RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 UNC93AQ86WB7 457 aa10.84□□□□□ -0.67
NEDD9-214ENST00000513989 ADGRF2Q8IZF7 708 aa10.84□□□□□ -0.67
NEDD9-214ENST00000513989 PDCL2Q8N4E4 241 aa10.84□□□□□ -0.67
NEDD9-214ENST00000513989 C3orf58Q8NDZ4 430 aa10.84□□□□□ -0.67
NEDD9-214ENST00000513989 OR6B3Q8NGW1 331 aa10.84□□□□□ -0.67
NEDD9-214ENST00000513989 BCO2Q9BYV7 579 aa10.84□□□□□ -0.67
NEDD9-214ENST00000513989 GPR62Q9BZJ7 368 aa10.84□□□□□ -0.67
NEDD9-214ENST00000513989 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.84□□□□□ -0.67
NEDD9-214ENST00000513989 ZNHIT6Q9NWK9 470 aaKnown RBP10.84□□□□□ -0.67
NEDD9-214ENST00000513989 MARCH5Q9NX47 278 aa10.84□□□□□ -0.67
NEDD9-214ENST00000513989 HCSTQ9UBK5 93 aa10.84□□□□□ -0.67
NEDD9-214ENST00000513989 MYO6Q9UM54 1294 aa10.84□□□□□ -0.67
NEDD9-214ENST00000513989 BARX2Q9UMQ3 279 aaPredicted RBP10.84□□□□□ -0.67
NEDD9-214ENST00000513989 POLIQ9UNA4 740 aa10.84□□□□□ -0.67
NEDD9-214ENST00000513989 PCDHB4Q9Y5E5 795 aa10.84□□□□□ -0.67
NEDD9-214ENST00000513989 ZDBF2Q9HCK1 2354 aa10.84□□□□□ -0.67
NEDD9-214ENST00000513989 A0A1W2PQJ5 194 aa10.83□□□□□ -0.68
NEDD9-214ENST00000513989 FAM86C2PA6NEL3 165 aa10.83□□□□□ -0.68
NEDD9-214ENST00000513989 GRXCR2A6NFK2 248 aa10.83□□□□□ -0.68
NEDD9-214ENST00000513989 OR6C75A6NL08 312 aa10.83□□□□□ -0.68
NEDD9-214ENST00000513989 A8MXQ7 604 aa10.83□□□□□ -0.68
NEDD9-214ENST00000513989 H3BQ06 376 aaPredicted RBP10.83□□□□□ -0.68
NEDD9-214ENST00000513989 I3L4J1 428 aa10.83□□□□□ -0.68
NEDD9-214ENST00000513989 GRM6O15303 877 aa10.83□□□□□ -0.68
NEDD9-214ENST00000513989 OAZ2O95190 189 aa10.83□□□□□ -0.68
NEDD9-214ENST00000513989 ITGB1P05556 798 aa10.83□□□□□ -0.68
NEDD9-214ENST00000513989 CD58P19256 250 aa10.83□□□□□ -0.68
NEDD9-214ENST00000513989 CDC25BP30305 580 aa10.83□□□□□ -0.68
NEDD9-214ENST00000513989 CA8P35219 290 aa10.83□□□□□ -0.68
NEDD9-214ENST00000513989 PLA2G5P39877 138 aa10.83□□□□□ -0.68
NEDD9-214ENST00000513989 PBX1P40424 430 aa10.83□□□□□ -0.68
NEDD9-214ENST00000513989 ASPAP45381 313 aa10.83□□□□□ -0.68
NEDD9-214ENST00000513989 GLUD2P49448 558 aa10.83□□□□□ -0.68
NEDD9-214ENST00000513989 CDH8P55286 799 aa10.83□□□□□ -0.68
NEDD9-214ENST00000513989 DSG1Q02413 1049 aa10.83□□□□□ -0.68
NEDD9-214ENST00000513989 PTK2Q05397 1052 aa10.83□□□□□ -0.68
NEDD9-214ENST00000513989 DRAP1Q14919 205 aaPredicted RBP10.83□□□□□ -0.68
NEDD9-214ENST00000513989 PTPROQ16827 1216 aa10.83□□□□□ -0.68
NEDD9-214ENST00000513989 IQCEQ6IPM2 695 aa10.83□□□□□ -0.68
NEDD9-214ENST00000513989 PTCRAQ6ISU1 281 aaPredicted RBP10.83□□□□□ -0.68
NEDD9-214ENST00000513989 ZNF280DQ6N043 979 aa10.83□□□□□ -0.68
NEDD9-214ENST00000513989 SCARA5Q6ZMJ2 495 aa10.83□□□□□ -0.68
NEDD9-214ENST00000513989 TMC6Q7Z403 805 aa10.83□□□□□ -0.68
NEDD9-214ENST00000513989 LIMS2Q7Z4I7 341 aa10.83□□□□□ -0.68
NEDD9-214ENST00000513989 DCP1BQ8IZD4 617 aaKnown RBP10.83□□□□□ -0.68
NEDD9-214ENST00000513989 CPLX3Q8WVH0 158 aa10.83□□□□□ -0.68
NEDD9-214ENST00000513989 RIN2Q8WYP3 895 aaPredicted RBP10.83□□□□□ -0.68
NEDD9-214ENST00000513989 ACBD6Q9BR61 282 aa10.83□□□□□ -0.68
NEDD9-214ENST00000513989 HERC2P3Q9BVR0 1158 aa10.83□□□□□ -0.68
NEDD9-214ENST00000513989 NT5C1AQ9BXI3 368 aa10.83□□□□□ -0.68
NEDD9-214ENST00000513989 EMILIN2Q9BXX0 1053 aa10.83□□□□□ -0.68
NEDD9-214ENST00000513989 LMAN2LQ9H0V9 348 aa10.83□□□□□ -0.68
NEDD9-214ENST00000513989 SIX2Q9NPC8 291 aa10.83□□□□□ -0.68
NEDD9-214ENST00000513989 CHST7Q9NS84 486 aa10.83□□□□□ -0.68
NEDD9-214ENST00000513989 CISHQ9NSE2 258 aa10.83□□□□□ -0.68
NEDD9-214ENST00000513989 DDX43Q9NXZ2 648 aaKnown RBP10.83□□□□□ -0.68
NEDD9-214ENST00000513989 IMPACTQ9P2X3 320 aa10.83□□□□□ -0.68
NEDD9-214ENST00000513989 CAPN11Q9UMQ6 739 aa10.83□□□□□ -0.68
NEDD9-214ENST00000513989 L1RE1Q9UN81 338 aa10.83□□□□□ -0.68
NEDD9-214ENST00000513989 TIMM13Q9Y5L4 95 aaPredicted RBP10.83□□□□□ -0.68
NEDD9-214ENST00000513989 AKR1B15C9JRZ8 316 aaPredicted RBP10.82□□□□□ -0.68
NEDD9-214ENST00000513989 F8W810 466 aa10.82□□□□□ -0.68
NEDD9-214ENST00000513989 PI4K2BG5E9Z4 385 aa10.82□□□□□ -0.68
NEDD9-214ENST00000513989 FOXN3O00409 490 aaPredicted RBP10.82□□□□□ -0.68
NEDD9-214ENST00000513989 GABRDO14764 452 aa10.82□□□□□ -0.68
NEDD9-214ENST00000513989 AP5Z1O43299 807 aa10.82□□□□□ -0.68
NEDD9-214ENST00000513989 GPR37L1O60883 481 aa10.82□□□□□ -0.68
NEDD9-214ENST00000513989 LRRN2O75325 713 aa10.82□□□□□ -0.68
NEDD9-214ENST00000513989 NOL4O94818 638 aa10.82□□□□□ -0.68
NEDD9-214ENST00000513989 PDGFRBP09619 1106 aa10.82□□□□□ -0.68
NEDD9-214ENST00000513989 CTSAP10619 480 aa10.82□□□□□ -0.68
NEDD9-214ENST00000513989 DNAJB1P25685 340 aa10.82□□□□□ -0.68
NEDD9-214ENST00000513989 TKTP29401 623 aaKnown RBP10.82□□□□□ -0.68
NEDD9-214ENST00000513989 GTF2F1P35269 517 aaKnown RBP eCLIP10.82□□□□□ -0.68
NEDD9-214ENST00000513989 KLK7P49862 253 aa10.82□□□□□ -0.68
NEDD9-214ENST00000513989 ZBED6P86452 979 aa10.82□□□□□ -0.68
NEDD9-214ENST00000513989 DLX2Q07687 328 aaPredicted RBP10.82□□□□□ -0.68
NEDD9-214ENST00000513989 SMARCB1Q12824 385 aa10.82□□□□□ -0.68
NEDD9-214ENST00000513989 SMC1AQ14683 1233 aaKnown RBP10.82□□□□□ -0.68
NEDD9-214ENST00000513989 MAPRE1Q15691 268 aaKnown RBP10.82□□□□□ -0.68
NEDD9-214ENST00000513989 CTC1Q2NKJ3 1217 aa10.82□□□□□ -0.68
NEDD9-214ENST00000513989 CTXN3Q4LDR2 81 aa10.82□□□□□ -0.68
NEDD9-214ENST00000513989 VARS2Q5ST30 1063 aaKnown RBP10.82□□□□□ -0.68
NEDD9-214ENST00000513989 SCARA3Q6AZY7 606 aa10.82□□□□□ -0.68
NEDD9-214ENST00000513989 TMEM270Q6UE05 265 aa10.82□□□□□ -0.68
NEDD9-214ENST00000513989 TMEM173Q86WV6 379 aaPredicted RBP10.82□□□□□ -0.68
NEDD9-214ENST00000513989 CNGA4Q8IV77 575 aa10.82□□□□□ -0.68
NEDD9-214ENST00000513989 ARHGEF19Q8IW93 802 aa10.82□□□□□ -0.68
NEDD9-214ENST00000513989 TMEM130Q8N3G9 435 aa10.82□□□□□ -0.68
NEDD9-214ENST00000513989 SPPL3Q8TCT6 385 aa10.82□□□□□ -0.68
NEDD9-214ENST00000513989 POF1BQ8WVV4 589 aa10.82□□□□□ -0.68
NEDD9-214ENST00000513989 SYN2Q92777 582 aaPredicted RBP10.82□□□□□ -0.68
NEDD9-214ENST00000513989 PPP2R3CQ969Q6 453 aa10.82□□□□□ -0.68
NEDD9-214ENST00000513989 PABPC5Q96DU9 382 aaKnown RBP10.82□□□□□ -0.68
NEDD9-214ENST00000513989 TMEM176AQ96HP8 235 aa10.82□□□□□ -0.68
NEDD9-214ENST00000513989 HEXIM2Q96MH2 286 aaKnown RBP10.82□□□□□ -0.68
NEDD9-214ENST00000513989 MRPL45Q9BRJ2 306 aaKnown RBP10.82□□□□□ -0.68
NEDD9-214ENST00000513989 NAA15Q9BXJ9 866 aaKnown RBP10.82□□□□□ -0.68
NEDD9-214ENST00000513989 NSUN3Q9H649 340 aaKnown RBP10.82□□□□□ -0.68
NEDD9-214ENST00000513989 SMYD3Q9H7B4 428 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms