RNA–Protein interactions for RNA: ENST00000513506.5

POLR2J3-218, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-218ENST00000513506 LINC01565O15544 149 aa16.6■□□□□ 0.25
POLR2J3-218ENST00000513506 SRGAP2BP0DMP2 458 aa16.6■□□□□ 0.25
POLR2J3-218ENST00000513506 TBXAS1P24557 533 aaPredicted RBP16.6■□□□□ 0.25
POLR2J3-218ENST00000513506 LMO2P25791 158 aa16.6■□□□□ 0.25
POLR2J3-218ENST00000513506 NFE2Q16621 373 aaPredicted RBP16.6■□□□□ 0.25
POLR2J3-218ENST00000513506 EXOC3L4Q17RC7 722 aa16.6■□□□□ 0.25
POLR2J3-218ENST00000513506 INTS6LQ5JSJ4 861 aaKnown RBP16.6■□□□□ 0.25
POLR2J3-218ENST00000513506 ANKRD54Q6NXT1 300 aa16.6■□□□□ 0.25
POLR2J3-218ENST00000513506 SYCE2Q6PIF2 218 aa16.6■□□□□ 0.25
POLR2J3-218ENST00000513506 ELMSAN1Q6PJG2 1045 aa16.6■□□□□ 0.25
POLR2J3-218ENST00000513506 DCP1BQ8IZD4 617 aaKnown RBP16.6■□□□□ 0.25
POLR2J3-218ENST00000513506 KREMEN2Q8NCW0 462 aa16.6■□□□□ 0.25
POLR2J3-218ENST00000513506 TATDN2Q93075 761 aa16.6■□□□□ 0.25
POLR2J3-218ENST00000513506 HLA-CQ95604 372 aa16.6■□□□□ 0.25
POLR2J3-218ENST00000513506 FAM81BQ96LP2 452 aa16.6■□□□□ 0.25
POLR2J3-218ENST00000513506 S1PR5Q9H228 398 aa16.6■□□□□ 0.25
POLR2J3-218ENST00000513506 UBE2ZQ9H832 354 aaPredicted RBP16.6■□□□□ 0.25
POLR2J3-218ENST00000513506 MMRN2Q9H8L6 949 aa16.6■□□□□ 0.25
POLR2J3-218ENST00000513506 ZDHHC7Q9NXF8 308 aa16.6■□□□□ 0.25
POLR2J3-218ENST00000513506 BARX2Q9UMQ3 279 aaPredicted RBP16.6■□□□□ 0.25
POLR2J3-218ENST00000513506 CNTN6Q9UQ52 1028 aa16.6■□□□□ 0.25
POLR2J3-218ENST00000513506 TSC2P49815 1807 aa16.6■□□□□ 0.25
POLR2J3-218ENST00000513506 LGALS16A8MUM7 142 aa16.59■□□□□ 0.25
POLR2J3-218ENST00000513506 TBX10O75333 385 aa16.59■□□□□ 0.25
POLR2J3-218ENST00000513506 CILPO75339 1184 aa16.59■□□□□ 0.25
POLR2J3-218ENST00000513506 ATP1A3P13637 1013 aa16.59■□□□□ 0.25
POLR2J3-218ENST00000513506 PON1P27169 355 aa16.59■□□□□ 0.25
POLR2J3-218ENST00000513506 COPB1P53618 953 aaKnown RBP16.59■□□□□ 0.25
POLR2J3-218ENST00000513506 CDH8P55286 799 aa16.59■□□□□ 0.25
POLR2J3-218ENST00000513506 CUL2Q13617 745 aa16.59■□□□□ 0.25
POLR2J3-218ENST00000513506 MAPRE1Q15691 268 aaKnown RBP16.59■□□□□ 0.25
POLR2J3-218ENST00000513506 CFAP221Q4G0U5 840 aa16.59■□□□□ 0.25
POLR2J3-218ENST00000513506 PHLDB3Q6NSJ2 640 aa16.59■□□□□ 0.25
POLR2J3-218ENST00000513506 TRIM65Q6PJ69 517 aa16.59■□□□□ 0.25
POLR2J3-218ENST00000513506 ENOSF1Q7L5Y1 443 aa16.59■□□□□ 0.25
POLR2J3-218ENST00000513506 PALB2Q86YC2 1186 aa16.59■□□□□ 0.25
POLR2J3-218ENST00000513506 ANKRD20A12PQ8NF67 263 aa16.59■□□□□ 0.25
POLR2J3-218ENST00000513506 WHAMMQ8TF30 809 aa16.59■□□□□ 0.25
POLR2J3-218ENST00000513506 FUBP3Q96I24 572 aaKnown RBP eCLIP16.59■□□□□ 0.25
POLR2J3-218ENST00000513506 NT5C1BQ96P26 610 aa16.59■□□□□ 0.25
POLR2J3-218ENST00000513506 TMEM209Q96SK2 561 aa16.59■□□□□ 0.25
POLR2J3-218ENST00000513506 INTS2Q9H0H0 1204 aaKnown RBP16.59■□□□□ 0.25
POLR2J3-218ENST00000513506 SNX25Q9H3E2 840 aa16.59■□□□□ 0.25
POLR2J3-218ENST00000513506 IGFLR1Q9H665 355 aa16.59■□□□□ 0.25
POLR2J3-218ENST00000513506 MTMR11A4FU01 709 aa16.58■□□□□ 0.24
POLR2J3-218ENST00000513506 BECN2A8MW95 431 aa16.58■□□□□ 0.24
POLR2J3-218ENST00000513506 ZMYND10O75800 440 aa16.58■□□□□ 0.24
POLR2J3-218ENST00000513506 HNRNPA1P09651 372 aaKnown RBP eCLIP16.58■□□□□ 0.24
POLR2J3-218ENST00000513506 WEE2P0C1S8 567 aa16.58■□□□□ 0.24
POLR2J3-218ENST00000513506 ACO1P21399 889 aaKnown RBP16.58■□□□□ 0.24
POLR2J3-218ENST00000513506 RBM10P98175 930 aaKnown RBP16.58■□□□□ 0.24
POLR2J3-218ENST00000513506 TSPY1Q01534 308 aa16.58■□□□□ 0.24
POLR2J3-218ENST00000513506 ITIH3Q06033 890 aa16.58■□□□□ 0.24
POLR2J3-218ENST00000513506 DLX2Q07687 328 aaPredicted RBP16.58■□□□□ 0.24
POLR2J3-218ENST00000513506 KCNMA1Q12791 1236 aa16.58■□□□□ 0.24
POLR2J3-218ENST00000513506 CCDC85BQ15834 202 aaPredicted RBP16.58■□□□□ 0.24
POLR2J3-218ENST00000513506 LEXMQ3ZCV2 418 aa16.58■□□□□ 0.24
POLR2J3-218ENST00000513506 HSP90AA4PQ58FG1 418 aa16.58■□□□□ 0.24
POLR2J3-218ENST00000513506 RNF19BQ6ZMZ0 732 aa16.58■□□□□ 0.24
POLR2J3-218ENST00000513506 CCDC149Q6ZUS6 474 aa16.58■□□□□ 0.24
POLR2J3-218ENST00000513506 SMRP1Q8NCR6 262 aa16.58■□□□□ 0.24
POLR2J3-218ENST00000513506 MYCBPAPQ8TBZ2 947 aa16.58■□□□□ 0.24
POLR2J3-218ENST00000513506 SPPL2BQ8TCT7 592 aa16.58■□□□□ 0.24
POLR2J3-218ENST00000513506 TNIP3Q96KP6 325 aa16.58■□□□□ 0.24
POLR2J3-218ENST00000513506 CEP295NLQ96MC4 621 aa16.58■□□□□ 0.24
POLR2J3-218ENST00000513506 TSPY26PQ9H489 355 aa16.58■□□□□ 0.24
POLR2J3-218ENST00000513506 SIX2Q9NPC8 291 aa16.58■□□□□ 0.24
POLR2J3-218ENST00000513506 PLCB1Q9NQ66 1216 aa16.58■□□□□ 0.24
POLR2J3-218ENST00000513506 CRTAC1Q9NQ79 661 aa16.58■□□□□ 0.24
POLR2J3-218ENST00000513506 CISHQ9NSE2 258 aa16.58■□□□□ 0.24
POLR2J3-218ENST00000513506 CLDND1Q9NY35 253 aa16.58■□□□□ 0.24
POLR2J3-218ENST00000513506 GCNT4Q9P109 453 aa16.58■□□□□ 0.24
POLR2J3-218ENST00000513506 DAAM1Q9Y4D1 1078 aa16.58■□□□□ 0.24
POLR2J3-218ENST00000513506 CSPG5O95196 566 aa16.57■□□□□ 0.24
POLR2J3-218ENST00000513506 PTPN1P18031 435 aaKnown RBP16.57■□□□□ 0.24
POLR2J3-218ENST00000513506 MAGEA11P43364 429 aa16.57■□□□□ 0.24
POLR2J3-218ENST00000513506 YWHAEP62258 255 aaKnown RBP16.57■□□□□ 0.24
POLR2J3-218ENST00000513506 LUZP1Q86V48 1076 aa16.57■□□□□ 0.24
POLR2J3-218ENST00000513506 B3GALNT2Q8NCR0 500 aa16.57■□□□□ 0.24
POLR2J3-218ENST00000513506 OR6B3Q8NGW1 331 aa16.57■□□□□ 0.24
POLR2J3-218ENST00000513506 SUSD6Q92537 303 aa16.57■□□□□ 0.24
POLR2J3-218ENST00000513506 ELMO3Q96BJ8 720 aa16.57■□□□□ 0.24
POLR2J3-218ENST00000513506 ZNF707Q96C28 371 aaPredicted RBP16.57■□□□□ 0.24
POLR2J3-218ENST00000513506 ERGIC2Q96RQ1 377 aa16.57■□□□□ 0.24
POLR2J3-218ENST00000513506 SYT15Q9BQS2 421 aa16.57■□□□□ 0.24
POLR2J3-218ENST00000513506 ADAM7Q9H2U9 754 aa16.57■□□□□ 0.24
POLR2J3-218ENST00000513506 SFXN1Q9H9B4 322 aa16.57■□□□□ 0.24
POLR2J3-218ENST00000513506 MAN1C1Q9NR34 630 aa16.57■□□□□ 0.24
POLR2J3-218ENST00000513506 TMLHEQ9NVH6 421 aa16.57■□□□□ 0.24
POLR2J3-218ENST00000513506 TAB2Q9NYJ8 693 aa16.57■□□□□ 0.24
POLR2J3-218ENST00000513506 CEP72Q9P209 647 aa16.57■□□□□ 0.24
POLR2J3-218ENST00000513506 APEX2Q9UBZ4 518 aa16.57■□□□□ 0.24
POLR2J3-218ENST00000513506 A0A1B0GTH6 734 aa16.56■□□□□ 0.24
POLR2J3-218ENST00000513506 MYBPHLA2RUH7 354 aa16.56■□□□□ 0.24
POLR2J3-218ENST00000513506 A8MXQ7 604 aa16.56■□□□□ 0.24
POLR2J3-218ENST00000513506 SEC24AO95486 1093 aa16.56■□□□□ 0.24
POLR2J3-218ENST00000513506 TPM2P07951 284 aa16.56■□□□□ 0.24
POLR2J3-218ENST00000513506 OR4Q2P0C623 313 aa16.56■□□□□ 0.24
POLR2J3-218ENST00000513506 CPB1P15086 417 aa16.56■□□□□ 0.24
POLR2J3-218ENST00000513506 SLC9A1P19634 815 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms