RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 TMEM253P0C7T8 217 aa6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 GARSP41250 739 aaKnown RBP6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 ECI1P42126 302 aa6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 CHAF1BQ13112 559 aa6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 DUSP28Q4G0W2 176 aa6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 CCDC122Q5T0U0 273 aa6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 SLC35F1Q5T1Q4 408 aa6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 PM20D1Q6GTS8 502 aa6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 WDR93Q6P2C0 686 aa6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 OVCH1Q7RTY7 1134 aa6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 CPLX4Q7Z7G2 160 aa6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 NLRP13Q86W25 1043 aa6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 TUSC5Q8IXB3 177 aa6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 OXR1Q8N573 874 aa6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 BANPQ8N9N5 519 aa6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 DEPDC1BQ8WUY9 529 aa6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 GIMAP5Q96F15 307 aa6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 ABHD17AQ96GS6 310 aa6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 CCDC43Q96MW1 224 aaKnown RBP6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 FUT8Q9BYC5 575 aa6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 TTYH1Q9H313 450 aaPredicted RBP6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 IL21RQ9HBE5 538 aa6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 CYP46A1Q9Y6A2 500 aa6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 TEX14Q8IWB6 1497 aa6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 LMTK3Q96Q04 1460 aa6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 CAPN14A8MX76 684 aa6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 TMCO5BA8MYB1 307 aa6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 GTPBP1O00178 669 aaKnown RBP6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 HNRNPRO43390 633 aaKnown RBP6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 VEGFDO43915 354 aa6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 DIAPH2O60879 1101 aa6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 GHRP10912 638 aa6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 ZNF41P51814 821 aaPredicted RBP6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 DCTN2Q13561 401 aaKnown RBP6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 SYCP1Q15431 976 aa6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 AARDQ4LEZ3 155 aa6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 OTUD7BQ6GQQ9 843 aa6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 TANGO2Q6ICL3 276 aa6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 RRAGAQ7L523 313 aa6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 KCNK18Q7Z418 384 aa6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 FAM83AQ86UY5 434 aa6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 TAGAPQ8N103 731 aa6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 CNTROBQ8N137 903 aa6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 KAT5Q92993 513 aa6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 SIPA1Q96FS4 1042 aa6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 PRICKLE1Q96MT3 831 aaPredicted RBP6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 THUMPD3Q9BV44 507 aaKnown RBP6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 NMRK1Q9NWW6 199 aa6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 UBA2Q9UBT2 640 aaPredicted RBP6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 FRMPD1Q5SYB0 1578 aa6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 ARVCFO00192 962 aa6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 POLR3GO15318 223 aaPredicted RBP6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 TGFB1I1O43294 461 aa6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 TRIM16O95361 564 aa6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 PTBP3O95758 552 aaKnown RBP6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 OPN1MWP04001 364 aa6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 QDPRP09417 244 aa6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 OPN1MW2P0DN77 364 aa6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 OPN1MW3P0DN78 364 aa6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 BUD31P41223 144 aaPredicted RBP6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 ARCN1P48444 511 aaKnown RBP6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 KCNJ10P78508 379 aa6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 CYP4F8P98187 520 aa6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 RPA4Q13156 261 aa6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 AKNAD1Q5T1N1 836 aa6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 GTF2IRD2BQ6EKJ0 949 aa6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 NFRKBQ6P4R8 1299 aa6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 CNKSR3Q6P9H4 555 aa6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 IKBIPQ70UQ0 350 aa6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 GTF2IRD2Q86UP8 949 aa6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 GMCL1P1Q8NEA9 526 aa6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 GBP4Q96PP9 640 aa6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 TWNKQ96RR1 684 aa6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 BCL7BQ9BQE9 202 aa6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 VPS16Q9H269 839 aa6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 ZNF287Q9HBT7 754 aa6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 SENP2Q9HC62 589 aa6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 TM9SF3Q9HD45 589 aa6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 MID1IP1Q9NPA3 183 aa6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 HSF4Q9ULV5 492 aa6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 ABCA6Q8N139 1617 aa6.72□□□□□ -1.33
TRAPPC11-209ENST00000512476 A2MP01023 1474 aa6.71□□□□□ -1.33
TRAPPC11-209ENST00000512476 TSPOAP1O95153 1857 aa6.71□□□□□ -1.33
TRAPPC11-209ENST00000512476 KIAA1217Q5T5P2 1943 aa6.71□□□□□ -1.33
TRAPPC11-209ENST00000512476 PLSCR1O15162 318 aa6.71□□□□□ -1.34
TRAPPC11-209ENST00000512476 HTRA2O43464 458 aaPredicted RBP6.71□□□□□ -1.34
TRAPPC11-209ENST00000512476 PEX11AO75192 247 aa6.71□□□□□ -1.34
TRAPPC11-209ENST00000512476 ENTPD3O75355 529 aa6.71□□□□□ -1.34
TRAPPC11-209ENST00000512476 UBOX5O94941 541 aa6.71□□□□□ -1.34
TRAPPC11-209ENST00000512476 PRAMEF12O95522 483 aa6.71□□□□□ -1.34
TRAPPC11-209ENST00000512476 COL6A2P12110 1019 aa6.71□□□□□ -1.34
TRAPPC11-209ENST00000512476 LAG3P18627 525 aa6.71□□□□□ -1.34
TRAPPC11-209ENST00000512476 CCNA2P20248 432 aa6.71□□□□□ -1.34
TRAPPC11-209ENST00000512476 RPA1P27694 616 aa6.71□□□□□ -1.34
TRAPPC11-209ENST00000512476 NOS3P29474 1203 aa6.71□□□□□ -1.34
TRAPPC11-209ENST00000512476 GRK4P32298 578 aa6.71□□□□□ -1.34
TRAPPC11-209ENST00000512476 GP5P40197 560 aa6.71□□□□□ -1.34
TRAPPC11-209ENST00000512476 OCRLQ01968 901 aa6.71□□□□□ -1.34
TRAPPC11-209ENST00000512476 ITIH3Q06033 890 aa6.71□□□□□ -1.34
TRAPPC11-209ENST00000512476 EXOSC9Q06265 439 aaKnown RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms