RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 IL21Q9HBE4 155 aa17.06■□□□□ 0.32
LMNA-223ENST00000515459 DSEQ9UL01 958 aa17.06■□□□□ 0.32
LMNA-223ENST00000515459 TBX20Q9UMR3 447 aa17.06■□□□□ 0.32
LMNA-223ENST00000515459 SLC8A2Q9UPR5 921 aa17.06■□□□□ 0.32
LMNA-223ENST00000515459 USP24Q9UPU5 2620 aa17.05■□□□□ 0.32
LMNA-223ENST00000515459 NPHP3-ACAD11A0A0J9YXS1 232 aa17.05■□□□□ 0.32
LMNA-223ENST00000515459 PIRO00625 290 aa17.05■□□□□ 0.32
LMNA-223ENST00000515459 AKAP3O75969 853 aa17.05■□□□□ 0.32
LMNA-223ENST00000515459 PIGRP01833 764 aa17.05■□□□□ 0.32
LMNA-223ENST00000515459 SCP2P22307 547 aa17.05■□□□□ 0.32
LMNA-223ENST00000515459 AVPR1AP37288 418 aa17.05■□□□□ 0.32
LMNA-223ENST00000515459 RUNX3Q13761 415 aa17.05■□□□□ 0.32
LMNA-223ENST00000515459 STPG1Q5TH74 334 aa17.05■□□□□ 0.32
LMNA-223ENST00000515459 FSTL4Q6MZW2 842 aa17.05■□□□□ 0.32
LMNA-223ENST00000515459 METTL23Q86XA0 190 aa17.05■□□□□ 0.32
LMNA-223ENST00000515459 CAMKK1Q8N5S9 505 aa17.05■□□□□ 0.32
LMNA-223ENST00000515459 C2orf15Q8WU43 125 aaKnown RBP17.05■□□□□ 0.32
LMNA-223ENST00000515459 RXFP3Q9NSD7 469 aa17.05■□□□□ 0.32
LMNA-223ENST00000515459 ODF2LQ9ULJ1 636 aa17.05■□□□□ 0.32
LMNA-223ENST00000515459 PCDHGA5Q9Y5G8 931 aa17.05■□□□□ 0.32
LMNA-223ENST00000515459 SDK1Q7Z5N4 2213 aa17.05■□□□□ 0.32
LMNA-223ENST00000515459 OBSL1O75147 1896 aa17.05■□□□□ 0.32
LMNA-223ENST00000515459 ATG2BQ96BY7 2078 aa17.05■□□□□ 0.32
LMNA-223ENST00000515459 CNOT1A5YKK6 2376 aaKnown RBP17.04■□□□□ 0.32
LMNA-223ENST00000515459 SCN1AP35498 2009 aa17.04■□□□□ 0.32
LMNA-223ENST00000515459 A0A0B4J269 797 aa17.04■□□□□ 0.32
LMNA-223ENST00000515459 ANO9A1A5B4 782 aa17.04■□□□□ 0.32
LMNA-223ENST00000515459 TRDMT1O14717 391 aaKnown RBP17.04■□□□□ 0.32
LMNA-223ENST00000515459 NFICP08651 508 aa17.04■□□□□ 0.32
LMNA-223ENST00000515459 CDR1P51861 262 aa17.04■□□□□ 0.32
LMNA-223ENST00000515459 SHC2P98077 582 aa17.04■□□□□ 0.32
LMNA-223ENST00000515459 ATP2C1P98194 919 aaPredicted RBP17.04■□□□□ 0.32
LMNA-223ENST00000515459 AMPD2Q01433 879 aa17.04■□□□□ 0.32
LMNA-223ENST00000515459 SMARCB1Q12824 385 aa17.04■□□□□ 0.32
LMNA-223ENST00000515459 BFSP1Q12934 665 aa17.04■□□□□ 0.32
LMNA-223ENST00000515459 RILPL1Q5EBL4 403 aa17.04■□□□□ 0.32
LMNA-223ENST00000515459 ARSHQ5FYA8 562 aa17.04■□□□□ 0.32
LMNA-223ENST00000515459 PLA2G2CQ5R387 149 aa17.04■□□□□ 0.32
LMNA-223ENST00000515459 THEM5Q8N1Q8 247 aa17.04■□□□□ 0.32
LMNA-223ENST00000515459 SPPL2BQ8TCT7 592 aa17.04■□□□□ 0.32
LMNA-223ENST00000515459 GIPC2Q8TF65 315 aa17.04■□□□□ 0.32
LMNA-223ENST00000515459 ZC3H10Q96K80 434 aaKnown RBP17.04■□□□□ 0.32
LMNA-223ENST00000515459 MSTO1Q9BUK6 570 aa17.04■□□□□ 0.32
LMNA-223ENST00000515459 EBF3Q9H4W6 596 aa17.04■□□□□ 0.32
LMNA-223ENST00000515459 HPS4Q9NQG7 708 aa17.04■□□□□ 0.32
LMNA-223ENST00000515459 SH2B1Q9NRF2 756 aaPredicted RBP17.04■□□□□ 0.32
LMNA-223ENST00000515459 CPSF3Q9UKF6 684 aaKnown RBP17.04■□□□□ 0.32
LMNA-223ENST00000515459 DERAQ9Y315 318 aa17.04■□□□□ 0.32
LMNA-223ENST00000515459 VWA3AA6NCI4 1184 aa17.03■□□□□ 0.32
LMNA-223ENST00000515459 K7ENM7 598 aa17.03■□□□□ 0.32
LMNA-223ENST00000515459 DDX6P26196 483 aaKnown RBP eCLIP17.03■□□□□ 0.323e-6■□□□□ 9
LMNA-223ENST00000515459 MPLP40238 635 aa17.03■□□□□ 0.32
LMNA-223ENST00000515459 TMEM132DQ14C87 1099 aa17.03■□□□□ 0.32
LMNA-223ENST00000515459 MAB21L3Q8N8X9 362 aa17.03■□□□□ 0.32
LMNA-223ENST00000515459 CHFRQ96EP1 664 aa17.03■□□□□ 0.32
LMNA-223ENST00000515459 REEP2Q9BRK0 252 aa17.03■□□□□ 0.32
LMNA-223ENST00000515459 KIF9Q9HAQ2 790 aa17.03■□□□□ 0.32
LMNA-223ENST00000515459 CCL26Q9Y258 94 aa17.03■□□□□ 0.32
LMNA-223ENST00000515459 OTOL1A6NHN0 477 aaPredicted RBP17.02■□□□□ 0.32
LMNA-223ENST00000515459 CYB561D2O14569 222 aa17.02■□□□□ 0.32
LMNA-223ENST00000515459 RNF40O75150 1001 aa17.02■□□□□ 0.32
LMNA-223ENST00000515459 EGFP01133 1207 aa17.02■□□□□ 0.32
LMNA-223ENST00000515459 HAPLN1P10915 354 aaPredicted RBP17.02■□□□□ 0.32
LMNA-223ENST00000515459 NMT1P30419 496 aaKnown RBP17.02■□□□□ 0.32
LMNA-223ENST00000515459 NLRP12P59046 1061 aa17.02■□□□□ 0.32
LMNA-223ENST00000515459 TMEM119Q4V9L6 283 aa17.02■□□□□ 0.32
LMNA-223ENST00000515459 TRIM68Q6AZZ1 485 aa17.02■□□□□ 0.32
LMNA-223ENST00000515459 CC2D1AQ6P1N0 951 aaPredicted RBP17.02■□□□□ 0.32
LMNA-223ENST00000515459 TMEM150AQ86TG1 271 aa17.02■□□□□ 0.32
LMNA-223ENST00000515459 LRRTM3Q86VH5 581 aa17.02■□□□□ 0.32
LMNA-223ENST00000515459 MYCT1Q8N699 235 aa17.02■□□□□ 0.32
LMNA-223ENST00000515459 USP13Q92995 863 aaPredicted RBP17.02■□□□□ 0.32
LMNA-223ENST00000515459 PYM1Q9BRP8 204 aaKnown RBP17.02■□□□□ 0.32
LMNA-223ENST00000515459 LSM14BQ9BX40 385 aaKnown RBP17.02■□□□□ 0.32
LMNA-223ENST00000515459 SMOC1Q9H4F8 434 aa17.02■□□□□ 0.32
LMNA-223ENST00000515459 ASB7Q9H672 318 aa17.02■□□□□ 0.32
LMNA-223ENST00000515459 VPS45Q9NRW7 570 aa17.02■□□□□ 0.32
LMNA-223ENST00000515459 TDP1Q9NUW8 608 aa17.02■□□□□ 0.32
LMNA-223ENST00000515459 ABI2Q9NYB9 513 aaPredicted RBP17.02■□□□□ 0.32
LMNA-223ENST00000515459 SOBPA7XYQ1 873 aa17.01■□□□□ 0.31
LMNA-223ENST00000515459 TRAK2O60296 914 aa17.01■□□□□ 0.31
LMNA-223ENST00000515459 FAM13AO94988 1023 aa17.01■□□□□ 0.31
LMNA-223ENST00000515459 KCNK5O95279 499 aa17.01■□□□□ 0.31
LMNA-223ENST00000515459 F11P03951 625 aa17.01■□□□□ 0.31
LMNA-223ENST00000515459 DRD1P21728 446 aa17.01■□□□□ 0.31
LMNA-223ENST00000515459 ACOT2P49753 483 aa17.01■□□□□ 0.31
LMNA-223ENST00000515459 TAF6P49848 677 aa17.01■□□□□ 0.31
LMNA-223ENST00000515459 PLK5Q496M5 336 aa17.01■□□□□ 0.31
LMNA-223ENST00000515459 MCTP1Q6DN14 999 aa17.01■□□□□ 0.31
LMNA-223ENST00000515459 SLC39A4Q6P5W5 647 aa17.01■□□□□ 0.31
LMNA-223ENST00000515459 GPBP1Q86WP2 473 aa17.01■□□□□ 0.31
LMNA-223ENST00000515459 DCP1BQ8IZD4 617 aaKnown RBP17.01■□□□□ 0.31
LMNA-223ENST00000515459 EXOC4Q96A65 974 aa17.01■□□□□ 0.31
LMNA-223ENST00000515459 HHIPQ96QV1 700 aa17.01■□□□□ 0.31
LMNA-223ENST00000515459 PARVGQ9HBI0 331 aa17.01■□□□□ 0.31
LMNA-223ENST00000515459 C2CD2Q9Y426 696 aa17.01■□□□□ 0.31
LMNA-223ENST00000515459 SEC24BO95487 1268 aa17■□□□□ 0.31
LMNA-223ENST00000515459 ARSAP15289 507 aa17■□□□□ 0.31
LMNA-223ENST00000515459 HMGA1P17096 107 aaKnown RBP17■□□□□ 0.31
LMNA-223ENST00000515459 ABCD1P33897 745 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms