RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 INCA1Q0VD86 236 aa12.72□□□□□ -0.37
SNF8-215ENST00000515572 IQCB1Q15051 598 aa12.72□□□□□ -0.37
SNF8-215ENST00000515572 NFE2Q16621 373 aaPredicted RBP12.72□□□□□ -0.37
SNF8-215ENST00000515572 AAK1Q2M2I8 961 aa12.72□□□□□ -0.37
SNF8-215ENST00000515572 UVSSAQ2YD98 709 aa12.72□□□□□ -0.37
SNF8-215ENST00000515572 INTS6LQ5JSJ4 861 aaKnown RBP12.72□□□□□ -0.37
SNF8-215ENST00000515572 MIIPQ5JXC2 388 aa12.72□□□□□ -0.37
SNF8-215ENST00000515572 LRSAM1Q6UWE0 723 aa12.72□□□□□ -0.37
SNF8-215ENST00000515572 CYP26C1Q6V0L0 522 aa12.72□□□□□ -0.37
SNF8-215ENST00000515572 SCARA5Q6ZMJ2 495 aa12.72□□□□□ -0.37
SNF8-215ENST00000515572 UNC93AQ86WB7 457 aa12.72□□□□□ -0.37
SNF8-215ENST00000515572 OSTM1Q86WC4 334 aa12.72□□□□□ -0.37
SNF8-215ENST00000515572 EHBP1Q8NDI1 1231 aa12.72□□□□□ -0.37
SNF8-215ENST00000515572 LMO3Q8TAP4 145 aa12.72□□□□□ -0.37
SNF8-215ENST00000515572 MSLNLQ96KJ4 702 aa12.72□□□□□ -0.37
SNF8-215ENST00000515572 FAM81BQ96LP2 452 aa12.72□□□□□ -0.37
SNF8-215ENST00000515572 NT5C1BQ96P26 610 aa12.72□□□□□ -0.37
SNF8-215ENST00000515572 SYT15Q9BQS2 421 aa12.72□□□□□ -0.37
SNF8-215ENST00000515572 MRPL45Q9BRJ2 306 aaKnown RBP12.72□□□□□ -0.37
SNF8-215ENST00000515572 ZDHHC7Q9NXF8 308 aa12.72□□□□□ -0.37
SNF8-215ENST00000515572 GCNT4Q9P109 453 aa12.72□□□□□ -0.37
SNF8-215ENST00000515572 CLEC1BQ9P126 229 aa12.72□□□□□ -0.37
SNF8-215ENST00000515572 THEGQ9P2T0 379 aa12.72□□□□□ -0.37
SNF8-215ENST00000515572 LIMA1Q9UHB6 759 aaKnown RBP12.72□□□□□ -0.37
SNF8-215ENST00000515572 BARX2Q9UMQ3 279 aaPredicted RBP12.72□□□□□ -0.37
SNF8-215ENST00000515572 PTPRDP23468 1912 aa12.71□□□□□ -0.37
SNF8-215ENST00000515572 LRRC10BA6NIK2 292 aa12.71□□□□□ -0.37
SNF8-215ENST00000515572 A8MXQ7 604 aa12.71□□□□□ -0.37
SNF8-215ENST00000515572 PRRG1O14668 218 aa12.71□□□□□ -0.37
SNF8-215ENST00000515572 LRRN2O75325 713 aa12.71□□□□□ -0.37
SNF8-215ENST00000515572 ZMYND10O75800 440 aa12.71□□□□□ -0.37
SNF8-215ENST00000515572 PAPLNO95428 1278 aa12.71□□□□□ -0.37
SNF8-215ENST00000515572 HNRNPA1P09651 372 aaKnown RBP eCLIP12.71□□□□□ -0.37
SNF8-215ENST00000515572 WEE2P0C1S8 567 aa12.71□□□□□ -0.37
SNF8-215ENST00000515572 OR4Q2P0C623 313 aa12.71□□□□□ -0.37
SNF8-215ENST00000515572 SPATA31D3P0C874 917 aa12.71□□□□□ -0.37
SNF8-215ENST00000515572 KCNA5P22460 613 aa12.71□□□□□ -0.37
SNF8-215ENST00000515572 ACAT1P24752 427 aaKnown RBP12.71□□□□□ -0.37
SNF8-215ENST00000515572 RAP1GAPP47736 663 aa12.71□□□□□ -0.37
SNF8-215ENST00000515572 CDH8P55286 799 aa12.71□□□□□ -0.37
SNF8-215ENST00000515572 ZNF445P59923 1031 aa12.71□□□□□ -0.37
SNF8-215ENST00000515572 YWHAEP62258 255 aaKnown RBP12.71□□□□□ -0.37
SNF8-215ENST00000515572 RBM10P98175 930 aaKnown RBP12.71□□□□□ -0.37
SNF8-215ENST00000515572 ITIH3Q06033 890 aa12.71□□□□□ -0.37
SNF8-215ENST00000515572 DLX2Q07687 328 aaPredicted RBP12.71□□□□□ -0.37
SNF8-215ENST00000515572 ADCY1Q08828 1119 aa12.71□□□□□ -0.37
SNF8-215ENST00000515572 CUL2Q13617 745 aa12.71□□□□□ -0.37
SNF8-215ENST00000515572 KRT31Q15323 416 aa12.71□□□□□ -0.37
SNF8-215ENST00000515572 PUS10Q3MIT2 529 aaKnown RBP12.71□□□□□ -0.37
SNF8-215ENST00000515572 SLC39A12Q504Y0 691 aa12.71□□□□□ -0.37
SNF8-215ENST00000515572 FKBP15Q5T1M5 1219 aa12.71□□□□□ -0.37
SNF8-215ENST00000515572 CES5AQ6NT32 575 aa12.71□□□□□ -0.37
SNF8-215ENST00000515572 RNF19BQ6ZMZ0 732 aa12.71□□□□□ -0.37
SNF8-215ENST00000515572 SPATA31D4Q6ZUB0 917 aa12.71□□□□□ -0.37
SNF8-215ENST00000515572 TCEAL8Q8IYN2 117 aa12.71□□□□□ -0.37
SNF8-215ENST00000515572 CMASQ8NFW8 434 aaPredicted RBP12.71□□□□□ -0.37
SNF8-215ENST00000515572 FAM200AQ8TCP9 573 aa12.71□□□□□ -0.37
SNF8-215ENST00000515572 SPPL2BQ8TCT7 592 aa12.71□□□□□ -0.37
SNF8-215ENST00000515572 JAKMIP2Q96AA8 810 aa12.71□□□□□ -0.37
SNF8-215ENST00000515572 ELMO3Q96BJ8 720 aa12.71□□□□□ -0.37
SNF8-215ENST00000515572 TNIP3Q96KP6 325 aa12.71□□□□□ -0.37
SNF8-215ENST00000515572 TMEM209Q96SK2 561 aa12.71□□□□□ -0.37
SNF8-215ENST00000515572 INTS2Q9H0H0 1204 aaKnown RBP12.71□□□□□ -0.37
SNF8-215ENST00000515572 SDCBP2Q9H190 292 aa12.71□□□□□ -0.37
SNF8-215ENST00000515572 HSD3B7Q9H2F3 369 aa12.71□□□□□ -0.37
SNF8-215ENST00000515572 TSPY26PQ9H489 355 aa12.71□□□□□ -0.37
SNF8-215ENST00000515572 CBX8Q9HC52 389 aa12.71□□□□□ -0.37
SNF8-215ENST00000515572 ABCB6Q9NP58 842 aa12.71□□□□□ -0.37
SNF8-215ENST00000515572 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.71□□□□□ -0.37
SNF8-215ENST00000515572 TAB2Q9NYJ8 693 aa12.71□□□□□ -0.37
SNF8-215ENST00000515572 CD207Q9UJ71 328 aa12.71□□□□□ -0.37
SNF8-215ENST00000515572 REV3LO60673 3130 aa12.71□□□□□ -0.38
SNF8-215ENST00000515572 MTMR11A4FU01 709 aa12.7□□□□□ -0.38
SNF8-215ENST00000515572 GOLGA6L19H0YKK7 550 aa12.7□□□□□ -0.38
SNF8-215ENST00000515572 PES1O00541 588 aaKnown RBP12.7□□□□□ -0.38
SNF8-215ENST00000515572 C8AP07357 584 aa12.7□□□□□ -0.38
SNF8-215ENST00000515572 PDGFRBP09619 1106 aa12.7□□□□□ -0.38
SNF8-215ENST00000515572 LMO2P25791 158 aa12.7□□□□□ -0.38
SNF8-215ENST00000515572 NDST1P52848 882 aa12.7□□□□□ -0.38
SNF8-215ENST00000515572 COPB1P53618 953 aaKnown RBP12.7□□□□□ -0.38
SNF8-215ENST00000515572 GCNT1Q02742 428 aa12.7□□□□□ -0.38
SNF8-215ENST00000515572 EXOC3L4Q17RC7 722 aa12.7□□□□□ -0.38
SNF8-215ENST00000515572 LEXMQ3ZCV2 418 aa12.7□□□□□ -0.38
SNF8-215ENST00000515572 PPM1LQ5SGD2 360 aa12.7□□□□□ -0.38
SNF8-215ENST00000515572 SMYD5Q6GMV2 418 aa12.7□□□□□ -0.38
SNF8-215ENST00000515572 FAM171BQ6P995 826 aa12.7□□□□□ -0.38
SNF8-215ENST00000515572 SYCE2Q6PIF2 218 aa12.7□□□□□ -0.38
SNF8-215ENST00000515572 TRIM65Q6PJ69 517 aa12.7□□□□□ -0.38
SNF8-215ENST00000515572 C4orf50Q6ZRC1 276 aa12.7□□□□□ -0.38
SNF8-215ENST00000515572 ENOSF1Q7L5Y1 443 aa12.7□□□□□ -0.38
SNF8-215ENST00000515572 LRRTM3Q86VH5 581 aa12.7□□□□□ -0.38
SNF8-215ENST00000515572 SMRP1Q8NCR6 262 aa12.7□□□□□ -0.38
SNF8-215ENST00000515572 SLC7A14Q8TBB6 771 aa12.7□□□□□ -0.38
SNF8-215ENST00000515572 TATDN2Q93075 761 aa12.7□□□□□ -0.38
SNF8-215ENST00000515572 FUBP3Q96I24 572 aaKnown RBP eCLIP12.7□□□□□ -0.38
SNF8-215ENST00000515572 PGLYRP2Q96PD5 576 aa12.7□□□□□ -0.38
SNF8-215ENST00000515572 PKMYT1Q99640 499 aa12.7□□□□□ -0.38
SNF8-215ENST00000515572 RHOBTB2Q9BYZ6 727 aa12.7□□□□□ -0.38
SNF8-215ENST00000515572 ADAM7Q9H2U9 754 aa12.7□□□□□ -0.38
SNF8-215ENST00000515572 CYP4F11Q9HBI6 524 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms