RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 DMGDHQ9UI17 866 aaKnown RBP13.87□□□□□ -0.19
TCOF1-214ENST00000515035 CHRNA5P30532 468 aa13.87□□□□□ -0.19
TCOF1-214ENST00000515035 FNTAP49354 379 aa13.87□□□□□ -0.19
TCOF1-214ENST00000515035 HSD17B4P51659 736 aa13.87□□□□□ -0.19
TCOF1-214ENST00000515035 KCNK10P57789 538 aa13.87□□□□□ -0.19
TCOF1-214ENST00000515035 TBL3Q12788 808 aaKnown RBP13.87□□□□□ -0.19
TCOF1-214ENST00000515035 PIGHQ14442 188 aaPredicted RBP13.87□□□□□ -0.19
TCOF1-214ENST00000515035 PRR5LQ6MZQ0 368 aa13.87□□□□□ -0.19
TCOF1-214ENST00000515035 ARHGAP22Q7Z5H3 698 aa13.87□□□□□ -0.19
TCOF1-214ENST00000515035 MTERF3Q96E29 417 aa13.87□□□□□ -0.19
TCOF1-214ENST00000515035 ERGIC2Q96RQ1 377 aa13.87□□□□□ -0.19
TCOF1-214ENST00000515035 PHF20Q9BVI0 1012 aa13.87□□□□□ -0.19
TCOF1-214ENST00000515035 FAM153AQ9UHL3 310 aa13.87□□□□□ -0.19
TCOF1-214ENST00000515035 ZNF839A8K0R7 811 aa13.86□□□□□ -0.19
TCOF1-214ENST00000515035 ATMINO43313 823 aaPredicted RBP13.86□□□□□ -0.19
TCOF1-214ENST00000515035 PSMA4P25789 261 aaKnown RBP13.86□□□□□ -0.19
TCOF1-214ENST00000515035 ANO4Q32M45 955 aa13.86□□□□□ -0.19
TCOF1-214ENST00000515035 MEI1Q5TIA1 1274 aa13.86□□□□□ -0.19
TCOF1-214ENST00000515035 SPATA18Q8TC71 538 aa13.86□□□□□ -0.19
TCOF1-214ENST00000515035 ASAP3Q8TDY4 903 aa13.86□□□□□ -0.19
TCOF1-214ENST00000515035 OPTNQ96CV9 577 aa13.86□□□□□ -0.19
TCOF1-214ENST00000515035 MRPS26Q9BYN8 205 aaKnown RBP13.86□□□□□ -0.19
TCOF1-214ENST00000515035 DIABLOQ9NR28 239 aa13.86□□□□□ -0.19
TCOF1-214ENST00000515035 LRRC7Q96NW7 1537 aa13.86□□□□□ -0.19
TCOF1-214ENST00000515035 MYMKA6NI61 221 aa13.86□□□□□ -0.19
TCOF1-214ENST00000515035 CALB2P22676 271 aa13.86□□□□□ -0.19
TCOF1-214ENST00000515035 SWSAP1Q6NVH7 229 aa13.86□□□□□ -0.19
TCOF1-214ENST00000515035 SLC13A5Q86YT5 568 aaPredicted RBP13.86□□□□□ -0.19
TCOF1-214ENST00000515035 ENGASEQ8NFI3 743 aa13.86□□□□□ -0.19
TCOF1-214ENST00000515035 C2orf40Q9H1Z8 148 aa13.86□□□□□ -0.19
TCOF1-214ENST00000515035 SNX13Q9Y5W8 968 aa13.86□□□□□ -0.19
TCOF1-214ENST00000515035 PPRC1Q5VV67 1664 aaKnown RBP13.86□□□□□ -0.19
TCOF1-214ENST00000515035 C5orf58C9J3I9 102 aa13.86□□□□□ -0.19
TCOF1-214ENST00000515035 FOXO4P98177 505 aa13.86□□□□□ -0.19
TCOF1-214ENST00000515035 ZNF235Q14590 738 aa13.86□□□□□ -0.19
TCOF1-214ENST00000515035 KIZQ2M2Z5 673 aa13.86□□□□□ -0.19
TCOF1-214ENST00000515035 THEMIS2Q5TEJ8 643 aa13.86□□□□□ -0.19
TCOF1-214ENST00000515035 SYN2Q92777 582 aaPredicted RBP13.86□□□□□ -0.19
TCOF1-214ENST00000515035 CATSPER2Q96P56 530 aa13.86□□□□□ -0.19
TCOF1-214ENST00000515035 VPS33BQ9H267 617 aa13.86□□□□□ -0.19
TCOF1-214ENST00000515035 MPP6Q9NZW5 540 aa13.86□□□□□ -0.19
TCOF1-214ENST00000515035 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.86□□□□□ -0.19
TCOF1-214ENST00000515035 PLAGL2Q9UPG8 496 aa13.86□□□□□ -0.19
TCOF1-214ENST00000515035 USP42Q9H9J4 1324 aaKnown RBP13.86□□□□□ -0.19
TCOF1-214ENST00000515035 CST8O60676 142 aa13.86□□□□□ -0.19
TCOF1-214ENST00000515035 TPI1P60174 286 aa13.86□□□□□ -0.19
TCOF1-214ENST00000515035 SPP2Q13103 211 aa13.86□□□□□ -0.19
TCOF1-214ENST00000515035 PPIL6Q8IXY8 311 aa13.86□□□□□ -0.19
TCOF1-214ENST00000515035 ADGRF4Q8IZF3 695 aa13.86□□□□□ -0.19
TCOF1-214ENST00000515035 KLHL4Q9C0H6 718 aa13.86□□□□□ -0.19
TCOF1-214ENST00000515035 RGL1Q9NZL6 768 aa13.86□□□□□ -0.19
TCOF1-214ENST00000515035 FRMPD1Q5SYB0 1578 aa13.85□□□□□ -0.19
TCOF1-214ENST00000515035 LINC00854A0A1B0GVQ3 168 aa13.85□□□□□ -0.19
TCOF1-214ENST00000515035 PLEKP08567 350 aaPredicted RBP13.85□□□□□ -0.19
TCOF1-214ENST00000515035 FAM200BP0CF97 657 aa13.85□□□□□ -0.19
TCOF1-214ENST00000515035 EPHA7Q15375 998 aa13.85□□□□□ -0.19
TCOF1-214ENST00000515035 STRIP1Q5VSL9 837 aa13.85□□□□□ -0.19
TCOF1-214ENST00000515035 BBS7Q8IWZ6 715 aa13.85□□□□□ -0.19
TCOF1-214ENST00000515035 ZNF34Q8IZ26 560 aa13.85□□□□□ -0.19
TCOF1-214ENST00000515035 TBC1D16Q8TBP0 767 aa13.85□□□□□ -0.19
TCOF1-214ENST00000515035 PLEKHA8Q96JA3 519 aa13.85□□□□□ -0.19
TCOF1-214ENST00000515035 USE1Q9NZ43 259 aa13.85□□□□□ -0.19
TCOF1-214ENST00000515035 INO80Q9ULG1 1556 aaPredicted RBP13.85□□□□□ -0.19
TCOF1-214ENST00000515035 ADAMTS13Q76LX8 1427 aa13.85□□□□□ -0.19
TCOF1-214ENST00000515035 POLBP06746 335 aa13.85□□□□□ -0.19
TCOF1-214ENST00000515035 PTPN4P29074 926 aa13.85□□□□□ -0.19
TCOF1-214ENST00000515035 WDR72Q3MJ13 1102 aa13.85□□□□□ -0.19
TCOF1-214ENST00000515035 SNRNP48Q6IEG0 339 aaKnown RBP13.85□□□□□ -0.19
TCOF1-214ENST00000515035 MTDHQ86UE4 582 aaKnown RBP13.85□□□□□ -0.19
TCOF1-214ENST00000515035 TLK2Q86UE8 772 aa13.85□□□□□ -0.19
TCOF1-214ENST00000515035 TPCN2Q8NHX9 752 aa13.85□□□□□ -0.19
TCOF1-214ENST00000515035 NSUN6Q8TEA1 469 aaKnown RBP13.85□□□□□ -0.19
TCOF1-214ENST00000515035 TOMM70O94826 608 aa13.85□□□□□ -0.19
TCOF1-214ENST00000515035 CAMTA2O94983 1202 aa13.85□□□□□ -0.19
TCOF1-214ENST00000515035 GHRP10912 638 aa13.85□□□□□ -0.19
TCOF1-214ENST00000515035 RNF219Q5W0B1 726 aaPredicted RBP13.85□□□□□ -0.19
TCOF1-214ENST00000515035 FASTKD5Q7L8L6 764 aaKnown RBP13.85□□□□□ -0.19
TCOF1-214ENST00000515035 GLMNQ92990 594 aa13.85□□□□□ -0.19
TCOF1-214ENST00000515035 C17orf80Q9BSJ5 609 aa13.85□□□□□ -0.19
TCOF1-214ENST00000515035 ZNF302Q9NR11 478 aa13.85□□□□□ -0.19
TCOF1-214ENST00000515035 UTP6Q9NYH9 597 aaKnown RBP13.85□□□□□ -0.19
TCOF1-214ENST00000515035 CAPN6Q9Y6Q1 641 aa13.85□□□□□ -0.19
TCOF1-214ENST00000515035 FKBP6O75344 327 aa13.85□□□□□ -0.19
TCOF1-214ENST00000515035 IMPDH2P12268 514 aa13.85□□□□□ -0.19
TCOF1-214ENST00000515035 ZNF23P17027 643 aa13.85□□□□□ -0.19
TCOF1-214ENST00000515035 SHCBP1Q8NEM2 672 aa13.85□□□□□ -0.19
TCOF1-214ENST00000515035 ABHD8Q96I13 439 aa13.85□□□□□ -0.19
TCOF1-214ENST00000515035 DDX20Q9UHI6 824 aaKnown RBP13.85□□□□□ -0.19
TCOF1-214ENST00000515035 C15orf41Q9Y2V0 281 aa13.85□□□□□ -0.19
TCOF1-214ENST00000515035 RNF103O00237 685 aa13.84□□□□□ -0.19
TCOF1-214ENST00000515035 THRAP10827 490 aa13.84□□□□□ -0.19
TCOF1-214ENST00000515035 RALAP11233 206 aa13.84□□□□□ -0.19
TCOF1-214ENST00000515035 RARGP13631 454 aa13.84□□□□□ -0.19
TCOF1-214ENST00000515035 LCP1P13796 627 aa13.84□□□□□ -0.19
TCOF1-214ENST00000515035 PRLRP16471 622 aa13.84□□□□□ -0.19
TCOF1-214ENST00000515035 PAPD7Q5XG87 772 aaKnown RBP13.84□□□□□ -0.19
TCOF1-214ENST00000515035 MFN1Q8IWA4 741 aa13.84□□□□□ -0.19
TCOF1-214ENST00000515035 KRT35Q92764 455 aa13.84□□□□□ -0.19
TCOF1-214ENST00000515035 RBBP8Q99708 897 aa13.84□□□□□ -0.19
TCOF1-214ENST00000515035 COQ7Q99807 217 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms