RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 CELF4Q9BZC1 486 aaKnown RBP11.34□□□□□ -0.59
CPNE4-209ENST00000512055 MEIS2O14770 477 aa11.34□□□□□ -0.59
CPNE4-209ENST00000512055 RGS5O15539 181 aa11.34□□□□□ -0.59
CPNE4-209ENST00000512055 PRPSAP2O60256 369 aa11.34□□□□□ -0.59
CPNE4-209ENST00000512055 BAIAP3O94812 1187 aa11.34□□□□□ -0.59
CPNE4-209ENST00000512055 PHKA2P46019 1235 aa11.34□□□□□ -0.59
CPNE4-209ENST00000512055 CASP5P51878 434 aa11.34□□□□□ -0.59
CPNE4-209ENST00000512055 ADCY2Q08462 1091 aa11.34□□□□□ -0.59
CPNE4-209ENST00000512055 ATP1A4Q13733 1029 aa11.34□□□□□ -0.59
CPNE4-209ENST00000512055 OTOP1Q7RTM1 612 aa11.34□□□□□ -0.59
CPNE4-209ENST00000512055 KIRREL3Q8IZU9 778 aa11.34□□□□□ -0.59
CPNE4-209ENST00000512055 RYBPQ8N488 228 aaPredicted RBP11.34□□□□□ -0.59
CPNE4-209ENST00000512055 LRRC71Q8N4P6 559 aa11.34□□□□□ -0.59
CPNE4-209ENST00000512055 SYTL5Q8TDW5 730 aaPredicted RBP11.34□□□□□ -0.59
CPNE4-209ENST00000512055 POP1Q99575 1024 aaKnown RBP11.34□□□□□ -0.59
CPNE4-209ENST00000512055 TARS2Q9BW92 718 aaKnown RBP11.34□□□□□ -0.59
CPNE4-209ENST00000512055 THAP2Q9H0W7 228 aa11.34□□□□□ -0.59
CPNE4-209ENST00000512055 CLEC4MQ9H2X3 399 aaPredicted RBP11.34□□□□□ -0.59
CPNE4-209ENST00000512055 GGT7Q9UJ14 662 aa11.34□□□□□ -0.59
CPNE4-209ENST00000512055 PI4K2BG5E9Z4 385 aa11.34□□□□□ -0.59
CPNE4-209ENST00000512055 XPOTO43592 962 aaKnown RBP11.34□□□□□ -0.59
CPNE4-209ENST00000512055 TBXAS1P24557 533 aaPredicted RBP11.34□□□□□ -0.59
CPNE4-209ENST00000512055 PLA2G4AP47712 749 aa11.34□□□□□ -0.59
CPNE4-209ENST00000512055 DAB2IPQ5VWQ8 1189 aa11.34□□□□□ -0.59
CPNE4-209ENST00000512055 SDE2Q6IQ49 451 aa11.34□□□□□ -0.59
CPNE4-209ENST00000512055 ZNF571Q7Z3V5 609 aaPredicted RBP11.34□□□□□ -0.59
CPNE4-209ENST00000512055 GLIS2Q9BZE0 524 aaPredicted RBP11.34□□□□□ -0.59
CPNE4-209ENST00000512055 WNT8AQ9H1J5 351 aa11.34□□□□□ -0.59
CPNE4-209ENST00000512055 SLITRK6Q9H5Y7 841 aa11.34□□□□□ -0.59
CPNE4-209ENST00000512055 TBX20Q9UMR3 447 aa11.34□□□□□ -0.59
CPNE4-209ENST00000512055 CHEK2O96017 543 aa11.33□□□□□ -0.6
CPNE4-209ENST00000512055 ACTR2P61160 394 aa11.33□□□□□ -0.6
CPNE4-209ENST00000512055 NFX1Q12986 1120 aaKnown RBP11.33□□□□□ -0.6
CPNE4-209ENST00000512055 DUOXA2Q1HG44 320 aa11.33□□□□□ -0.6
CPNE4-209ENST00000512055 PPP1R2P3Q6NXS1 205 aa11.33□□□□□ -0.6
CPNE4-209ENST00000512055 SZRD1Q7Z422 152 aa11.33□□□□□ -0.6
CPNE4-209ENST00000512055 RBM46Q8TBY0 533 aaKnown RBP11.33□□□□□ -0.6
CPNE4-209ENST00000512055 MTMR8Q96EF0 704 aa11.33□□□□□ -0.6
CPNE4-209ENST00000512055 ZBTB18Q99592 522 aa11.33□□□□□ -0.6
CPNE4-209ENST00000512055 TINF2Q9BSI4 451 aa11.33□□□□□ -0.6
CPNE4-209ENST00000512055 FUT8Q9BYC5 575 aa11.33□□□□□ -0.6
CPNE4-209ENST00000512055 MRPL40Q9NQ50 206 aaKnown RBP11.33□□□□□ -0.6
CPNE4-209ENST00000512055 PFASO15067 1338 aa11.33□□□□□ -0.6
CPNE4-209ENST00000512055 PLSCR1O15162 318 aa11.33□□□□□ -0.6
CPNE4-209ENST00000512055 GUCY1B2O75343 617 aa11.33□□□□□ -0.6
CPNE4-209ENST00000512055 SKAP2O75563 359 aaPredicted RBP11.33□□□□□ -0.6
CPNE4-209ENST00000512055 CHRNA3P32297 505 aa11.33□□□□□ -0.6
CPNE4-209ENST00000512055 PMS2P54278 862 aa11.33□□□□□ -0.6
CPNE4-209ENST00000512055 ENOSF1Q7L5Y1 443 aa11.33□□□□□ -0.6
CPNE4-209ENST00000512055 AIPL1Q9NZN9 384 aa11.33□□□□□ -0.6
CPNE4-209ENST00000512055 HPCAL4Q9UM19 191 aa11.33□□□□□ -0.6
CPNE4-209ENST00000512055 ALG6Q9Y672 507 aa11.33□□□□□ -0.6
CPNE4-209ENST00000512055 ZNF263O14978 683 aa11.33□□□□□ -0.6
CPNE4-209ENST00000512055 MEFVO15553 781 aaPredicted RBP11.33□□□□□ -0.6
CPNE4-209ENST00000512055 PRKCBP05771 671 aa11.33□□□□□ -0.6
CPNE4-209ENST00000512055 PGM1P36871 562 aa11.33□□□□□ -0.6
CPNE4-209ENST00000512055 BACE1P56817 501 aa11.33□□□□□ -0.6
CPNE4-209ENST00000512055 TAF8Q7Z7C8 310 aa11.33□□□□□ -0.6
CPNE4-209ENST00000512055 OR2W6PQ8NHA6 318 aa11.33□□□□□ -0.6
CPNE4-209ENST00000512055 ELMO3Q96BJ8 720 aa11.33□□□□□ -0.6
CPNE4-209ENST00000512055 RNF225M0QZC1 329 aaPredicted RBP11.33□□□□□ -0.6
CPNE4-209ENST00000512055 EPHB6O15197 1021 aa11.33□□□□□ -0.6
CPNE4-209ENST00000512055 TJP3O95049 919 aa11.33□□□□□ -0.6
CPNE4-209ENST00000512055 RPS12P25398 132 aaKnown RBP11.33□□□□□ -0.6
CPNE4-209ENST00000512055 IL12RB1P42701 662 aa11.33□□□□□ -0.6
CPNE4-209ENST00000512055 KPNA2P52292 529 aaKnown RBP11.33□□□□□ -0.6
CPNE4-209ENST00000512055 LAMC2Q13753 1193 aa11.33□□□□□ -0.6
CPNE4-209ENST00000512055 WDR72Q3MJ13 1102 aa11.33□□□□□ -0.6
CPNE4-209ENST00000512055 C2CD6Q53TS8 623 aa11.33□□□□□ -0.6
CPNE4-209ENST00000512055 USP38Q8NB14 1042 aa11.33□□□□□ -0.6
CPNE4-209ENST00000512055 CCNYQ8ND76 341 aa11.33□□□□□ -0.6
CPNE4-209ENST00000512055 PARD3BQ8TEW8 1205 aa11.33□□□□□ -0.6
CPNE4-209ENST00000512055 SEPT1Q8WYJ6 367 aa11.33□□□□□ -0.6
CPNE4-209ENST00000512055 EXT2Q93063 718 aa11.33□□□□□ -0.6
CPNE4-209ENST00000512055 LRRC37A3O60309 1634 aa11.32□□□□□ -0.6
CPNE4-209ENST00000512055 TMEM247A6NEH6 219 aa11.32□□□□□ -0.6
CPNE4-209ENST00000512055 PPP1R11O60927 126 aaPredicted RBP11.32□□□□□ -0.6
CPNE4-209ENST00000512055 COMTP21964 271 aa11.32□□□□□ -0.6
CPNE4-209ENST00000512055 HSPA9P38646 679 aaKnown RBP11.32□□□□□ -0.6
CPNE4-209ENST00000512055 SLC12A3P55017 1021 aa11.32□□□□□ -0.6
CPNE4-209ENST00000512055 CDK17Q00537 523 aa11.32□□□□□ -0.6
CPNE4-209ENST00000512055 PAPD7Q5XG87 772 aaKnown RBP11.32□□□□□ -0.6
CPNE4-209ENST00000512055 LRRC8EQ6NSJ5 796 aa11.32□□□□□ -0.6
CPNE4-209ENST00000512055 CYGBQ8WWM9 190 aa11.32□□□□□ -0.6
CPNE4-209ENST00000512055 MKL1Q969V6 931 aa11.32□□□□□ -0.6
CPNE4-209ENST00000512055 LRRC39Q96DD0 335 aa11.32□□□□□ -0.6
CPNE4-209ENST00000512055 OLFM1Q99784 485 aa11.32□□□□□ -0.6
CPNE4-209ENST00000512055 SAYSD1Q9NPB0 183 aa11.32□□□□□ -0.6
CPNE4-209ENST00000512055 ANKEF1Q9NU02 776 aa11.32□□□□□ -0.6
CPNE4-209ENST00000512055 DMGDHQ9UI17 866 aaKnown RBP11.32□□□□□ -0.6
CPNE4-209ENST00000512055 AP1G2O75843 785 aa11.32□□□□□ -0.6
CPNE4-209ENST00000512055 ANP32DO95626 131 aa11.32□□□□□ -0.6
CPNE4-209ENST00000512055 ABL1P00519 1130 aa11.32□□□□□ -0.6
CPNE4-209ENST00000512055 HLA-DRAP01903 254 aa11.32□□□□□ -0.6
CPNE4-209ENST00000512055 ARFIP2P53365 341 aa11.32□□□□□ -0.6
CPNE4-209ENST00000512055 NCOA4Q13772 614 aa11.32□□□□□ -0.6
CPNE4-209ENST00000512055 ECM1Q16610 540 aa11.32□□□□□ -0.6
CPNE4-209ENST00000512055 RSRC2Q7L4I2 434 aaKnown RBP11.32□□□□□ -0.6
CPNE4-209ENST00000512055 EPM2AIP1Q7L775 607 aaPredicted RBP11.32□□□□□ -0.6
CPNE4-209ENST00000512055 GALNT4Q8N4A0 578 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms