000516665 ABHD16BQ9H3Z7 469 aa-0.12□□□□□ -2.43
RNU6-539P-201ENST00000516665 PODXL2Q9NZ53 605 aa-0.12□□□□□ -2.43
RNU6-539P-201ENST00000516665 CTTNBP2NLQ9P2B4 639 aa-0.12□□□□□ -2.43
RNU6-539P-201ENST00000516665 G3BP2Q9UN86 482 aaKnown RBP-0.12□□□□□ -2.43
RNU6-539P-201ENST00000516665 ZHX2Q9Y6X8 837 aa-0.12□□□□□ -2.43
RNU6-539P-201ENST00000516665 ATRNL1Q5VV63 1379 aa-0.12□□□□□ -2.43
RNU6-539P-201ENST00000516665 LOC102724159A0A0B4J2E5 919 aa-0.13□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms