RNA–Protein interactions for RNA: ENST00000514439.1

CPNE4-211, Transcript of copine 4, humanhuman

TSL 1 (best)

Gene CPNE4, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-211ENST00000514439 RAD23BP54727 409 aa8.67□□□□□ -1.02
CPNE4-211ENST00000514439 TAP1Q03518 808 aa8.67□□□□□ -1.02
CPNE4-211ENST00000514439 ADCY2Q08462 1091 aa8.67□□□□□ -1.02
CPNE4-211ENST00000514439 ZFYVE27Q5T4F4 411 aa8.67□□□□□ -1.02
CPNE4-211ENST00000514439 LRRC38Q5VT99 294 aa8.67□□□□□ -1.02
CPNE4-211ENST00000514439 SMYD5Q6GMV2 418 aa8.67□□□□□ -1.02
CPNE4-211ENST00000514439 MTHFD1LQ6UB35 978 aa8.67□□□□□ -1.02
CPNE4-211ENST00000514439 CHRDL2Q6WN34 429 aa8.67□□□□□ -1.02
CPNE4-211ENST00000514439 ZNF467Q7Z7K2 595 aaPredicted RBP8.67□□□□□ -1.02
CPNE4-211ENST00000514439 UHMK1Q8TAS1 419 aaKnown RBP8.67□□□□□ -1.02
CPNE4-211ENST00000514439 BRI3BPQ8WY22 251 aa8.67□□□□□ -1.02
CPNE4-211ENST00000514439 PGM2Q96G03 612 aa8.67□□□□□ -1.02
CPNE4-211ENST00000514439 TWNKQ96RR1 684 aa8.67□□□□□ -1.02
CPNE4-211ENST00000514439 MORF4L1Q9UBU8 362 aa8.67□□□□□ -1.02
CPNE4-211ENST00000514439 TJP2Q9UDY2 1190 aa8.67□□□□□ -1.02
CPNE4-211ENST00000514439 HMGXB4Q9UGU5 601 aa8.67□□□□□ -1.02
CPNE4-211ENST00000514439 CYTH4Q9UIA0 394 aa8.67□□□□□ -1.02
CPNE4-211ENST00000514439 STRIP2Q9ULQ0 834 aa8.67□□□□□ -1.02
CPNE4-211ENST00000514439 SLC45A1Q9Y2W3 748 aa8.67□□□□□ -1.02
CPNE4-211ENST00000514439 NEU2Q9Y3R4 380 aa8.67□□□□□ -1.02
CPNE4-211ENST00000514439 ZSWIM8A7E2V4 1837 aa8.67□□□□□ -1.02
CPNE4-211ENST00000514439 TLDC2A0PJX2 215 aa8.66□□□□□ -1.02
CPNE4-211ENST00000514439 IQCA1LA6NCM1 817 aa8.66□□□□□ -1.02
CPNE4-211ENST00000514439 GOLGA8SH3BPF8 625 aa8.66□□□□□ -1.02
CPNE4-211ENST00000514439 H3BRB1 525 aa8.66□□□□□ -1.02
CPNE4-211ENST00000514439 MED7O43513 233 aa8.66□□□□□ -1.02
CPNE4-211ENST00000514439 STRNO43815 780 aa8.66□□□□□ -1.02
CPNE4-211ENST00000514439 PAEPP09466 180 aa8.66□□□□□ -1.02
CPNE4-211ENST00000514439 KRT10P13645 584 aa8.66□□□□□ -1.02
CPNE4-211ENST00000514439 ATF7P17544 494 aaPredicted RBP8.66□□□□□ -1.02
CPNE4-211ENST00000514439 CETN2P41208 172 aa8.66□□□□□ -1.02
CPNE4-211ENST00000514439 GTF2A2P52657 109 aa8.66□□□□□ -1.02
CPNE4-211ENST00000514439 ITGA8P53708 1063 aa8.66□□□□□ -1.02
CPNE4-211ENST00000514439 SEC24CP53992 1094 aa8.66□□□□□ -1.02
CPNE4-211ENST00000514439 PIGHQ14442 188 aaPredicted RBP8.66□□□□□ -1.02
CPNE4-211ENST00000514439 SLC10A6Q3KNW5 377 aa8.66□□□□□ -1.02
CPNE4-211ENST00000514439 MAP1SQ66K74 1059 aaPredicted RBP8.66□□□□□ -1.02
CPNE4-211ENST00000514439 KAZNQ674X7 775 aa8.66□□□□□ -1.02
CPNE4-211ENST00000514439 TXNRD3NBQ6F5E7 133 aa8.66□□□□□ -1.02
CPNE4-211ENST00000514439 MFSD7Q6UXD7 560 aa8.66□□□□□ -1.02
CPNE4-211ENST00000514439 RCOR2Q8IZ40 523 aa8.66□□□□□ -1.02
CPNE4-211ENST00000514439 NIPA2Q8N8Q9 360 aa8.66□□□□□ -1.02
CPNE4-211ENST00000514439 SLC4A11Q8NBS3 891 aa8.66□□□□□ -1.02
CPNE4-211ENST00000514439 NLRP7Q8WX94 980 aa8.66□□□□□ -1.02
CPNE4-211ENST00000514439 SCLT1Q96NL6 688 aa8.66□□□□□ -1.02
CPNE4-211ENST00000514439 LHX5Q9H2C1 402 aa8.66□□□□□ -1.02
CPNE4-211ENST00000514439 CDC42EP4Q9H3Q1 356 aaKnown RBP8.66□□□□□ -1.02
CPNE4-211ENST00000514439 ASB7Q9H672 318 aa8.66□□□□□ -1.02
CPNE4-211ENST00000514439 TUT1Q9H6E5 874 aaKnown RBP8.66□□□□□ -1.02
CPNE4-211ENST00000514439 PLXNB2O15031 1838 aa8.66□□□□□ -1.02
CPNE4-211ENST00000514439 TSPAN1O60635 241 aa8.66□□□□□ -1.02
CPNE4-211ENST00000514439 CILPO75339 1184 aa8.66□□□□□ -1.02
CPNE4-211ENST00000514439 ITGBL1O95965 494 aaPredicted RBP8.66□□□□□ -1.02
CPNE4-211ENST00000514439 SMPD1P17405 629 aa8.66□□□□□ -1.02
CPNE4-211ENST00000514439 POLR2BP30876 1174 aaKnown RBP8.66□□□□□ -1.02
CPNE4-211ENST00000514439 ATICP31939 592 aa8.66□□□□□ -1.02
CPNE4-211ENST00000514439 ADCY8P40145 1251 aa8.66□□□□□ -1.02
CPNE4-211ENST00000514439 GCLCP48506 637 aaPredicted RBP8.66□□□□□ -1.02
CPNE4-211ENST00000514439 PTPN11Q06124 597 aaPredicted RBP8.66□□□□□ -1.02
CPNE4-211ENST00000514439 BYSLQ13895 437 aaKnown RBP8.66□□□□□ -1.02
CPNE4-211ENST00000514439 TMEM132DQ14C87 1099 aa8.66□□□□□ -1.02
CPNE4-211ENST00000514439 GRIK4Q16099 956 aa8.66□□□□□ -1.02
CPNE4-211ENST00000514439 MARCH8Q5T0T0 291 aa8.66□□□□□ -1.02
CPNE4-211ENST00000514439 SPOCD1Q6ZMY3 1216 aa8.66□□□□□ -1.02
CPNE4-211ENST00000514439 ZNF365Q70YC5 407 aa8.66□□□□□ -1.02
CPNE4-211ENST00000514439 ILDR2Q71H61 639 aa8.66□□□□□ -1.02
CPNE4-211ENST00000514439 TRMT10CQ7L0Y3 403 aaKnown RBP8.66□□□□□ -1.02
CPNE4-211ENST00000514439 GPR142Q7Z601 462 aa8.66□□□□□ -1.02
CPNE4-211ENST00000514439 DPP9Q86TI2 863 aa8.66□□□□□ -1.02
CPNE4-211ENST00000514439 PNMA8AQ86V59 439 aaPredicted RBP8.66□□□□□ -1.02
CPNE4-211ENST00000514439 EPS8L3Q8TE67 593 aaKnown RBP8.66□□□□□ -1.02
CPNE4-211ENST00000514439 ACSF2Q96CM8 615 aaPredicted RBP8.66□□□□□ -1.02
CPNE4-211ENST00000514439 FAXDC2Q96IV6 333 aa8.66□□□□□ -1.02
CPNE4-211ENST00000514439 DDX23Q9BUQ8 820 aaKnown RBP8.66□□□□□ -1.02
CPNE4-211ENST00000514439 TMEM109Q9BVC6 243 aa8.66□□□□□ -1.02
CPNE4-211ENST00000514439 TRAIPQ9BWF2 469 aa8.66□□□□□ -1.02
CPNE4-211ENST00000514439 ELOVL4Q9GZR5 314 aa8.66□□□□□ -1.02
CPNE4-211ENST00000514439 VRTNQ9H8Y1 702 aa8.66□□□□□ -1.02
CPNE4-211ENST00000514439 DNAJC17Q9NVM6 304 aaKnown RBP8.66□□□□□ -1.02
CPNE4-211ENST00000514439 CLEC11AQ9Y240 323 aa8.66□□□□□ -1.02
CPNE4-211ENST00000514439 MGAMO43451 1857 aa8.66□□□□□ -1.02
CPNE4-211ENST00000514439 PLXNA1Q9UIW2 1896 aa8.66□□□□□ -1.02
CPNE4-211ENST00000514439 UNCXA6NJT0 531 aa8.65□□□□□ -1.02
CPNE4-211ENST00000514439 SIGLEC16A6NMB1 481 aa8.65□□□□□ -1.02
CPNE4-211ENST00000514439 SRRM3A6NNA2 597 aaPredicted RBP8.65□□□□□ -1.02
CPNE4-211ENST00000514439 MYO1CO00159 1063 aa8.65□□□□□ -1.02
CPNE4-211ENST00000514439 EBAG9O00559 213 aa8.65□□□□□ -1.02
CPNE4-211ENST00000514439 RGS16O15492 202 aaPredicted RBP8.65□□□□□ -1.02
CPNE4-211ENST00000514439 LIASO43766 372 aa8.65□□□□□ -1.02
CPNE4-211ENST00000514439 ACSL3O95573 720 aa8.65□□□□□ -1.02
CPNE4-211ENST00000514439 MMP3P08254 477 aa8.65□□□□□ -1.02
CPNE4-211ENST00000514439 PSMA2P25787 234 aa8.65□□□□□ -1.02
CPNE4-211ENST00000514439 KLRC2P26717 231 aa8.65□□□□□ -1.02
CPNE4-211ENST00000514439 RFC1P35251 1148 aaPredicted RBP8.65□□□□□ -1.02
CPNE4-211ENST00000514439 SLCO1A2P46721 670 aa8.65□□□□□ -1.02
CPNE4-211ENST00000514439 CAV1Q03135 178 aa8.65□□□□□ -1.02
CPNE4-211ENST00000514439 GRB14Q14449 540 aa8.65□□□□□ -1.02
CPNE4-211ENST00000514439 DUSP28Q4G0W2 176 aa8.65□□□□□ -1.02
CPNE4-211ENST00000514439 ANKRD23Q86SG2 305 aa8.65□□□□□ -1.02
CPNE4-211ENST00000514439 PRUNE1Q86TP1 453 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms