RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 CCDC47Q96A33 483 aaKnown RBP9.4□□□□□ -0.9
PDLIM5-213ENST00000509357 CCDC127Q96BQ5 260 aa9.4□□□□□ -0.9
PDLIM5-213ENST00000509357 MCRS1Q96EZ8 462 aa9.4□□□□□ -0.9
PDLIM5-213ENST00000509357 DHTKD1Q96HY7 919 aaPredicted RBP9.4□□□□□ -0.9
PDLIM5-213ENST00000509357 ANKRD36BP1Q96IX9 119 aa9.4□□□□□ -0.9
PDLIM5-213ENST00000509357 CGRRF1Q99675 332 aa9.4□□□□□ -0.9
PDLIM5-213ENST00000509357 RTP3Q9BQQ7 232 aa9.4□□□□□ -0.9
PDLIM5-213ENST00000509357 CGNQ9P2M7 1197 aaKnown RBP9.4□□□□□ -0.9
PDLIM5-213ENST00000509357 MAFFQ9ULX9 164 aa9.4□□□□□ -0.9
PDLIM5-213ENST00000509357 DUSP12Q9UNI6 340 aa9.4□□□□□ -0.9
PDLIM5-213ENST00000509357 NUMBLQ9Y6R0 609 aa9.4□□□□□ -0.9
PDLIM5-213ENST00000509357 NOTCH4Q99466 2003 aa9.39□□□□□ -0.91
PDLIM5-213ENST00000509357 SYCE3A1L190 88 aa9.39□□□□□ -0.91
PDLIM5-213ENST00000509357 KPNA7A9QM74 516 aa9.39□□□□□ -0.91
PDLIM5-213ENST00000509357 NARSO43776 548 aaKnown RBP9.39□□□□□ -0.91
PDLIM5-213ENST00000509357 CALUO43852 315 aaPredicted RBP9.39□□□□□ -0.91
PDLIM5-213ENST00000509357 HUS1O60921 280 aa9.39□□□□□ -0.91
PDLIM5-213ENST00000509357 PAPLNO95428 1278 aa9.39□□□□□ -0.91
PDLIM5-213ENST00000509357 VNN2O95498 520 aa9.39□□□□□ -0.91
PDLIM5-213ENST00000509357 PDGFBP01127 241 aaPredicted RBP9.39□□□□□ -0.91
PDLIM5-213ENST00000509357 DLATP10515 647 aaKnown RBP9.39□□□□□ -0.91
PDLIM5-213ENST00000509357 MYL4P12829 197 aa9.39□□□□□ -0.91
PDLIM5-213ENST00000509357 AVPR2P30518 371 aa9.39□□□□□ -0.91
PDLIM5-213ENST00000509357 PLA2G5P39877 138 aa9.39□□□□□ -0.91
PDLIM5-213ENST00000509357 CDR1P51861 262 aa9.39□□□□□ -0.91
PDLIM5-213ENST00000509357 RBP5P82980 135 aa9.39□□□□□ -0.91
PDLIM5-213ENST00000509357 LRRC63Q05C16 580 aa9.39□□□□□ -0.91
PDLIM5-213ENST00000509357 TYRO3Q06418 890 aa9.39□□□□□ -0.91
PDLIM5-213ENST00000509357 BFSP1Q12934 665 aa9.39□□□□□ -0.91
PDLIM5-213ENST00000509357 DUSP4Q13115 394 aa9.39□□□□□ -0.91
PDLIM5-213ENST00000509357 GPR17Q13304 367 aa9.39□□□□□ -0.91
PDLIM5-213ENST00000509357 MYBPC2Q14324 1141 aa9.39□□□□□ -0.91
PDLIM5-213ENST00000509357 SURF1Q15526 300 aa9.39□□□□□ -0.91
PDLIM5-213ENST00000509357 TAF12Q16514 161 aa9.39□□□□□ -0.91
PDLIM5-213ENST00000509357 ZSCAN23Q3MJ62 389 aa9.39□□□□□ -0.91
PDLIM5-213ENST00000509357 SLC39A12Q504Y0 691 aa9.39□□□□□ -0.91
PDLIM5-213ENST00000509357 HSP90AA4PQ58FG1 418 aa9.39□□□□□ -0.91
PDLIM5-213ENST00000509357 MTSS1LQ765P7 747 aa9.39□□□□□ -0.91
PDLIM5-213ENST00000509357 OSTM1Q86WC4 334 aa9.39□□□□□ -0.91
PDLIM5-213ENST00000509357 FAM186BQ8IYM0 893 aa9.39□□□□□ -0.91
PDLIM5-213ENST00000509357 SIX5Q8N196 739 aa9.39□□□□□ -0.91
PDLIM5-213ENST00000509357 SLC35C1Q96A29 364 aa9.39□□□□□ -0.91
PDLIM5-213ENST00000509357 FNBP1Q96RU3 617 aa9.39□□□□□ -0.91
PDLIM5-213ENST00000509357 TMEM209Q96SK2 561 aa9.39□□□□□ -0.91
PDLIM5-213ENST00000509357 SEPT5Q99719 369 aaPredicted RBP9.39□□□□□ -0.91
PDLIM5-213ENST00000509357 PRRX2Q99811 253 aa9.39□□□□□ -0.91
PDLIM5-213ENST00000509357 SDCBP2Q9H190 292 aa9.39□□□□□ -0.91
PDLIM5-213ENST00000509357 XYLT2Q9H1B5 865 aa9.39□□□□□ -0.91
PDLIM5-213ENST00000509357 DNAJC25Q9H1X3 360 aa9.39□□□□□ -0.91
PDLIM5-213ENST00000509357 SLITRK6Q9H5Y7 841 aa9.39□□□□□ -0.91
PDLIM5-213ENST00000509357 APOBEC3GQ9HC16 384 aaKnown RBP9.39□□□□□ -0.91
PDLIM5-213ENST00000509357 KIAA1586Q9HCI6 787 aa9.39□□□□□ -0.91
PDLIM5-213ENST00000509357 ASAH2Q9NR71 780 aa9.39□□□□□ -0.91
PDLIM5-213ENST00000509357 SAMSN1Q9NSI8 373 aaKnown RBP9.39□□□□□ -0.91
PDLIM5-213ENST00000509357 RWDD2AQ9UIY3 292 aa9.39□□□□□ -0.91
PDLIM5-213ENST00000509357 HOOK1Q9UJC3 728 aaKnown RBP9.39□□□□□ -0.91
PDLIM5-213ENST00000509357 ITGA11Q9UKX5 1188 aa9.39□□□□□ -0.91
PDLIM5-213ENST00000509357 CA14Q9ULX7 337 aa9.39□□□□□ -0.91
PDLIM5-213ENST00000509357 SLC27A5Q9Y2P5 690 aa9.39□□□□□ -0.91
PDLIM5-213ENST00000509357 ARIH1Q9Y4X5 557 aaPredicted RBP9.39□□□□□ -0.91
PDLIM5-213ENST00000509357 TECTAO75443 2155 aa9.39□□□□□ -0.91
PDLIM5-213ENST00000509357 ANHXE9PGG2 379 aa9.38□□□□□ -0.91
PDLIM5-213ENST00000509357 MAPK13O15264 365 aa9.38□□□□□ -0.91
PDLIM5-213ENST00000509357 CYP11A1P05108 521 aa9.38□□□□□ -0.91
PDLIM5-213ENST00000509357 SRFP11831 508 aa9.38□□□□□ -0.91
PDLIM5-213ENST00000509357 TNNI1P19237 187 aa9.38□□□□□ -0.91
PDLIM5-213ENST00000509357 VCPP55072 806 aaKnown RBP9.38□□□□□ -0.91
PDLIM5-213ENST00000509357 TSPY1Q01534 308 aa9.38□□□□□ -0.91
PDLIM5-213ENST00000509357 MYO1EQ12965 1108 aa9.38□□□□□ -0.91
PDLIM5-213ENST00000509357 HTR4Q13639 388 aa9.38□□□□□ -0.91
PDLIM5-213ENST00000509357 DUOXA2Q1HG44 320 aa9.38□□□□□ -0.91
PDLIM5-213ENST00000509357 MGAT5BQ3V5L5 792 aa9.38□□□□□ -0.91
PDLIM5-213ENST00000509357 ZACNQ401N2 412 aa9.38□□□□□ -0.91
PDLIM5-213ENST00000509357 WSCD1Q658N2 575 aa9.38□□□□□ -0.91
PDLIM5-213ENST00000509357 SPOPLQ6IQ16 392 aa9.38□□□□□ -0.91
PDLIM5-213ENST00000509357 DPY19L2P1Q6NXN4 242 aa9.38□□□□□ -0.91
PDLIM5-213ENST00000509357 FOXR2Q6PJQ5 311 aa9.38□□□□□ -0.91
PDLIM5-213ENST00000509357 PARM1Q6UWI2 310 aa9.38□□□□□ -0.91
PDLIM5-213ENST00000509357 SV2AQ7L0J3 742 aa9.38□□□□□ -0.91
PDLIM5-213ENST00000509357 APTXQ7Z2E3 356 aaKnown RBP9.38□□□□□ -0.91
PDLIM5-213ENST00000509357 TRAPPC11Q7Z392 1133 aa9.38□□□□□ -0.91
PDLIM5-213ENST00000509357 LIMS2Q7Z4I7 341 aa9.38□□□□□ -0.91
PDLIM5-213ENST00000509357 WDR49Q8IV35 697 aa9.38□□□□□ -0.91
PDLIM5-213ENST00000509357 TRIM59Q8IWR1 403 aa9.38□□□□□ -0.91
PDLIM5-213ENST00000509357 DHX40Q8IX18 779 aaKnown RBP9.38□□□□□ -0.91
PDLIM5-213ENST00000509357 NPAS3Q8IXF0 933 aa9.38□□□□□ -0.91
PDLIM5-213ENST00000509357 DCP1BQ8IZD4 617 aaKnown RBP9.38□□□□□ -0.91
PDLIM5-213ENST00000509357 HS6ST3Q8IZP7 471 aa9.38□□□□□ -0.91
PDLIM5-213ENST00000509357 MLKLQ8NB16 471 aa9.38□□□□□ -0.91
PDLIM5-213ENST00000509357 ATAD1Q8NBU5 361 aa9.38□□□□□ -0.91
PDLIM5-213ENST00000509357 GOLGA5Q8TBA6 731 aa9.38□□□□□ -0.91
PDLIM5-213ENST00000509357 TMC2Q8TDI7 906 aa9.38□□□□□ -0.91
PDLIM5-213ENST00000509357 TAS1R2Q8TE23 839 aa9.38□□□□□ -0.91
PDLIM5-213ENST00000509357 FGF14Q92915 247 aa9.38□□□□□ -0.91
PDLIM5-213ENST00000509357 CCDC34Q96HJ3 373 aa9.38□□□□□ -0.91
PDLIM5-213ENST00000509357 KXD1Q9BQD3 176 aa9.38□□□□□ -0.91
PDLIM5-213ENST00000509357 SRRTQ9BXP5 876 aaKnown RBP9.38□□□□□ -0.91
PDLIM5-213ENST00000509357 KCNH6Q9H252 994 aa9.38□□□□□ -0.91
PDLIM5-213ENST00000509357 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.38□□□□□ -0.911e-6■■■■■ 99.3
PDLIM5-213ENST00000509357 GDE1Q9NZC3 331 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms