RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 MTMR12Q9C0I1 747 aa14.7□□□□□ -0.06
TCOF1-215ENST00000515516 BLZF1Q9H2G9 400 aa14.7□□□□□ -0.06
TCOF1-215ENST00000515516 LTB4R2Q9NPC1 389 aa14.7□□□□□ -0.06
TCOF1-215ENST00000515516 HEBP1Q9NRV9 189 aa14.7□□□□□ -0.06
TCOF1-215ENST00000515516 INTS13Q9NVM9 706 aa14.7□□□□□ -0.06
TCOF1-215ENST00000515516 SPATA6Q9NWH7 488 aaPredicted RBP14.7□□□□□ -0.06
TCOF1-215ENST00000515516 DDX43Q9NXZ2 648 aaKnown RBP14.7□□□□□ -0.06
TCOF1-215ENST00000515516 GTF3C3Q9Y5Q9 886 aa14.7□□□□□ -0.06
TCOF1-215ENST00000515516 SNX9Q9Y5X1 595 aa14.7□□□□□ -0.06
TCOF1-215ENST00000515516 TRIP11Q15643 1979 aa14.7□□□□□ -0.06
TCOF1-215ENST00000515516 PIEZO1Q92508 2521 aa14.69□□□□□ -0.06
TCOF1-215ENST00000515516 PVALEFA0A1B0GWK0 134 aa14.69□□□□□ -0.06
TCOF1-215ENST00000515516 HEPACAM2A8MVW5 462 aa14.69□□□□□ -0.06
TCOF1-215ENST00000515516 PRPF40AO75400 957 aaKnown RBP14.69□□□□□ -0.06
TCOF1-215ENST00000515516 HAPLN1P10915 354 aaPredicted RBP14.69□□□□□ -0.06
TCOF1-215ENST00000515516 CD72P21854 359 aa14.69□□□□□ -0.06
TCOF1-215ENST00000515516 LHX1P48742 406 aa14.69□□□□□ -0.06
TCOF1-215ENST00000515516 CDR1P51861 262 aa14.69□□□□□ -0.06
TCOF1-215ENST00000515516 WNT7BP56706 349 aa14.69□□□□□ -0.06
TCOF1-215ENST00000515516 GPR158Q5T848 1215 aa14.69□□□□□ -0.06
TCOF1-215ENST00000515516 ZC3H14Q6PJT7 736 aaKnown RBP14.69□□□□□ -0.06
TCOF1-215ENST00000515516 LRRTM3Q86VH5 581 aa14.69□□□□□ -0.06
TCOF1-215ENST00000515516 CBWD2Q8IUF1 395 aa14.69□□□□□ -0.06
TCOF1-215ENST00000515516 NELFCDQ8IXH7 590 aa14.69□□□□□ -0.06
TCOF1-215ENST00000515516 TOP6BLQ8N6T0 577 aa14.69□□□□□ -0.06
TCOF1-215ENST00000515516 RDH13Q8NBN7 331 aa14.69□□□□□ -0.06
TCOF1-215ENST00000515516 SPATA18Q8TC71 538 aa14.69□□□□□ -0.06
TCOF1-215ENST00000515516 CSGALNACT1Q8TDX6 532 aa14.69□□□□□ -0.06
TCOF1-215ENST00000515516 GIPC2Q8TF65 315 aa14.69□□□□□ -0.06
TCOF1-215ENST00000515516 LPIN3Q9BQK8 851 aa14.69□□□□□ -0.06
TCOF1-215ENST00000515516 ZNF334Q9HCZ1 680 aaPredicted RBP14.69□□□□□ -0.06
TCOF1-215ENST00000515516 GDAP2Q9NXN4 497 aa14.69□□□□□ -0.06
TCOF1-215ENST00000515516 DLGAP2Q9P1A6 1054 aa14.69□□□□□ -0.06
TCOF1-215ENST00000515516 RCOR1Q9UKL0 485 aa14.69□□□□□ -0.06
TCOF1-215ENST00000515516 NRG2O14511 850 aaPredicted RBP14.68□□□□□ -0.06
TCOF1-215ENST00000515516 LAMTOR5O43504 91 aa14.68□□□□□ -0.06
TCOF1-215ENST00000515516 LRRN2O75325 713 aa14.68□□□□□ -0.06
TCOF1-215ENST00000515516 TNNI1P19237 187 aa14.68□□□□□ -0.06
TCOF1-215ENST00000515516 PCSK1P29120 753 aa14.68□□□□□ -0.06
TCOF1-215ENST00000515516 CYP2J2P51589 502 aa14.68□□□□□ -0.06
TCOF1-215ENST00000515516 PKP1Q13835 747 aa14.68□□□□□ -0.06
TCOF1-215ENST00000515516 LMBRD2Q68DH5 695 aaPredicted RBP14.68□□□□□ -0.06
TCOF1-215ENST00000515516 EPM2AIP1Q7L775 607 aaPredicted RBP14.68□□□□□ -0.06
TCOF1-215ENST00000515516 WDR49Q8IV35 697 aa14.68□□□□□ -0.06
TCOF1-215ENST00000515516 ARID3BQ8IVW6 561 aaPredicted RBP14.68□□□□□ -0.06
TCOF1-215ENST00000515516 ADGRF2Q8IZF7 708 aa14.68□□□□□ -0.06
TCOF1-215ENST00000515516 XXYLT1Q8NBI6 393 aa14.68□□□□□ -0.06
TCOF1-215ENST00000515516 HPDLQ96IR7 371 aa14.68□□□□□ -0.06
TCOF1-215ENST00000515516 PI4K2AQ9BTU6 479 aa14.68□□□□□ -0.06
TCOF1-215ENST00000515516 SEMA4AQ9H3S1 761 aa14.68□□□□□ -0.06
TCOF1-215ENST00000515516 TASP1Q9H6P5 420 aa14.68□□□□□ -0.06
TCOF1-215ENST00000515516 SLC39A2Q9NP94 309 aa14.68□□□□□ -0.06
TCOF1-215ENST00000515516 TRPV5Q9NQA5 729 aa14.68□□□□□ -0.06
TCOF1-215ENST00000515516 AGPAT3Q9NRZ7 376 aa14.68□□□□□ -0.06
TCOF1-215ENST00000515516 CGNQ9P2M7 1197 aaKnown RBP14.68□□□□□ -0.06
TCOF1-215ENST00000515516 ZMYM5Q9UJ78 669 aa14.68□□□□□ -0.06
TCOF1-215ENST00000515516 L1RE1Q9UN81 338 aa14.68□□□□□ -0.06
TCOF1-215ENST00000515516 MTF2Q9Y483 593 aaPredicted RBP14.68□□□□□ -0.06
TCOF1-215ENST00000515516 PRR23AA6NEV1 266 aa14.67□□□□□ -0.06
TCOF1-215ENST00000515516 CLIC2O15247 247 aa14.67□□□□□ -0.06
TCOF1-215ENST00000515516 SLFN14P0C7P3 912 aa14.67□□□□□ -0.06
TCOF1-215ENST00000515516 DLATP10515 647 aaKnown RBP14.67□□□□□ -0.06
TCOF1-215ENST00000515516 GLULP15104 373 aa14.67□□□□□ -0.06
TCOF1-215ENST00000515516 ATF6P18850 670 aa14.67□□□□□ -0.06
TCOF1-215ENST00000515516 HOXD13P35453 343 aa14.67□□□□□ -0.06
TCOF1-215ENST00000515516 RPL10AP62906 217 aaKnown RBP14.67□□□□□ -0.06
TCOF1-215ENST00000515516 KRT85P78386 507 aa14.67□□□□□ -0.06
TCOF1-215ENST00000515516 CUL4BQ13620 913 aa14.67□□□□□ -0.06
TCOF1-215ENST00000515516 SNRNP35Q16560 246 aaKnown RBP14.67□□□□□ -0.06
TCOF1-215ENST00000515516 INTS6LQ5JSJ4 861 aaKnown RBP14.67□□□□□ -0.06
TCOF1-215ENST00000515516 GAREM2Q75VX8 874 aa14.67□□□□□ -0.06
TCOF1-215ENST00000515516 DPH6Q7L8W6 267 aa14.67□□□□□ -0.06
TCOF1-215ENST00000515516 ASCL5Q7RTU5 278 aa14.67□□□□□ -0.06
TCOF1-215ENST00000515516 SPATA2LQ8IUW3 424 aaPredicted RBP14.67□□□□□ -0.06
TCOF1-215ENST00000515516 OR5B17Q8NGF7 314 aa14.67□□□□□ -0.06
TCOF1-215ENST00000515516 GOLGA5Q8TBA6 731 aa14.67□□□□□ -0.06
TCOF1-215ENST00000515516 LEO1Q8WVC0 666 aaPredicted RBP14.67□□□□□ -0.06
TCOF1-215ENST00000515516 SCFD1Q8WVM8 642 aa14.67□□□□□ -0.06
TCOF1-215ENST00000515516 FAM3CQ92520 227 aa14.67□□□□□ -0.06
TCOF1-215ENST00000515516 SPATA32Q96LK8 384 aa14.67□□□□□ -0.06
TCOF1-215ENST00000515516 EXOC1Q9NV70 894 aa14.67□□□□□ -0.06
TCOF1-215ENST00000515516 USP25Q9UHP3 1055 aa14.67□□□□□ -0.06
TCOF1-215ENST00000515516 SERTAD1Q9UHV2 236 aa14.67□□□□□ -0.06
TCOF1-215ENST00000515516 SIX4Q9UIU6 781 aa14.67□□□□□ -0.06
TCOF1-215ENST00000515516 NDRG2Q9UN36 371 aaKnown RBP14.67□□□□□ -0.06
TCOF1-215ENST00000515516 ATP6V1DQ9Y5K8 247 aa14.67□□□□□ -0.06
TCOF1-215ENST00000515516 PIAS3Q9Y6X2 628 aa14.67□□□□□ -0.06
TCOF1-215ENST00000515516 WDFY4Q6ZS81 3184 aa14.66□□□□□ -0.06
TCOF1-215ENST00000515516 DOCK8Q8NF50 2099 aa14.66□□□□□ -0.06
TCOF1-215ENST00000515516 CHADO15335 359 aa14.66□□□□□ -0.06
TCOF1-215ENST00000515516 TGFB1I1O43294 461 aa14.66□□□□□ -0.06
TCOF1-215ENST00000515516 SP9P0CG40 484 aa14.66□□□□□ -0.06
TCOF1-215ENST00000515516 CSH1P0DML2 217 aa14.66□□□□□ -0.06
TCOF1-215ENST00000515516 CSH2P0DML3 217 aa14.66□□□□□ -0.06
TCOF1-215ENST00000515516 ACAT1P24752 427 aaKnown RBP14.66□□□□□ -0.06
TCOF1-215ENST00000515516 TARSP26639 723 aaKnown RBP14.66□□□□□ -0.06
TCOF1-215ENST00000515516 CASP1P29466 404 aa14.66□□□□□ -0.06
TCOF1-215ENST00000515516 KPNA1P52294 538 aaPredicted RBP14.66□□□□□ -0.06
TCOF1-215ENST00000515516 KNOP1Q1ED39 458 aaKnown RBP14.66□□□□□ -0.06
TCOF1-215ENST00000515516 STXBP5Q5T5C0 1151 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms