RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 DERAQ9Y315 318 aa11.27□□□□□ -0.61
DDX41-211ENST00000510171 ANO9A1A5B4 782 aa11.26□□□□□ -0.61
DDX41-211ENST00000510171 VWA3AA6NCI4 1184 aa11.26□□□□□ -0.61
DDX41-211ENST00000510171 CYB561D2O14569 222 aa11.26□□□□□ -0.61
DDX41-211ENST00000510171 TRDMT1O14717 391 aaKnown RBP11.26□□□□□ -0.61
DDX41-211ENST00000510171 TM4SF5O14894 197 aa11.26□□□□□ -0.61
DDX41-211ENST00000510171 FAM13AO94988 1023 aa11.26□□□□□ -0.61
DDX41-211ENST00000510171 NFICP08651 508 aa11.26□□□□□ -0.61
DDX41-211ENST00000510171 HAPLN1P10915 354 aaPredicted RBP11.26□□□□□ -0.61
DDX41-211ENST00000510171 ATF6P18850 670 aa11.26□□□□□ -0.61
DDX41-211ENST00000510171 AVPR1AP37288 418 aa11.26□□□□□ -0.61
DDX41-211ENST00000510171 RAP1GAPP47736 663 aa11.26□□□□□ -0.61
DDX41-211ENST00000510171 TMEM196Q5HYL7 178 aa11.26□□□□□ -0.61
DDX41-211ENST00000510171 N4BP2L1Q5TBK1 243 aaPredicted RBP11.26□□□□□ -0.61
DDX41-211ENST00000510171 MCTP1Q6DN14 999 aa11.26□□□□□ -0.61
DDX41-211ENST00000510171 FSTL4Q6MZW2 842 aa11.26□□□□□ -0.61
DDX41-211ENST00000510171 PKN3Q6P5Z2 889 aa11.26□□□□□ -0.61
DDX41-211ENST00000510171 KBTBD6Q86V97 674 aa11.26□□□□□ -0.61
DDX41-211ENST00000510171 LRRTM3Q86VH5 581 aa11.26□□□□□ -0.61
DDX41-211ENST00000510171 CAMKK1Q8N5S9 505 aa11.26□□□□□ -0.61
DDX41-211ENST00000510171 SPPL2BQ8TCT7 592 aa11.26□□□□□ -0.61
DDX41-211ENST00000510171 FAM83CQ9BQN1 747 aa11.26□□□□□ -0.61
DDX41-211ENST00000510171 PYM1Q9BRP8 204 aaKnown RBP11.26□□□□□ -0.61
DDX41-211ENST00000510171 ASB7Q9H672 318 aa11.26□□□□□ -0.61
DDX41-211ENST00000510171 PCDHGA5Q9Y5G8 931 aa11.26□□□□□ -0.61
DDX41-211ENST00000510171 K7ENM7 598 aa11.25□□□□□ -0.61
DDX41-211ENST00000510171 TRAK2O60296 914 aa11.25□□□□□ -0.61
DDX41-211ENST00000510171 AKAP3O75969 853 aa11.25□□□□□ -0.61
DDX41-211ENST00000510171 EPN2O95208 641 aa11.25□□□□□ -0.61
DDX41-211ENST00000510171 DDX6P26196 483 aaKnown RBP eCLIP11.25□□□□□ -0.61
DDX41-211ENST00000510171 PMLP29590 882 aa11.25□□□□□ -0.61
DDX41-211ENST00000510171 ABCD1P33897 745 aa11.25□□□□□ -0.61
DDX41-211ENST00000510171 ACOT2P49753 483 aa11.25□□□□□ -0.61
DDX41-211ENST00000510171 TAF6P49848 677 aa11.25□□□□□ -0.61
DDX41-211ENST00000510171 BFSP1Q12934 665 aa11.25□□□□□ -0.61
DDX41-211ENST00000510171 DHX8Q14562 1220 aaKnown RBP11.25□□□□□ -0.61
DDX41-211ENST00000510171 TMEM119Q4V9L6 283 aa11.25□□□□□ -0.61
DDX41-211ENST00000510171 STPG1Q5TH74 334 aa11.25□□□□□ -0.61
DDX41-211ENST00000510171 WSCD1Q658N2 575 aa11.25□□□□□ -0.61
DDX41-211ENST00000510171 ARL6IP4Q66PJ3 421 aaKnown RBP11.25□□□□□ -0.61
DDX41-211ENST00000510171 TRIM68Q6AZZ1 485 aa11.25□□□□□ -0.61
DDX41-211ENST00000510171 CC2D1AQ6P1N0 951 aaPredicted RBP11.25□□□□□ -0.61
DDX41-211ENST00000510171 GPBP1Q86WP2 473 aa11.25□□□□□ -0.61
DDX41-211ENST00000510171 DCP1BQ8IZD4 617 aaKnown RBP11.25□□□□□ -0.61
DDX41-211ENST00000510171 MAB21L3Q8N8X9 362 aa11.25□□□□□ -0.61
DDX41-211ENST00000510171 USP13Q92995 863 aaPredicted RBP11.25□□□□□ -0.61
DDX41-211ENST00000510171 EXOC4Q96A65 974 aa11.25□□□□□ -0.61
DDX41-211ENST00000510171 ZC3H10Q96K80 434 aaKnown RBP11.25□□□□□ -0.61
DDX41-211ENST00000510171 REEP2Q9BRK0 252 aa11.25□□□□□ -0.61
DDX41-211ENST00000510171 ZHX3Q9H4I2 956 aa11.25□□□□□ -0.61
DDX41-211ENST00000510171 EBF3Q9H4W6 596 aa11.25□□□□□ -0.61
DDX41-211ENST00000510171 PARVGQ9HBI0 331 aa11.25□□□□□ -0.61
DDX41-211ENST00000510171 HPS4Q9NQG7 708 aa11.25□□□□□ -0.61
DDX41-211ENST00000510171 RXFP3Q9NSD7 469 aa11.25□□□□□ -0.61
DDX41-211ENST00000510171 TDP1Q9NUW8 608 aa11.25□□□□□ -0.61
DDX41-211ENST00000510171 ABI2Q9NYB9 513 aaPredicted RBP11.25□□□□□ -0.61
DDX41-211ENST00000510171 C2CD2Q9Y426 696 aa11.25□□□□□ -0.61
DDX41-211ENST00000510171 OTOL1A6NHN0 477 aaPredicted RBP11.24□□□□□ -0.61
DDX41-211ENST00000510171 SOBPA7XYQ1 873 aa11.24□□□□□ -0.61
DDX41-211ENST00000510171 SLC26A4O43511 780 aa11.24□□□□□ -0.61
DDX41-211ENST00000510171 RNF40O75150 1001 aa11.24□□□□□ -0.61
DDX41-211ENST00000510171 EGFP01133 1207 aa11.24□□□□□ -0.61
DDX41-211ENST00000510171 F11P03951 625 aa11.24□□□□□ -0.61
DDX41-211ENST00000510171 KRT18P05783 430 aaKnown RBP11.24□□□□□ -0.61
DDX41-211ENST00000510171 DRD1P21728 446 aa11.24□□□□□ -0.61
DDX41-211ENST00000510171 UBA7P41226 1012 aa11.24□□□□□ -0.61
DDX41-211ENST00000510171 GALK1P51570 392 aa11.24□□□□□ -0.61
DDX41-211ENST00000510171 ZNF131P52739 623 aa11.24□□□□□ -0.61
DDX41-211ENST00000510171 NLRP12P59046 1061 aa11.24□□□□□ -0.61
DDX41-211ENST00000510171 SHC2P98077 582 aa11.24□□□□□ -0.61
DDX41-211ENST00000510171 PDGFRLQ15198 375 aa11.24□□□□□ -0.61
DDX41-211ENST00000510171 FBXO43Q4G163 708 aa11.24□□□□□ -0.61
DDX41-211ENST00000510171 PLA2G2CQ5R387 149 aa11.24□□□□□ -0.61
DDX41-211ENST00000510171 ADALQ6DHV7 355 aa11.24□□□□□ -0.61
DDX41-211ENST00000510171 SLFN12LQ6IEE8 588 aa11.24□□□□□ -0.61
DDX41-211ENST00000510171 SLC39A4Q6P5W5 647 aa11.24□□□□□ -0.61
DDX41-211ENST00000510171 MON1AQ86VX9 555 aa11.24□□□□□ -0.61
DDX41-211ENST00000510171 MRPS31Q92665 395 aaKnown RBP11.24□□□□□ -0.61
DDX41-211ENST00000510171 CALML4Q96GE6 196 aa11.24□□□□□ -0.61
DDX41-211ENST00000510171 AK8Q96MA6 479 aa11.24□□□□□ -0.61
DDX41-211ENST00000510171 KIF9Q9HAQ2 790 aa11.24□□□□□ -0.61
DDX41-211ENST00000510171 VPS45Q9NRW7 570 aa11.24□□□□□ -0.61
DDX41-211ENST00000510171 DPP3Q9NY33 737 aa11.24□□□□□ -0.61
DDX41-211ENST00000510171 CCL26Q9Y258 94 aa11.24□□□□□ -0.61
DDX41-211ENST00000510171 PCDHB5Q9Y5E4 795 aa11.24□□□□□ -0.61
DDX41-211ENST00000510171 CACNA1BQ00975 2339 aa11.24□□□□□ -0.61
DDX41-211ENST00000510171 TPRP12270 2363 aaKnown RBP11.24□□□□□ -0.61
DDX41-211ENST00000510171 KPNA7A9QM74 516 aa11.23□□□□□ -0.61
DDX41-211ENST00000510171 ANKRD63C9JTQ0 380 aa11.23□□□□□ -0.61
DDX41-211ENST00000510171 PRPF40AO75400 957 aaKnown RBP11.23□□□□□ -0.61
DDX41-211ENST00000510171 CSH1P0DML2 217 aa11.23□□□□□ -0.61
DDX41-211ENST00000510171 CSH2P0DML3 217 aa11.23□□□□□ -0.61
DDX41-211ENST00000510171 ARSAP15289 507 aa11.23□□□□□ -0.61
DDX41-211ENST00000510171 HMGA1P17096 107 aaKnown RBP11.23□□□□□ -0.61
DDX41-211ENST00000510171 NMT1P30419 496 aaKnown RBP11.23□□□□□ -0.61
DDX41-211ENST00000510171 MPLP40238 635 aa11.23□□□□□ -0.61
DDX41-211ENST00000510171 GTF2BQ00403 316 aa11.23□□□□□ -0.61
DDX41-211ENST00000510171 POU5F1Q01860 360 aaKnown RBP11.23□□□□□ -0.61
DDX41-211ENST00000510171 PLK5Q496M5 336 aa11.23□□□□□ -0.61
DDX41-211ENST00000510171 TXNDC8Q6A555 127 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms