RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 NPEPPSP55786 919 aa7.41□□□□□ -1.22
COPS4-209ENST00000511653 RNASELQ05823 741 aaKnown RBP7.41□□□□□ -1.22
COPS4-209ENST00000511653 SOX4Q06945 474 aaPredicted RBP7.41□□□□□ -1.22
COPS4-209ENST00000511653 Q4G0T1 1027 aa7.41□□□□□ -1.22
COPS4-209ENST00000511653 ATAT1Q5SQI0 421 aa7.41□□□□□ -1.22
COPS4-209ENST00000511653 UBXN11Q5T124 520 aa7.41□□□□□ -1.22
COPS4-209ENST00000511653 ZBTB37Q5TC79 503 aa7.41□□□□□ -1.22
COPS4-209ENST00000511653 CCDC149Q6ZUS6 474 aa7.41□□□□□ -1.22
COPS4-209ENST00000511653 GPR149Q86SP6 731 aa7.41□□□□□ -1.22
COPS4-209ENST00000511653 CABP7Q86V35 215 aa7.41□□□□□ -1.22
COPS4-209ENST00000511653 ZNF410Q86VK4 478 aa7.41□□□□□ -1.22
COPS4-209ENST00000511653 RBBP8NLQ8NC74 664 aaPredicted RBP7.41□□□□□ -1.22
COPS4-209ENST00000511653 SMG8Q8ND04 991 aaKnown RBP7.41□□□□□ -1.22
COPS4-209ENST00000511653 FLCNQ8NFG4 579 aa7.41□□□□□ -1.22
COPS4-209ENST00000511653 MBOAT7Q96N66 472 aa7.41□□□□□ -1.22
COPS4-209ENST00000511653 AIFM3Q96NN9 605 aa7.41□□□□□ -1.22
COPS4-209ENST00000511653 KLHL5Q96PQ7 755 aa7.41□□□□□ -1.22
COPS4-209ENST00000511653 WNT10AQ9GZT5 417 aa7.41□□□□□ -1.22
COPS4-209ENST00000511653 MRPL18Q9H0U6 180 aaKnown RBP7.41□□□□□ -1.22
COPS4-209ENST00000511653 IRF2BPLQ9H1B7 796 aa7.41□□□□□ -1.22
COPS4-209ENST00000511653 MFSD1Q9H3U5 465 aa7.41□□□□□ -1.22
COPS4-209ENST00000511653 SFXN1Q9H9B4 322 aa7.41□□□□□ -1.22
COPS4-209ENST00000511653 CYP26B1Q9NR63 512 aa7.41□□□□□ -1.22
COPS4-209ENST00000511653 AGPAT5Q9NUQ2 364 aa7.41□□□□□ -1.22
COPS4-209ENST00000511653 MARCH5Q9NX47 278 aa7.41□□□□□ -1.22
COPS4-209ENST00000511653 WRAP73Q9P2S5 460 aaPredicted RBP7.41□□□□□ -1.22
COPS4-209ENST00000511653 TJP2Q9UDY2 1190 aa7.41□□□□□ -1.22
COPS4-209ENST00000511653 PCDHB2Q9Y5E7 798 aa7.41□□□□□ -1.22
COPS4-209ENST00000511653 ACTL7BQ9Y614 415 aa7.41□□□□□ -1.22
COPS4-209ENST00000511653 PATJQ8NI35 1801 aa7.41□□□□□ -1.22
COPS4-209ENST00000511653 CFAP47Q6ZTR5 3102 aa7.41□□□□□ -1.22
COPS4-209ENST00000511653 DTNBO60941 627 aa7.41□□□□□ -1.22
COPS4-209ENST00000511653 ZNF623O75123 536 aa7.41□□□□□ -1.22
COPS4-209ENST00000511653 PDIA3P30101 505 aaKnown RBP7.41□□□□□ -1.22
COPS4-209ENST00000511653 HSPA4P34932 840 aa7.41□□□□□ -1.22
COPS4-209ENST00000511653 PREPP48147 710 aa7.41□□□□□ -1.22
COPS4-209ENST00000511653 NLRP5P59047 1200 aa7.41□□□□□ -1.22
COPS4-209ENST00000511653 AKAP17AQ02040 695 aaKnown RBP7.41□□□□□ -1.22
COPS4-209ENST00000511653 TOB2Q14106 344 aaPredicted RBP7.41□□□□□ -1.22
COPS4-209ENST00000511653 BMS1Q14692 1282 aaKnown RBP7.41□□□□□ -1.22
COPS4-209ENST00000511653 TAS1R1Q7RTX1 841 aa7.41□□□□□ -1.22
COPS4-209ENST00000511653 FBXL16Q8N461 479 aa7.41□□□□□ -1.22
COPS4-209ENST00000511653 C2CD4AQ8NCU7 369 aaPredicted RBP7.41□□□□□ -1.22
COPS4-209ENST00000511653 RDM1Q8NG50 284 aa7.41□□□□□ -1.22
COPS4-209ENST00000511653 DPH2Q9BQC3 489 aaPredicted RBP7.41□□□□□ -1.22
COPS4-209ENST00000511653 OSBPL2Q9H1P3 480 aa7.41□□□□□ -1.22
COPS4-209ENST00000511653 ZSWIM4Q9H7M6 989 aa7.41□□□□□ -1.22
COPS4-209ENST00000511653 KLHL3Q9UH77 587 aa7.41□□□□□ -1.22
COPS4-209ENST00000511653 VAV3Q9UKW4 847 aa7.41□□□□□ -1.22
COPS4-209ENST00000511653 DUSP12Q9UNI6 340 aa7.41□□□□□ -1.22
COPS4-209ENST00000511653 PRG3Q9Y2Y8 225 aaPredicted RBP7.41□□□□□ -1.22
COPS4-209ENST00000511653 COL4A3BPQ9Y5P4 624 aa7.41□□□□□ -1.22
COPS4-209ENST00000511653 ZFHX4Q86UP3 3567 aa7.4□□□□□ -1.22
COPS4-209ENST00000511653 CYP3A7-CYP3A51PA0A087WV96 503 aa7.4□□□□□ -1.23
COPS4-209ENST00000511653 EIF4EBP3O60516 100 aaPredicted RBP7.4□□□□□ -1.23
COPS4-209ENST00000511653 RFPL2O75678 378 aa7.4□□□□□ -1.23
COPS4-209ENST00000511653 POMCP01189 267 aa7.4□□□□□ -1.23
COPS4-209ENST00000511653 AOC1P19801 751 aa7.4□□□□□ -1.23
COPS4-209ENST00000511653 CYP3A7P24462 503 aa7.4□□□□□ -1.23
COPS4-209ENST00000511653 KLRC2P26717 231 aa7.4□□□□□ -1.23
COPS4-209ENST00000511653 POLR2BP30876 1174 aaKnown RBP7.4□□□□□ -1.23
COPS4-209ENST00000511653 HOXA11P31270 313 aaPredicted RBP7.4□□□□□ -1.23
COPS4-209ENST00000511653 RAB27AP51159 221 aa7.4□□□□□ -1.23
COPS4-209ENST00000511653 CLCN5P51795 746 aa7.4□□□□□ -1.23
COPS4-209ENST00000511653 EVCP57679 992 aa7.4□□□□□ -1.23
COPS4-209ENST00000511653 ETF1P62495 437 aaKnown RBP7.4□□□□□ -1.23
COPS4-209ENST00000511653 RAB33AQ14088 237 aa7.4□□□□□ -1.23
COPS4-209ENST00000511653 GIT2Q14161 759 aa7.4□□□□□ -1.23
COPS4-209ENST00000511653 INF2Q27J81 1249 aa7.4□□□□□ -1.23
COPS4-209ENST00000511653 DYMQ7RTS9 669 aa7.4□□□□□ -1.23
COPS4-209ENST00000511653 C12orf50Q8NA57 414 aaPredicted RBP7.4□□□□□ -1.23
COPS4-209ENST00000511653 RSAD2Q8WXG1 361 aa7.4□□□□□ -1.23
COPS4-209ENST00000511653 TMEM143Q96AN5 459 aa7.4□□□□□ -1.23
COPS4-209ENST00000511653 RSAD1Q9HA92 442 aa7.4□□□□□ -1.23
COPS4-209ENST00000511653 KCNK12Q9HB15 430 aa7.4□□□□□ -1.23
COPS4-209ENST00000511653 MAN1C1Q9NR34 630 aa7.4□□□□□ -1.23
COPS4-209ENST00000511653 SH3GLB2Q9NR46 395 aa7.4□□□□□ -1.23
COPS4-209ENST00000511653 ST7Q9NRC1 585 aa7.4□□□□□ -1.23
COPS4-209ENST00000511653 LAMA1P25391 3075 aa7.4□□□□□ -1.23
COPS4-209ENST00000511653 KRBA1A5PL33 1030 aa7.39□□□□□ -1.23
COPS4-209ENST00000511653 FAM221BA6H8Z2 402 aa7.39□□□□□ -1.23
COPS4-209ENST00000511653 NRP1O14786 923 aa7.39□□□□□ -1.23
COPS4-209ENST00000511653 EFEMP2O95967 443 aa7.39□□□□□ -1.23
COPS4-209ENST00000511653 SRGAP2CP0DJJ0 459 aa7.39□□□□□ -1.23
COPS4-209ENST00000511653 NOS3P29474 1203 aa7.39□□□□□ -1.23
COPS4-209ENST00000511653 DNM2P50570 870 aa7.39□□□□□ -1.23
COPS4-209ENST00000511653 AK2P54819 239 aa7.39□□□□□ -1.23
COPS4-209ENST00000511653 PSMC5P62195 406 aa7.39□□□□□ -1.23
COPS4-209ENST00000511653 CDC42EP1Q00587 391 aa7.39□□□□□ -1.23
COPS4-209ENST00000511653 TDGQ13569 410 aa7.39□□□□□ -1.23
COPS4-209ENST00000511653 LETM2Q2VYF4 491 aa7.39□□□□□ -1.23
COPS4-209ENST00000511653 TMEM201Q5SNT2 666 aa7.39□□□□□ -1.23
COPS4-209ENST00000511653 OTOP3Q7RTS5 596 aa7.39□□□□□ -1.23
COPS4-209ENST00000511653 MRPL10Q7Z7H8 261 aaKnown RBP7.39□□□□□ -1.23
COPS4-209ENST00000511653 PPFIBP1Q86W92 1011 aa7.39□□□□□ -1.23
COPS4-209ENST00000511653 CCDC105Q8IYK2 499 aa7.39□□□□□ -1.23
COPS4-209ENST00000511653 BLIDQ8IZY5 108 aa7.39□□□□□ -1.23
COPS4-209ENST00000511653 RNF214Q8ND24 703 aa7.39□□□□□ -1.23
COPS4-209ENST00000511653 ST13P5Q8NFI4 369 aaPredicted RBP7.39□□□□□ -1.23
COPS4-209ENST00000511653 URGCPQ8TCY9 931 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms