RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 TEAD2Q15562 447 aa11.78□□□□□ -0.52
RNF4-212ENST00000509258 WSCD1Q658N2 575 aa11.78□□□□□ -0.52
RNF4-212ENST00000509258 LMBRD2Q68DH5 695 aaPredicted RBP11.78□□□□□ -0.52
RNF4-212ENST00000509258 SLFN12LQ6IEE8 588 aa11.78□□□□□ -0.52
RNF4-212ENST00000509258 C1orf228Q6PIY5 440 aa11.78□□□□□ -0.52
RNF4-212ENST00000509258 MAMSTRQ6ZN01 415 aa11.78□□□□□ -0.52
RNF4-212ENST00000509258 OSTM1Q86WC4 334 aa11.78□□□□□ -0.52
RNF4-212ENST00000509258 CD302Q8IX05 232 aa11.78□□□□□ -0.52
RNF4-212ENST00000509258 GRAMD1CQ8IYS0 662 aa11.78□□□□□ -0.52
RNF4-212ENST00000509258 ZNF687Q8N1G0 1237 aa11.78□□□□□ -0.52
RNF4-212ENST00000509258 C1orf127Q8N9H9 656 aa11.78□□□□□ -0.52
RNF4-212ENST00000509258 SHKBP1Q8TBC3 707 aa11.78□□□□□ -0.52
RNF4-212ENST00000509258 ZSCAN18Q8TBC5 510 aaPredicted RBP11.78□□□□□ -0.52
RNF4-212ENST00000509258 FAM3CQ92520 227 aa11.78□□□□□ -0.52
RNF4-212ENST00000509258 MSANTD3Q96H12 275 aa11.78□□□□□ -0.52
RNF4-212ENST00000509258 ACCSQ96QU6 501 aa11.78□□□□□ -0.52
RNF4-212ENST00000509258 MKNK1Q9BUB5 465 aa11.78□□□□□ -0.52
RNF4-212ENST00000509258 TRIM9Q9C026 710 aa11.78□□□□□ -0.52
RNF4-212ENST00000509258 SLITRK6Q9H5Y7 841 aa11.78□□□□□ -0.52
RNF4-212ENST00000509258 ASB7Q9H672 318 aa11.78□□□□□ -0.52
RNF4-212ENST00000509258 PDE11AQ9HCR9 933 aa11.78□□□□□ -0.52
RNF4-212ENST00000509258 TMLHEQ9NVH6 421 aa11.78□□□□□ -0.52
RNF4-212ENST00000509258 SIX4Q9UIU6 781 aa11.78□□□□□ -0.52
RNF4-212ENST00000509258 GMEB2Q9UKD1 530 aa11.78□□□□□ -0.52
RNF4-212ENST00000509258 PCDHA7Q9UN72 937 aa11.78□□□□□ -0.52
RNF4-212ENST00000509258 ZDHHC9Q9Y397 364 aa11.78□□□□□ -0.52
RNF4-212ENST00000509258 C2CD2Q9Y426 696 aa11.78□□□□□ -0.52
RNF4-212ENST00000509258 GTF3C3Q9Y5Q9 886 aa11.78□□□□□ -0.52
RNF4-212ENST00000509258 MYH10P35580 1976 aa11.78□□□□□ -0.52
RNF4-212ENST00000509258 EPG5Q9HCE0 2579 aa11.77□□□□□ -0.52
RNF4-212ENST00000509258 SPTBN2O15020 2390 aa11.77□□□□□ -0.52
RNF4-212ENST00000509258 OR6C75A6NL08 312 aa11.77□□□□□ -0.53
RNF4-212ENST00000509258 PRR5-ARHGAP8B1AHC4 643 aa11.77□□□□□ -0.53
RNF4-212ENST00000509258 CYB561D2O14569 222 aa11.77□□□□□ -0.53
RNF4-212ENST00000509258 ZNF263O14978 683 aa11.77□□□□□ -0.53
RNF4-212ENST00000509258 CUTAO60888 179 aa11.77□□□□□ -0.53
RNF4-212ENST00000509258 YEATS4O95619 227 aa11.77□□□□□ -0.53
RNF4-212ENST00000509258 ATF6P18850 670 aa11.77□□□□□ -0.53
RNF4-212ENST00000509258 POLR2BP30876 1174 aaKnown RBP11.77□□□□□ -0.53
RNF4-212ENST00000509258 VIPR2P41587 438 aa11.77□□□□□ -0.53
RNF4-212ENST00000509258 ALDH1A3P47895 512 aa11.77□□□□□ -0.53
RNF4-212ENST00000509258 ARHGAP8P85298 464 aa11.77□□□□□ -0.53
RNF4-212ENST00000509258 DNM1Q05193 864 aaKnown RBP11.77□□□□□ -0.53
RNF4-212ENST00000509258 EHHADHQ08426 723 aa11.77□□□□□ -0.53
RNF4-212ENST00000509258 EPM2AIP1Q7L775 607 aaPredicted RBP11.77□□□□□ -0.53
RNF4-212ENST00000509258 HSCBQ8IWL3 235 aa11.77□□□□□ -0.53
RNF4-212ENST00000509258 YAF2Q8IY57 180 aa11.77□□□□□ -0.53
RNF4-212ENST00000509258 OR5B17Q8NGF7 314 aa11.77□□□□□ -0.53
RNF4-212ENST00000509258 LRRC3BQ96PB8 259 aa11.77□□□□□ -0.53
RNF4-212ENST00000509258 LPIN3Q9BQK8 851 aa11.77□□□□□ -0.53
RNF4-212ENST00000509258 PYM1Q9BRP8 204 aaKnown RBP11.77□□□□□ -0.53
RNF4-212ENST00000509258 ZCWPW1Q9H0M4 648 aa11.77□□□□□ -0.53
RNF4-212ENST00000509258 GZF1Q9H116 711 aaPredicted RBP11.77□□□□□ -0.53
RNF4-212ENST00000509258 BLZF1Q9H2G9 400 aa11.77□□□□□ -0.53
RNF4-212ENST00000509258 CDV3Q9UKY7 258 aaKnown RBP11.77□□□□□ -0.53
RNF4-212ENST00000509258 RAB23Q9ULC3 237 aa11.77□□□□□ -0.53
RNF4-212ENST00000509258 TPRP12270 2363 aaKnown RBP11.76□□□□□ -0.53
RNF4-212ENST00000509258 MYOFQ9NZM1 2061 aa11.76□□□□□ -0.53
RNF4-212ENST00000509258 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.76□□□□□ -0.53
RNF4-212ENST00000509258 A0A1W2PRU2 124 aa11.76□□□□□ -0.53
RNF4-212ENST00000509258 ARNTLO00327 626 aa11.76□□□□□ -0.53
RNF4-212ENST00000509258 POLR2DO15514 142 aaKnown RBP11.76□□□□□ -0.53
RNF4-212ENST00000509258 TGFB1I1O43294 461 aa11.76□□□□□ -0.53
RNF4-212ENST00000509258 FGF19O95750 216 aa11.76□□□□□ -0.53
RNF4-212ENST00000509258 ITGB3P05106 788 aa11.76□□□□□ -0.53
RNF4-212ENST00000509258 ODC1P11926 461 aa11.76□□□□□ -0.53
RNF4-212ENST00000509258 TDGF1P13385 188 aa11.76□□□□□ -0.53
RNF4-212ENST00000509258 GARTP22102 1010 aa11.76□□□□□ -0.53
RNF4-212ENST00000509258 GPR15P49685 360 aa11.76□□□□□ -0.53
RNF4-212ENST00000509258 TAF6P49848 677 aa11.76□□□□□ -0.53
RNF4-212ENST00000509258 EPHB3P54753 998 aa11.76□□□□□ -0.53
RNF4-212ENST00000509258 MLLT6P55198 1093 aaPredicted RBP11.76□□□□□ -0.53
RNF4-212ENST00000509258 TFAMQ00059 246 aaKnown RBP11.76□□□□□ -0.53
RNF4-212ENST00000509258 CUL4BQ13620 913 aa11.76□□□□□ -0.53
RNF4-212ENST00000509258 MYBPC2Q14324 1141 aa11.76□□□□□ -0.53
RNF4-212ENST00000509258 SLC39A12Q504Y0 691 aa11.76□□□□□ -0.53
RNF4-212ENST00000509258 ARMCX5Q6P1M9 558 aa11.76□□□□□ -0.53
RNF4-212ENST00000509258 GAREM2Q75VX8 874 aa11.76□□□□□ -0.53
RNF4-212ENST00000509258 CBWD2Q8IUF1 395 aa11.76□□□□□ -0.53
RNF4-212ENST00000509258 MFSD6LQ8IWD5 586 aa11.76□□□□□ -0.53
RNF4-212ENST00000509258 CSGALNACT1Q8TDX6 532 aa11.76□□□□□ -0.53
RNF4-212ENST00000509258 NOC3LQ8WTT2 800 aaKnown RBP11.76□□□□□ -0.53
RNF4-212ENST00000509258 ZNF396Q96N95 335 aaPredicted RBP11.76□□□□□ -0.53
RNF4-212ENST00000509258 MTMR12Q9C0I1 747 aa11.76□□□□□ -0.53
RNF4-212ENST00000509258 TNMDQ9H2S6 317 aa11.76□□□□□ -0.53
RNF4-212ENST00000509258 RBAKQ9NYW8 714 aaPredicted RBP11.76□□□□□ -0.53
RNF4-212ENST00000509258 USP18Q9UMW8 372 aa11.76□□□□□ -0.53
RNF4-212ENST00000509258 L1RE1Q9UN81 338 aa11.76□□□□□ -0.53
RNF4-212ENST00000509258 NME7Q9Y5B8 376 aa11.76□□□□□ -0.53
RNF4-212ENST00000509258 KIAA1549LQ6ZVL6 1849 aa11.75□□□□□ -0.53
RNF4-212ENST00000509258 ACACBO00763 2458 aa11.75□□□□□ -0.53
RNF4-212ENST00000509258 HEPACAM2A8MVW5 462 aa11.75□□□□□ -0.53
RNF4-212ENST00000509258 TULP1O00294 542 aaPredicted RBP11.75□□□□□ -0.53
RNF4-212ENST00000509258 EXTL3O43909 919 aa11.75□□□□□ -0.53
RNF4-212ENST00000509258 IL18RAPO95256 599 aa11.75□□□□□ -0.53
RNF4-212ENST00000509258 ACAT1P24752 427 aaKnown RBP11.75□□□□□ -0.53
RNF4-212ENST00000509258 ASIC1P78348 528 aa11.75□□□□□ -0.53
RNF4-212ENST00000509258 FCHO2Q0JRZ9 810 aa11.75□□□□□ -0.53
RNF4-212ENST00000509258 LRRC32Q14392 662 aa11.75□□□□□ -0.53
RNF4-212ENST00000509258 POSTNQ15063 836 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms