RNA–Protein interactions for RNA: ENST00000515198.5

PTCD2-210, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 5

Gene PTCD2, Length 881 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-210ENST00000515198 IMPG2Q9BZV3 1241 aa13.38□□□□□ -0.27
PTCD2-210ENST00000515198 VRTNQ9H8Y1 702 aa13.38□□□□□ -0.27
PTCD2-210ENST00000515198 HCFC1R1Q9NWW0 138 aa13.38□□□□□ -0.27
PTCD2-210ENST00000515198 DNMT3BQ9UBC3 853 aaKnown RBP13.38□□□□□ -0.27
PTCD2-210ENST00000515198 YIPF1Q9Y548 306 aa13.38□□□□□ -0.27
PTCD2-210ENST00000515198 ZFP37Q9Y6Q3 630 aaPredicted RBP13.38□□□□□ -0.27
PTCD2-210ENST00000515198 PPP1R3GB7ZBB8 358 aa13.37□□□□□ -0.27
PTCD2-210ENST00000515198 PI4K2BG5E9Z4 385 aa13.37□□□□□ -0.27
PTCD2-210ENST00000515198 P4HA1P13674 534 aa13.37□□□□□ -0.27
PTCD2-210ENST00000515198 CD44P16070 742 aaKnown RBP13.37□□□□□ -0.27
PTCD2-210ENST00000515198 BMP6P22004 513 aa13.37□□□□□ -0.27
PTCD2-210ENST00000515198 WARSP23381 471 aaKnown RBP13.37□□□□□ -0.27
PTCD2-210ENST00000515198 GTF2H1P32780 548 aa13.37□□□□□ -0.27
PTCD2-210ENST00000515198 GCLMP48507 274 aa13.37□□□□□ -0.27
PTCD2-210ENST00000515198 EPHB3P54753 998 aa13.37□□□□□ -0.27
PTCD2-210ENST00000515198 NTHL1P78549 312 aa13.37□□□□□ -0.27
PTCD2-210ENST00000515198 SGSM1Q2NKQ1 1148 aa13.37□□□□□ -0.27
PTCD2-210ENST00000515198 MGAT5BQ3V5L5 792 aa13.37□□□□□ -0.27
PTCD2-210ENST00000515198 C1orf220Q5T0J3 134 aa13.37□□□□□ -0.27
PTCD2-210ENST00000515198 FOXR2Q6PJQ5 311 aa13.37□□□□□ -0.27
PTCD2-210ENST00000515198 LIMS2Q7Z4I7 341 aa13.37□□□□□ -0.27
PTCD2-210ENST00000515198 OSTM1Q86WC4 334 aa13.37□□□□□ -0.27
PTCD2-210ENST00000515198 ZC3H3Q8IXZ2 948 aaKnown RBP13.37□□□□□ -0.27
PTCD2-210ENST00000515198 KBTBD7Q8WVZ9 684 aa13.37□□□□□ -0.27
PTCD2-210ENST00000515198 NELFBQ8WX92 580 aa13.37□□□□□ -0.27
PTCD2-210ENST00000515198 TAF4BQ92750 862 aa13.37□□□□□ -0.27
PTCD2-210ENST00000515198 KHSRPQ92945 711 aaKnown RBP eCLIP13.37□□□□□ -0.27
PTCD2-210ENST00000515198 EEF2KMTQ96G04 330 aa13.37□□□□□ -0.27
PTCD2-210ENST00000515198 CORO1BQ9BR76 489 aa13.37□□□□□ -0.27
PTCD2-210ENST00000515198 XYLT2Q9H1B5 865 aa13.37□□□□□ -0.27
PTCD2-210ENST00000515198 SNX25Q9H3E2 840 aa13.37□□□□□ -0.27
PTCD2-210ENST00000515198 CLSTN2Q9H4D0 955 aa13.37□□□□□ -0.27
PTCD2-210ENST00000515198 TMEM8AQ9HCN3 771 aa13.37□□□□□ -0.27
PTCD2-210ENST00000515198 LMBRD1Q9NUN5 540 aa13.37□□□□□ -0.27
PTCD2-210ENST00000515198 ABI2Q9NYB9 513 aaPredicted RBP13.37□□□□□ -0.27
PTCD2-210ENST00000515198 NXF1Q9UBU9 619 aaKnown RBP13.37□□□□□ -0.27
PTCD2-210ENST00000515198 MUTYHQ9UIF7 546 aa13.37□□□□□ -0.27
PTCD2-210ENST00000515198 CDH9Q9ULB4 789 aa13.37□□□□□ -0.27
PTCD2-210ENST00000515198 CTNND2Q9UQB3 1225 aa13.37□□□□□ -0.27
PTCD2-210ENST00000515198 SLC27A5Q9Y2P5 690 aa13.37□□□□□ -0.27
PTCD2-210ENST00000515198 PCDHB5Q9Y5E4 795 aa13.37□□□□□ -0.27
PTCD2-210ENST00000515198 DOCK6Q96HP0 2047 aa13.36□□□□□ -0.27
PTCD2-210ENST00000515198 ZNF197O14709 1029 aa13.36□□□□□ -0.27
PTCD2-210ENST00000515198 TACC1O75410 805 aa13.36□□□□□ -0.27
PTCD2-210ENST00000515198 VNN1O95497 513 aa13.36□□□□□ -0.27
PTCD2-210ENST00000515198 HLA-DRAP01903 254 aa13.36□□□□□ -0.27
PTCD2-210ENST00000515198 RHOP08100 348 aa13.36□□□□□ -0.27
PTCD2-210ENST00000515198 ACAT1P24752 427 aaKnown RBP13.36□□□□□ -0.27
PTCD2-210ENST00000515198 GNL1P36915 607 aaPredicted RBP13.36□□□□□ -0.27
PTCD2-210ENST00000515198 MCCD1P59942 119 aaPredicted RBP13.36□□□□□ -0.27
PTCD2-210ENST00000515198 PPP3CAQ08209 521 aa13.36□□□□□ -0.27
PTCD2-210ENST00000515198 PAK1Q13153 545 aa13.36□□□□□ -0.27
PTCD2-210ENST00000515198 VEPH1Q14D04 833 aa13.36□□□□□ -0.27
PTCD2-210ENST00000515198 MAPRE1Q15691 268 aaKnown RBP13.36□□□□□ -0.27
PTCD2-210ENST00000515198 CYP4A22Q5TCH4 519 aa13.36□□□□□ -0.27
PTCD2-210ENST00000515198 TCERG1LQ5VWI1 586 aa13.36□□□□□ -0.27
PTCD2-210ENST00000515198 KRT39Q6A163 491 aa13.36□□□□□ -0.27
PTCD2-210ENST00000515198 PDZD4Q76G19 769 aaPredicted RBP13.36□□□□□ -0.27
PTCD2-210ENST00000515198 LRRTM3Q86VH5 581 aa13.36□□□□□ -0.27
PTCD2-210ENST00000515198 TTC9BQ8N6N2 239 aa13.36□□□□□ -0.27
PTCD2-210ENST00000515198 LEMD2Q8NC56 503 aa13.36□□□□□ -0.27
PTCD2-210ENST00000515198 CCDC150Q8NCX0 1101 aa13.36□□□□□ -0.27
PTCD2-210ENST00000515198 OR6B3Q8NGW1 331 aa13.36□□□□□ -0.27
PTCD2-210ENST00000515198 FAM200AQ8TCP9 573 aa13.36□□□□□ -0.27
PTCD2-210ENST00000515198 CEP63Q96MT8 703 aa13.36□□□□□ -0.27
PTCD2-210ENST00000515198 MYADMQ96S97 322 aa13.36□□□□□ -0.27
PTCD2-210ENST00000515198 SEPT5Q99719 369 aaPredicted RBP13.36□□□□□ -0.27
PTCD2-210ENST00000515198 SYT15Q9BQS2 421 aa13.36□□□□□ -0.27
PTCD2-210ENST00000515198 C1QTNF1Q9BXJ1 281 aa13.36□□□□□ -0.27
PTCD2-210ENST00000515198 NUP62CLQ9H1M0 184 aa13.36□□□□□ -0.27
PTCD2-210ENST00000515198 MMRN2Q9H8L6 949 aa13.36□□□□□ -0.27
PTCD2-210ENST00000515198 METTL14Q9HCE5 456 aaKnown RBP13.36□□□□□ -0.27
PTCD2-210ENST00000515198 AVENQ9NQS1 362 aaPredicted RBP13.36□□□□□ -0.27
PTCD2-210ENST00000515198 ASAH2Q9NR71 780 aa13.36□□□□□ -0.27
PTCD2-210ENST00000515198 CEP72Q9P209 647 aa13.36□□□□□ -0.27
PTCD2-210ENST00000515198 EPS15L1Q9UBC2 864 aa13.36□□□□□ -0.27
PTCD2-210ENST00000515198 LIMD1Q9UGP4 676 aa13.36□□□□□ -0.27
PTCD2-210ENST00000515198 ARMCX3Q9UH62 379 aaPredicted RBP13.36□□□□□ -0.27
PTCD2-210ENST00000515198 MRPS23Q9Y3D9 190 aaKnown RBP13.36□□□□□ -0.27
PTCD2-210ENST00000515198 ASB3Q9Y575 518 aa13.36□□□□□ -0.27
PTCD2-210ENST00000515198 NOTCH4Q99466 2003 aa13.35□□□□□ -0.27
PTCD2-210ENST00000515198 N4BP1O75113 896 aaKnown RBP13.35□□□□□ -0.27
PTCD2-210ENST00000515198 PDGFRBP09619 1106 aa13.35□□□□□ -0.27
PTCD2-210ENST00000515198 HAPLN1P10915 354 aaPredicted RBP13.35□□□□□ -0.27
PTCD2-210ENST00000515198 LAMP2P13473 410 aa13.35□□□□□ -0.27
PTCD2-210ENST00000515198 PTPN21Q16825 1174 aa13.35□□□□□ -0.27
PTCD2-210ENST00000515198 CCDC40Q4G0X9 1142 aa13.35□□□□□ -0.27
PTCD2-210ENST00000515198 DCAF17Q5H9S7 520 aaPredicted RBP13.35□□□□□ -0.27
PTCD2-210ENST00000515198 TTI2Q6NXR4 508 aa13.35□□□□□ -0.27
PTCD2-210ENST00000515198 C4orf50Q6ZRC1 276 aa13.35□□□□□ -0.27
PTCD2-210ENST00000515198 FILIP1Q7Z7B0 1213 aa13.35□□□□□ -0.27
PTCD2-210ENST00000515198 ITIH5Q86UX2 942 aa13.35□□□□□ -0.27
PTCD2-210ENST00000515198 SPATA2LQ8IUW3 424 aaPredicted RBP13.35□□□□□ -0.27
PTCD2-210ENST00000515198 MRPL45Q9BRJ2 306 aaKnown RBP13.35□□□□□ -0.27
PTCD2-210ENST00000515198 CRISPLD1Q9H336 500 aa13.35□□□□□ -0.27
PTCD2-210ENST00000515198 EPHX3Q9H6B9 360 aa13.35□□□□□ -0.27
PTCD2-210ENST00000515198 ABCB6Q9NP58 842 aa13.35□□□□□ -0.27
PTCD2-210ENST00000515198 TMLHEQ9NVH6 421 aa13.35□□□□□ -0.27
PTCD2-210ENST00000515198 IGSF9Q9P2J2 1179 aa13.35□□□□□ -0.27
PTCD2-210ENST00000515198 GTF3C4Q9UKN8 822 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms