RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 MSANTD4Q8NCY6 345 aa8.62□□□□□ -1.03
HTT-209ENST00000512068 LNX1Q8TBB1 728 aaPredicted RBP8.62□□□□□ -1.03
HTT-209ENST00000512068 CAGE1Q8TC20 777 aa8.62□□□□□ -1.03
HTT-209ENST00000512068 SLC20A1Q8WUM9 679 aa8.62□□□□□ -1.03
HTT-209ENST00000512068 DEFB118Q96PH6 123 aa8.62□□□□□ -1.03
HTT-209ENST00000512068 WDR24Q96S15 920 aa8.62□□□□□ -1.03
HTT-209ENST00000512068 FAM124BQ9H5Z6 455 aaPredicted RBP8.62□□□□□ -1.03
HTT-209ENST00000512068 CYP3A43Q9HB55 503 aa8.62□□□□□ -1.03
HTT-209ENST00000512068 APOBEC3GQ9HC16 384 aaKnown RBP8.62□□□□□ -1.03
HTT-209ENST00000512068 FAM105AQ9NUU6 356 aa8.62□□□□□ -1.03
HTT-209ENST00000512068 CNTN3Q9P232 1028 aa8.62□□□□□ -1.03
HTT-209ENST00000512068 TRIM10Q9UDY6 481 aa8.62□□□□□ -1.03
HTT-209ENST00000512068 HES2Q9Y543 173 aa8.62□□□□□ -1.03
HTT-209ENST00000512068 SQORQ9Y6N5 450 aa8.62□□□□□ -1.03
HTT-209ENST00000512068 UQCRHLA0A096LP55 91 aa8.61□□□□□ -1.03
HTT-209ENST00000512068 A0A0A6YYK5 440 aaPredicted RBP8.61□□□□□ -1.03
HTT-209ENST00000512068 A0A0U1RQJ8 604 aa8.61□□□□□ -1.03
HTT-209ENST00000512068 ANO9A1A5B4 782 aa8.61□□□□□ -1.03
HTT-209ENST00000512068 ANKRD62A6NC57 917 aa8.61□□□□□ -1.03
HTT-209ENST00000512068 FAM187AA6NFU0 413 aa8.61□□□□□ -1.03
HTT-209ENST00000512068 SLU7O95391 586 aaKnown RBP8.61□□□□□ -1.03
HTT-209ENST00000512068 STAU1O95793 577 aaKnown RBP8.61□□□□□ -1.03
HTT-209ENST00000512068 CHRNA1P02708 482 aa8.61□□□□□ -1.03
HTT-209ENST00000512068 UQCRHP07919 91 aa8.61□□□□□ -1.03
HTT-209ENST00000512068 MMEP08473 750 aa8.61□□□□□ -1.03
HTT-209ENST00000512068 GZMAP12544 262 aa8.61□□□□□ -1.03
HTT-209ENST00000512068 CCL5P13501 91 aa8.61□□□□□ -1.03
HTT-209ENST00000512068 CYP3A5P20815 502 aa8.61□□□□□ -1.03
HTT-209ENST00000512068 CD52P31358 61 aa8.61□□□□□ -1.03
HTT-209ENST00000512068 GALCP54803 685 aa8.61□□□□□ -1.03
HTT-209ENST00000512068 CKAP4Q07065 602 aaKnown RBP8.61□□□□□ -1.03
HTT-209ENST00000512068 SV2CQ496J9 727 aa8.61□□□□□ -1.03
HTT-209ENST00000512068 GLRA4Q5JXX5 417 aa8.61□□□□□ -1.03
HTT-209ENST00000512068 FBXO47Q5MNV8 452 aa8.61□□□□□ -1.03
HTT-209ENST00000512068 CYP2U1Q7Z449 544 aa8.61□□□□□ -1.03
HTT-209ENST00000512068 RHOT2Q8IXI1 618 aa8.61□□□□□ -1.03
HTT-209ENST00000512068 SIX5Q8N196 739 aa8.61□□□□□ -1.03
HTT-209ENST00000512068 LRRC52Q8N7C0 313 aa8.61□□□□□ -1.03
HTT-209ENST00000512068 RNF169Q8NCN4 708 aa8.61□□□□□ -1.03
HTT-209ENST00000512068 ATRIPQ8WXE1 791 aa8.61□□□□□ -1.03
HTT-209ENST00000512068 RFFLQ8WZ73 363 aa8.61□□□□□ -1.03
HTT-209ENST00000512068 ELMO3Q96BJ8 720 aa8.61□□□□□ -1.03
HTT-209ENST00000512068 ZNF653Q96CK0 615 aa8.61□□□□□ -1.03
HTT-209ENST00000512068 IRX2Q9BZI1 471 aaPredicted RBP8.61□□□□□ -1.03
HTT-209ENST00000512068 LACRTQ9GZZ8 138 aa8.61□□□□□ -1.03
HTT-209ENST00000512068 ERVK-5Q9HDB9 667 aa8.61□□□□□ -1.03
HTT-209ENST00000512068 UBN1Q9NPG3 1134 aa8.61□□□□□ -1.03
HTT-209ENST00000512068 CISHQ9NSE2 258 aa8.61□□□□□ -1.03
HTT-209ENST00000512068 KLK14Q9P0G3 267 aa8.61□□□□□ -1.03
HTT-209ENST00000512068 CTTNBP2NLQ9P2B4 639 aa8.61□□□□□ -1.03
HTT-209ENST00000512068 NOCTQ9UK39 431 aaKnown RBP8.61□□□□□ -1.03
HTT-209ENST00000512068 PADI3Q9ULW8 664 aa8.61□□□□□ -1.03
HTT-209ENST00000512068 TFR2Q9UP52 801 aa8.61□□□□□ -1.03
HTT-209ENST00000512068 JRKLQ9Y4A0 524 aa8.61□□□□□ -1.03
HTT-209ENST00000512068 GRIN2DO15399 1336 aa8.6□□□□□ -1.03
HTT-209ENST00000512068 UMODL1Q5DID0 1318 aa8.6□□□□□ -1.03
HTT-209ENST00000512068 DKK1O94907 266 aa8.6□□□□□ -1.03
HTT-209ENST00000512068 TFRCP02786 760 aaKnown RBP8.6□□□□□ -1.03
HTT-209ENST00000512068 FTLP02792 175 aaPredicted RBP8.6□□□□□ -1.03
HTT-209ENST00000512068 THP07101 528 aa8.6□□□□□ -1.03
HTT-209ENST00000512068 ADH1AP07327 375 aa8.6□□□□□ -1.03
HTT-209ENST00000512068 PAEPP09466 180 aa8.6□□□□□ -1.03
HTT-209ENST00000512068 WEE2P0C1S8 567 aa8.6□□□□□ -1.03
HTT-209ENST00000512068 MYBL1P10243 752 aa8.6□□□□□ -1.03
HTT-209ENST00000512068 CKBP12277 381 aa8.6□□□□□ -1.03
HTT-209ENST00000512068 KCNE1P15382 129 aa8.6□□□□□ -1.03
HTT-209ENST00000512068 ASPAP45381 313 aa8.6□□□□□ -1.03
HTT-209ENST00000512068 TAF6P49848 677 aa8.6□□□□□ -1.03
HTT-209ENST00000512068 GUCY2FP51841 1108 aa8.6□□□□□ -1.03
HTT-209ENST00000512068 GPC5P78333 572 aa8.6□□□□□ -1.03
HTT-209ENST00000512068 FMO1Q01740 532 aa8.6□□□□□ -1.03
HTT-209ENST00000512068 CBLBQ13191 982 aa8.6□□□□□ -1.03
HTT-209ENST00000512068 ZNF394Q53GI3 561 aa8.6□□□□□ -1.03
HTT-209ENST00000512068 FAM26DQ5JW98 314 aa8.6□□□□□ -1.03
HTT-209ENST00000512068 UBXN11Q5T124 520 aa8.6□□□□□ -1.03
HTT-209ENST00000512068 ZNF618Q5T7W0 954 aa8.6□□□□□ -1.03
HTT-209ENST00000512068 CCDC181Q5TID7 509 aa8.6□□□□□ -1.03
HTT-209ENST00000512068 ACAD10Q6JQN1 1059 aa8.6□□□□□ -1.03
HTT-209ENST00000512068 CTU1Q7Z7A3 348 aaKnown RBP8.6□□□□□ -1.03
HTT-209ENST00000512068 CEP112Q8N8E3 955 aa8.6□□□□□ -1.03
HTT-209ENST00000512068 KDF1Q8NAX2 398 aaPredicted RBP8.6□□□□□ -1.03
HTT-209ENST00000512068 TMEM35BQ8NCS4 154 aa8.6□□□□□ -1.03
HTT-209ENST00000512068 MYRIPQ8NFW9 859 aa8.6□□□□□ -1.03
HTT-209ENST00000512068 SLC30A5Q8TAD4 765 aa8.6□□□□□ -1.03
HTT-209ENST00000512068 WNT8BQ93098 351 aa8.6□□□□□ -1.03
HTT-209ENST00000512068 FTHL17Q9BXU8 183 aa8.6□□□□□ -1.03
HTT-209ENST00000512068 PACSIN1Q9BY11 444 aa8.6□□□□□ -1.03
HTT-209ENST00000512068 TRPV6Q9H1D0 765 aa8.6□□□□□ -1.03
HTT-209ENST00000512068 SIX4Q9UIU6 781 aa8.6□□□□□ -1.03
HTT-209ENST00000512068 POLIQ9UNA4 740 aa8.6□□□□□ -1.03
HTT-209ENST00000512068 GIT1Q9Y2X7 761 aa8.6□□□□□ -1.03
HTT-209ENST00000512068 TDRD15B5MCY1 1934 aaKnown RBP8.6□□□□□ -1.03
HTT-209ENST00000512068 NCANO14594 1321 aa8.59□□□□□ -1.03
HTT-209ENST00000512068 SMIM28A0A1B0GU29 152 aa8.59□□□□□ -1.03
HTT-209ENST00000512068 DCDC2CA8MYV0 355 aa8.59□□□□□ -1.03
HTT-209ENST00000512068 CAPN5O15484 640 aaPredicted RBP8.59□□□□□ -1.03
HTT-209ENST00000512068 PQBP1O60828 265 aaKnown RBP8.59□□□□□ -1.03
HTT-209ENST00000512068 HUS1O60921 280 aa8.59□□□□□ -1.03
HTT-209ENST00000512068 PALMO75781 387 aa8.59□□□□□ -1.03
HTT-209ENST00000512068 LSM8O95777 96 aaKnown RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms