RNA–Protein interactions for RNA: ENST00000510676.6

PTCD2-208, Transcript of pentatricopeptide repeat domain 2, human

TSL 5

Gene PTCD2, Length 1,001 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD2-208	ENST00000510676	GOLGA2P5	Q9HBQ8	144 aa		11.8	□□□□□ -0.52
PTCD2-208	ENST00000510676	CCL26	Q9Y258	94 aa		11.8	□□□□□ -0.52
PTCD2-208	ENST00000510676	HELZ	P42694	1942 aa	Known RBP	11.8	□□□□□ -0.52
PTCD2-208	ENST00000510676	CABIN1	Q9Y6J0	2220 aa		11.79	□□□□□ -0.52
PTCD2-208	ENST00000510676	KNL1	Q8NG31	2342 aa		11.79	□□□□□ -0.52
PTCD2-208	ENST00000510676	FAM149A	A5PLN7	773 aa		11.79	□□□□□ -0.52
PTCD2-208	ENST00000510676	EML1	O00423	815 aa		11.79	□□□□□ -0.52
PTCD2-208	ENST00000510676	SLC28A2	O43868	658 aa		11.79	□□□□□ -0.52
PTCD2-208	ENST00000510676	GLRA2	P23416	452 aa		11.79	□□□□□ -0.52
PTCD2-208	ENST00000510676	YWHAB	P31946	246 aa	Known RBP	11.79	□□□□□ -0.52
PTCD2-208	ENST00000510676	ZNF33A	Q06730	810 aa		11.79	□□□□□ -0.52
PTCD2-208	ENST00000510676	SOX4	Q06945	474 aa	Predicted RBP	11.79	□□□□□ -0.52
PTCD2-208	ENST00000510676	SCRN1	Q12765	414 aa		11.79	□□□□□ -0.52
PTCD2-208	ENST00000510676	PSMD2	Q13200	908 aa		11.79	□□□□□ -0.52
PTCD2-208	ENST00000510676	PKDCC	Q504Y2	493 aa		11.79	□□□□□ -0.52
PTCD2-208	ENST00000510676	TAF1B	Q53T94	588 aa	Predicted RBP	11.79	□□□□□ -0.52
PTCD2-208	ENST00000510676	GLRA4	Q5JXX5	417 aa		11.79	□□□□□ -0.52
PTCD2-208	ENST00000510676	CPA6	Q8N4T0	437 aa		11.79	□□□□□ -0.52
PTCD2-208	ENST00000510676	USP13	Q92995	863 aa	Predicted RBP	11.79	□□□□□ -0.52
PTCD2-208	ENST00000510676	SUSD3	Q96L08	255 aa		11.79	□□□□□ -0.52
PTCD2-208	ENST00000510676	CDC6	Q99741	560 aa		11.79	□□□□□ -0.52
PTCD2-208	ENST00000510676	OXCT2	Q9BYC2	517 aa	Predicted RBP	11.79	□□□□□ -0.52
PTCD2-208	ENST00000510676	FZD8	Q9H461	694 aa		11.79	□□□□□ -0.52
PTCD2-208	ENST00000510676	KIF9	Q9HAQ2	790 aa		11.79	□□□□□ -0.52
PTCD2-208	ENST00000510676	C6orf50	Q9HD87	102 aa		11.79	□□□□□ -0.52
PTCD2-208	ENST00000510676	PRMT7	Q9NVM4	692 aa	Predicted RBP	11.79	□□□□□ -0.52
PTCD2-208	ENST00000510676	IL17B	Q9UHF5	180 aa		11.79	□□□□□ -0.52
PTCD2-208	ENST00000510676	N4BP3	O15049	544 aa		11.78	□□□□□ -0.52
PTCD2-208	ENST00000510676	MARCH6	O60337	910 aa		11.78	□□□□□ -0.52
PTCD2-208	ENST00000510676	P4HB	P07237	508 aa	Known RBP	11.78	□□□□□ -0.52
PTCD2-208	ENST00000510676	CPB1	P15086	417 aa		11.78	□□□□□ -0.52
PTCD2-208	ENST00000510676	GNA11	P29992	359 aa		11.78	□□□□□ -0.52
PTCD2-208	ENST00000510676	CDC25C	P30307	473 aa		11.78	□□□□□ -0.52
PTCD2-208	ENST00000510676	ALDH1A3	P47895	512 aa		11.78	□□□□□ -0.52
PTCD2-208	ENST00000510676	MRPS21	P82921	87 aa	Known RBP	11.78	□□□□□ -0.52
PTCD2-208	ENST00000510676	RPL6	Q02878	288 aa	Known RBP	11.78	□□□□□ -0.52
PTCD2-208	ENST00000510676	DUSP4	Q13115	394 aa		11.78	□□□□□ -0.52
PTCD2-208	ENST00000510676	PPP2R5C	Q13362	524 aa		11.78	□□□□□ -0.52
PTCD2-208	ENST00000510676	PTPRN	Q16849	979 aa		11.78	□□□□□ -0.52
PTCD2-208	ENST00000510676	HSF5	Q4G112	596 aa	Predicted RBP	11.78	□□□□□ -0.52
PTCD2-208	ENST00000510676	C2orf27A	Q580R0	203 aa		11.78	□□□□□ -0.52
PTCD2-208	ENST00000510676	XKR4	Q5GH76	650 aa		11.78	□□□□□ -0.52
PTCD2-208	ENST00000510676	CDCA2	Q69YH5	1023 aa	Predicted RBP	11.78	□□□□□ -0.52
PTCD2-208	ENST00000510676	APOA5	Q6Q788	366 aa		11.78	□□□□□ -0.52
PTCD2-208	ENST00000510676	SLC36A4	Q6YBV0	504 aa		11.78	□□□□□ -0.52
PTCD2-208	ENST00000510676	OTUD6A	Q7L8S5	288 aa		11.78	□□□□□ -0.52
PTCD2-208	ENST00000510676	APPL2	Q8NEU8	664 aa		11.78	□□□□□ -0.52
PTCD2-208	ENST00000510676	BAP1	Q92560	729 aa		11.78	□□□□□ -0.52
PTCD2-208	ENST00000510676	FAM124B	Q9H5Z6	455 aa	Predicted RBP	11.78	□□□□□ -0.52
PTCD2-208	ENST00000510676	VAV3	Q9UKW4	847 aa		11.78	□□□□□ -0.52
PTCD2-208	ENST00000510676	SMIM28	A0A1B0GU29	152 aa		11.77	□□□□□ -0.53
PTCD2-208	ENST00000510676	PODXL	O00592	558 aa		11.77	□□□□□ -0.53
PTCD2-208	ENST00000510676	OAZ2	O95190	189 aa		11.77	□□□□□ -0.53
PTCD2-208	ENST00000510676	PYGB	P11216	843 aa		11.77	□□□□□ -0.53
PTCD2-208	ENST00000510676	GP1BB	P13224	206 aa		11.77	□□□□□ -0.53
PTCD2-208	ENST00000510676	CYP4F8	P98187	520 aa		11.77	□□□□□ -0.53
PTCD2-208	ENST00000510676	HNRNPU	Q00839	825 aa	Known RBP eCLIP	11.77	□□□□□ -0.53
PTCD2-208	ENST00000510676	GRIK2	Q13002	908 aa		11.77	□□□□□ -0.53
PTCD2-208	ENST00000510676	GPR17	Q13304	367 aa		11.77	□□□□□ -0.53
PTCD2-208	ENST00000510676	ZNF268	Q14587	947 aa	Predicted RBP	11.77	□□□□□ -0.53
PTCD2-208	ENST00000510676	PLEKHG6	Q3KR16	790 aa		11.77	□□□□□ -0.53
PTCD2-208	ENST00000510676	CENPP	Q6IPU0	288 aa		11.77	□□□□□ -0.53
PTCD2-208	ENST00000510676	ALKAL1	Q6UXT8	129 aa		11.77	□□□□□ -0.53
PTCD2-208	ENST00000510676	ITIH5	Q86UX2	942 aa		11.77	□□□□□ -0.53
PTCD2-208	ENST00000510676	NOSTRIN	Q8IVI9	506 aa		11.77	□□□□□ -0.53
PTCD2-208	ENST00000510676	SLC41A1	Q8IVJ1	513 aa		11.77	□□□□□ -0.53
PTCD2-208	ENST00000510676	CCDC33	Q8N5R6	958 aa		11.77	□□□□□ -0.53
PTCD2-208	ENST00000510676	CCDC12	Q8WUD4	166 aa	Predicted RBP	11.77	□□□□□ -0.53
PTCD2-208	ENST00000510676	TDP1	Q9NUW8	608 aa		11.77	□□□□□ -0.53
PTCD2-208	ENST00000510676	HSFX1	Q9UBD0	423 aa		11.77	□□□□□ -0.53
PTCD2-208	ENST00000510676	NXF1	Q9UBU9	619 aa	Known RBP	11.77	□□□□□ -0.53
PTCD2-208	ENST00000510676	PCDHGB2	Q9Y5G2	931 aa		11.77	□□□□□ -0.53
PTCD2-208	ENST00000510676	SPTBN1	Q01082	2364 aa	Known RBP	11.76	□□□□□ -0.53
PTCD2-208	ENST00000510676	ANTXRL	A6NF34	631 aa		11.76	□□□□□ -0.53
PTCD2-208	ENST00000510676	PLK4	O00444	970 aa		11.76	□□□□□ -0.53
PTCD2-208	ENST00000510676	RPL9	P32969	192 aa	Known RBP	11.76	□□□□□ -0.53
PTCD2-208	ENST00000510676	AVPR1A	P37288	418 aa		11.76	□□□□□ -0.53
PTCD2-208	ENST00000510676	CXADR	P78310	365 aa		11.76	□□□□□ -0.53
PTCD2-208	ENST00000510676	RTN1	Q16799	776 aa		11.76	□□□□□ -0.53
PTCD2-208	ENST00000510676	XKR9	Q5GH70	373 aa		11.76	□□□□□ -0.53
PTCD2-208	ENST00000510676	CC2D1A	Q6P1N0	951 aa	Predicted RBP	11.76	□□□□□ -0.53
PTCD2-208	ENST00000510676	TMPRSS12	Q86WS5	348 aa		11.76	□□□□□ -0.53
PTCD2-208	ENST00000510676	IL17RC	Q8NAC3	791 aa		11.76	□□□□□ -0.53
PTCD2-208	ENST00000510676	BICD2	Q8TD16	824 aa		11.76	□□□□□ -0.53
PTCD2-208	ENST00000510676	SETD7	Q8WTS6	366 aa	Known RBP	11.76	□□□□□ -0.53
PTCD2-208	ENST00000510676	OSCP1	Q8WVF1	389 aa		11.76	□□□□□ -0.53
PTCD2-208	ENST00000510676	DDX12P	Q92771	950 aa		11.76	□□□□□ -0.53
PTCD2-208	ENST00000510676	ATP2A3	Q93084	1043 aa		11.76	□□□□□ -0.53
PTCD2-208	ENST00000510676	LXN	Q9BS40	222 aa		11.76	□□□□□ -0.53
PTCD2-208	ENST00000510676	LNPK	Q9C0E8	428 aa		11.76	□□□□□ -0.53
PTCD2-208	ENST00000510676	SLC38A7	Q9NVC3	462 aa		11.76	□□□□□ -0.53
PTCD2-208	ENST00000510676	ANKMY1	Q9P2S6	941 aa		11.76	□□□□□ -0.53
PTCD2-208	ENST00000510676	SUSD2	Q9UGT4	822 aa		11.76	□□□□□ -0.53
PTCD2-208	ENST00000510676	RCAN3	Q9UKA8	241 aa		11.76	□□□□□ -0.53
PTCD2-208	ENST00000510676	CIZ1	Q9ULV3	898 aa	Predicted RBP	11.76	□□□□□ -0.53
PTCD2-208	ENST00000510676	GDA	Q9Y2T3	454 aa		11.76	□□□□□ -0.53
PTCD2-208	ENST00000510676	SGK1	O00141	431 aa		11.75	□□□□□ -0.53
PTCD2-208	ENST00000510676	ZBTB39	O15060	712 aa		11.75	□□□□□ -0.53
PTCD2-208	ENST00000510676	FLRT2	O43155	660 aa		11.75	□□□□□ -0.53
PTCD2-208	ENST00000510676	DGAT1	O75907	488 aa		11.75	□□□□□ -0.53

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