RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 HTR4Q13639 388 aa17.32■□□□□ 0.36
PDLIM5-212ENST00000509333 ZCWPW2Q504Y3 356 aa17.32■□□□□ 0.36
PDLIM5-212ENST00000509333 CYP4A22Q5TCH4 519 aa17.32■□□□□ 0.36
PDLIM5-212ENST00000509333 ZNF658Q5TYW1 1059 aaPredicted RBP17.32■□□□□ 0.36
PDLIM5-212ENST00000509333 FAM171BQ6P995 826 aa17.32■□□□□ 0.36
PDLIM5-212ENST00000509333 PARM1Q6UWI2 310 aa17.32■□□□□ 0.36
PDLIM5-212ENST00000509333 NPAS3Q8IXF0 933 aa17.32■□□□□ 0.36
PDLIM5-212ENST00000509333 SMYD4Q8IYR2 804 aaPredicted RBP17.32■□□□□ 0.36
PDLIM5-212ENST00000509333 TTC9BQ8N6N2 239 aa17.32■□□□□ 0.36
PDLIM5-212ENST00000509333 C2orf15Q8WU43 125 aaKnown RBP17.32■□□□□ 0.36
PDLIM5-212ENST00000509333 PBXIP1Q96AQ6 731 aa17.32■□□□□ 0.36
PDLIM5-212ENST00000509333 MCRS1Q96EZ8 462 aa17.32■□□□□ 0.36
PDLIM5-212ENST00000509333 PKMYT1Q99640 499 aa17.32■□□□□ 0.36
PDLIM5-212ENST00000509333 XYLT2Q9H1B5 865 aa17.32■□□□□ 0.36
PDLIM5-212ENST00000509333 RMND1Q9NWS8 449 aa17.32■□□□□ 0.36
PDLIM5-212ENST00000509333 GDE1Q9NZC3 331 aa17.32■□□□□ 0.36
PDLIM5-212ENST00000509333 YIPF1Q9Y548 306 aa17.32■□□□□ 0.36
PDLIM5-212ENST00000509333 ASB3Q9Y575 518 aa17.32■□□□□ 0.36
PDLIM5-212ENST00000509333 HCRTO43612 131 aa17.31■□□□□ 0.36
PDLIM5-212ENST00000509333 SOAT2O75908 522 aa17.31■□□□□ 0.36
PDLIM5-212ENST00000509333 AKAP3O75969 853 aa17.31■□□□□ 0.36
PDLIM5-212ENST00000509333 STAU1O95793 577 aaKnown RBP17.31■□□□□ 0.36
PDLIM5-212ENST00000509333 HAPLN1P10915 354 aaPredicted RBP17.31■□□□□ 0.36
PDLIM5-212ENST00000509333 ACAT1P24752 427 aaKnown RBP17.31■□□□□ 0.36
PDLIM5-212ENST00000509333 RPL13P26373 211 aaKnown RBP17.31■□□□□ 0.36
PDLIM5-212ENST00000509333 ATICP31939 592 aa17.31■□□□□ 0.36
PDLIM5-212ENST00000509333 EPHB3P54753 998 aa17.31■□□□□ 0.36
PDLIM5-212ENST00000509333 MYL7Q01449 175 aa17.31■□□□□ 0.36
PDLIM5-212ENST00000509333 PLD1Q13393 1074 aa17.31■□□□□ 0.36
PDLIM5-212ENST00000509333 COBLL1Q53SF7 1204 aa17.31■□□□□ 0.36
PDLIM5-212ENST00000509333 CEP135Q66GS9 1140 aa17.31■□□□□ 0.36
PDLIM5-212ENST00000509333 ELMOD1Q8N336 334 aa17.31■□□□□ 0.36
PDLIM5-212ENST00000509333 SPPL2BQ8TCT7 592 aa17.31■□□□□ 0.36
PDLIM5-212ENST00000509333 KBTBD7Q8WVZ9 684 aa17.31■□□□□ 0.36
PDLIM5-212ENST00000509333 FGF14Q92915 247 aa17.31■□□□□ 0.36
PDLIM5-212ENST00000509333 RAPGEFL1Q9UHV5 662 aa17.31■□□□□ 0.36
PDLIM5-212ENST00000509333 GTF3C4Q9UKN8 822 aa17.31■□□□□ 0.36
PDLIM5-212ENST00000509333 FRMD4BQ9Y2L6 1034 aa17.31■□□□□ 0.36
PDLIM5-212ENST00000509333 ZDBF2Q9HCK1 2354 aa17.31■□□□□ 0.36
PDLIM5-212ENST00000509333 MYBPHLA2RUH7 354 aa17.3■□□□□ 0.36
PDLIM5-212ENST00000509333 NARSO43776 548 aaKnown RBP17.3■□□□□ 0.36
PDLIM5-212ENST00000509333 ATP2C2O75185 946 aa17.3■□□□□ 0.36
PDLIM5-212ENST00000509333 TACC1O75410 805 aa17.3■□□□□ 0.36
PDLIM5-212ENST00000509333 VNN1O95497 513 aa17.3■□□□□ 0.36
PDLIM5-212ENST00000509333 WARSP23381 471 aaKnown RBP17.3■□□□□ 0.36
PDLIM5-212ENST00000509333 NR2F2P24468 414 aa17.3■□□□□ 0.36
PDLIM5-212ENST00000509333 GNL1P36915 607 aaPredicted RBP17.3■□□□□ 0.36
PDLIM5-212ENST00000509333 TSPY1Q01534 308 aa17.3■□□□□ 0.36
PDLIM5-212ENST00000509333 TRPC3Q13507 836 aa17.3■□□□□ 0.36
PDLIM5-212ENST00000509333 NFE2Q16621 373 aaPredicted RBP17.3■□□□□ 0.36
PDLIM5-212ENST00000509333 WDR72Q3MJ13 1102 aa17.3■□□□□ 0.36
PDLIM5-212ENST00000509333 INTS6LQ5JSJ4 861 aaKnown RBP17.3■□□□□ 0.36
PDLIM5-212ENST00000509333 TDRD10Q5VZ19 366 aaKnown RBP17.3■□□□□ 0.36
PDLIM5-212ENST00000509333 SV2AQ7L0J3 742 aa17.3■□□□□ 0.36
PDLIM5-212ENST00000509333 ADGRF2Q8IZF7 708 aa17.3■□□□□ 0.36
PDLIM5-212ENST00000509333 LEMD2Q8NC56 503 aa17.3■□□□□ 0.36
PDLIM5-212ENST00000509333 ING5Q8WYH8 240 aa17.3■□□□□ 0.36
PDLIM5-212ENST00000509333 SMARCE1Q969G3 411 aa17.3■□□□□ 0.36
PDLIM5-212ENST00000509333 ZSWIM3Q96MP5 696 aa17.3■□□□□ 0.36
PDLIM5-212ENST00000509333 MRPL45Q9BRJ2 306 aaKnown RBP17.3■□□□□ 0.36
PDLIM5-212ENST00000509333 VRTNQ9H8Y1 702 aa17.3■□□□□ 0.36
PDLIM5-212ENST00000509333 HOOK1Q9UJC3 728 aaKnown RBP17.3■□□□□ 0.36
PDLIM5-212ENST00000509333 DUSP12Q9UNI6 340 aa17.3■□□□□ 0.36
PDLIM5-212ENST00000509333 NME7Q9Y5B8 376 aa17.3■□□□□ 0.36
PDLIM5-212ENST00000509333 PCDHB5Q9Y5E4 795 aa17.3■□□□□ 0.36
PDLIM5-212ENST00000509333 NUMBLQ9Y6R0 609 aa17.3■□□□□ 0.36
PDLIM5-212ENST00000509333 PHACTR2O75167 634 aa17.29■□□□□ 0.36
PDLIM5-212ENST00000509333 PDGFBP01127 241 aaPredicted RBP17.29■□□□□ 0.36
PDLIM5-212ENST00000509333 PDGFRBP09619 1106 aa17.29■□□□□ 0.36
PDLIM5-212ENST00000509333 MYL4P12829 197 aa17.29■□□□□ 0.36
PDLIM5-212ENST00000509333 GJA1P17302 382 aa17.29■□□□□ 0.36
PDLIM5-212ENST00000509333 CEBPBP17676 345 aa17.29■□□□□ 0.36
PDLIM5-212ENST00000509333 PCSK1P29120 753 aa17.29■□□□□ 0.36
PDLIM5-212ENST00000509333 PSMC2P35998 433 aaKnown RBP17.29■□□□□ 0.36
PDLIM5-212ENST00000509333 VAMP7P51809 220 aa17.29■□□□□ 0.36
PDLIM5-212ENST00000509333 EDRF1Q3B7T1 1238 aa17.29■□□□□ 0.36
PDLIM5-212ENST00000509333 MGAT5BQ3V5L5 792 aa17.29■□□□□ 0.36
PDLIM5-212ENST00000509333 ZACNQ401N2 412 aa17.29■□□□□ 0.36
PDLIM5-212ENST00000509333 ANKRD40Q6AI12 368 aa17.29■□□□□ 0.36
PDLIM5-212ENST00000509333 PDZD4Q76G19 769 aaPredicted RBP17.29■□□□□ 0.36
PDLIM5-212ENST00000509333 TMC8Q8IU68 726 aa17.29■□□□□ 0.36
PDLIM5-212ENST00000509333 ADSSL1Q8N142 457 aa17.29■□□□□ 0.36
PDLIM5-212ENST00000509333 PSMG2Q969U7 264 aa17.29■□□□□ 0.36
PDLIM5-212ENST00000509333 MMS19Q96T76 1030 aa17.29■□□□□ 0.36
PDLIM5-212ENST00000509333 KINO60870 393 aaKnown RBP17.28■□□□□ 0.36
PDLIM5-212ENST00000509333 ATF6P18850 670 aa17.28■□□□□ 0.36
PDLIM5-212ENST00000509333 CYP2F1P24903 491 aa17.28■□□□□ 0.36
PDLIM5-212ENST00000509333 ANP32AP39687 249 aaKnown RBP17.28■□□□□ 0.36
PDLIM5-212ENST00000509333 ENPEPQ07075 957 aa17.28■□□□□ 0.36
PDLIM5-212ENST00000509333 BIRC3Q13489 604 aa17.28■□□□□ 0.36
PDLIM5-212ENST00000509333 NCOA4Q13772 614 aa17.28■□□□□ 0.36
PDLIM5-212ENST00000509333 SGSM1Q2NKQ1 1148 aa17.28■□□□□ 0.36
PDLIM5-212ENST00000509333 ISM2Q6H9L7 571 aa17.28■□□□□ 0.36
PDLIM5-212ENST00000509333 TANGO2Q6ICL3 276 aa17.28■□□□□ 0.36
PDLIM5-212ENST00000509333 INTS8Q75QN2 995 aaKnown RBP17.28■□□□□ 0.36
PDLIM5-212ENST00000509333 FBXL6Q8N531 539 aa17.28■□□□□ 0.36
PDLIM5-212ENST00000509333 SHKBP1Q8TBC3 707 aa17.28■□□□□ 0.36
PDLIM5-212ENST00000509333 SYAP1Q96A49 352 aaPredicted RBP17.28■□□□□ 0.36
PDLIM5-212ENST00000509333 PI4K2AQ9BTU6 479 aa17.28■□□□□ 0.36
PDLIM5-212ENST00000509333 GTPBP4Q9BZE4 634 aaKnown RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms