RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 MANSC1Q9H8J5 431 aa10.53□□□□□ -0.72
PDGFRA-207ENST00000509092 TMOD2Q9NZR1 351 aa10.53□□□□□ -0.72
PDGFRA-207ENST00000509092 AJAP1Q9UKB5 411 aaPredicted RBP10.53□□□□□ -0.72
PDGFRA-207ENST00000509092 HEMK1Q9Y5R4 338 aaPredicted RBP10.53□□□□□ -0.72
PDGFRA-207ENST00000509092 ANKRD62A6NC57 917 aa10.52□□□□□ -0.73
PDGFRA-207ENST00000509092 ATF2P15336 505 aa10.52□□□□□ -0.73
PDGFRA-207ENST00000509092 STAT1P42224 750 aa10.52□□□□□ -0.73
PDGFRA-207ENST00000509092 TECP42680 631 aa10.52□□□□□ -0.73
PDGFRA-207ENST00000509092 MECOMQ03112 1051 aa10.52□□□□□ -0.73
PDGFRA-207ENST00000509092 GRAMD1BQ3KR37 738 aa10.52□□□□□ -0.73
PDGFRA-207ENST00000509092 ARL13BQ3SXY8 428 aa10.52□□□□□ -0.73
PDGFRA-207ENST00000509092 METTL24Q5JXM2 366 aa10.52□□□□□ -0.73
PDGFRA-207ENST00000509092 CENPUQ71F23 418 aa10.52□□□□□ -0.73
PDGFRA-207ENST00000509092 GLYCTKQ8IVS8 523 aa10.52□□□□□ -0.73
PDGFRA-207ENST00000509092 CENPSQ8N2Z9 138 aa10.52□□□□□ -0.73
PDGFRA-207ENST00000509092 RAD54LQ92698 747 aa10.52□□□□□ -0.73
PDGFRA-207ENST00000509092 C9orf72Q96LT7 481 aa10.52□□□□□ -0.73
PDGFRA-207ENST00000509092 PRPF18Q99633 342 aaKnown RBP10.52□□□□□ -0.73
PDGFRA-207ENST00000509092 THAP2Q9H0W7 228 aa10.52□□□□□ -0.73
PDGFRA-207ENST00000509092 WNT8AQ9H1J5 351 aa10.52□□□□□ -0.73
PDGFRA-207ENST00000509092 ZNF287Q9HBT7 754 aa10.52□□□□□ -0.73
PDGFRA-207ENST00000509092 SIX2Q9NPC8 291 aa10.52□□□□□ -0.73
PDGFRA-207ENST00000509092 ITM2BQ9Y287 266 aa10.52□□□□□ -0.73
PDGFRA-207ENST00000509092 GSTTP1A0A1W2PQM5 241 aa10.52□□□□□ -0.73
PDGFRA-207ENST00000509092 KLRF2D3W0D1 207 aa10.52□□□□□ -0.73
PDGFRA-207ENST00000509092 KDM1AO60341 852 aa10.52□□□□□ -0.73
PDGFRA-207ENST00000509092 ADAMTS2O95450 1211 aa10.52□□□□□ -0.73
PDGFRA-207ENST00000509092 RBP3P10745 1247 aa10.52□□□□□ -0.73
PDGFRA-207ENST00000509092 ADRA1DP25100 572 aa10.52□□□□□ -0.73
PDGFRA-207ENST00000509092 GNA11P29992 359 aa10.52□□□□□ -0.73
PDGFRA-207ENST00000509092 HMOX2P30519 316 aa10.52□□□□□ -0.73
PDGFRA-207ENST00000509092 MAN1A1P33908 653 aa10.52□□□□□ -0.73
PDGFRA-207ENST00000509092 NSUN2Q08J23 767 aaKnown RBP eCLIP10.52□□□□□ -0.73
PDGFRA-207ENST00000509092 HIC1Q14526 733 aa10.52□□□□□ -0.73
PDGFRA-207ENST00000509092 ACAP1Q15027 740 aa10.52□□□□□ -0.73
PDGFRA-207ENST00000509092 CYTH1Q15438 398 aa10.52□□□□□ -0.73
PDGFRA-207ENST00000509092 FAM26FQ5R3K3 315 aa10.52□□□□□ -0.73
PDGFRA-207ENST00000509092 SPOPLQ6IQ16 392 aa10.52□□□□□ -0.73
PDGFRA-207ENST00000509092 DCLRE1AQ6PJP8 1040 aa10.52□□□□□ -0.73
PDGFRA-207ENST00000509092 LPCAT2Q7L5N7 544 aa10.52□□□□□ -0.73
PDGFRA-207ENST00000509092 SLC26A7Q8TE54 656 aa10.52□□□□□ -0.73
PDGFRA-207ENST00000509092 MORC4Q8TE76 937 aa10.52□□□□□ -0.73
PDGFRA-207ENST00000509092 CHPT1Q8WUD6 406 aa10.52□□□□□ -0.73
PDGFRA-207ENST00000509092 DCUN1D1Q96GG9 259 aa10.52□□□□□ -0.73
PDGFRA-207ENST00000509092 PNMA5Q96PV4 448 aa10.52□□□□□ -0.73
PDGFRA-207ENST00000509092 RBM15Q96T37 977 aaKnown RBP eCLIP10.52□□□□□ -0.73
PDGFRA-207ENST00000509092 HAUS8Q9BT25 410 aa10.52□□□□□ -0.73
PDGFRA-207ENST00000509092 UNKQ9C0B0 810 aaKnown RBP10.52□□□□□ -0.73
PDGFRA-207ENST00000509092 VPS11Q9H270 941 aa10.52□□□□□ -0.73
PDGFRA-207ENST00000509092 QPCTLQ9NXS2 382 aa10.52□□□□□ -0.73
PDGFRA-207ENST00000509092 POLIQ9UNA4 740 aa10.52□□□□□ -0.73
PDGFRA-207ENST00000509092 SNX9Q9Y5X1 595 aa10.52□□□□□ -0.73
PDGFRA-207ENST00000509092 MAD1L1Q9Y6D9 718 aa10.52□□□□□ -0.73
PDGFRA-207ENST00000509092 COL14A1Q05707 1796 aaKnown RBP10.51□□□□□ -0.73
PDGFRA-207ENST00000509092 CAPN8A6NHC0 703 aa10.51□□□□□ -0.73
PDGFRA-207ENST00000509092 K7EPI3 171 aa10.51□□□□□ -0.73
PDGFRA-207ENST00000509092 PIK3CDO00329 1044 aa10.51□□□□□ -0.73
PDGFRA-207ENST00000509092 CCNT2O60583 730 aaKnown RBP10.51□□□□□ -0.73
PDGFRA-207ENST00000509092 PDE8AO60658 829 aa10.51□□□□□ -0.73
PDGFRA-207ENST00000509092 FAM58BPP0C7Q3 252 aa10.51□□□□□ -0.73
PDGFRA-207ENST00000509092 MYL2P10916 166 aa10.51□□□□□ -0.73
PDGFRA-207ENST00000509092 HSPA8P11142 646 aaKnown RBP10.51□□□□□ -0.73
PDGFRA-207ENST00000509092 PABPC1P11940 636 aaKnown RBP10.51□□□□□ -0.73
PDGFRA-207ENST00000509092 CCNIQ14094 377 aa10.51□□□□□ -0.73
PDGFRA-207ENST00000509092 TCEAL1Q15170 157 aa10.51□□□□□ -0.73
PDGFRA-207ENST00000509092 EPHA7Q15375 998 aa10.51□□□□□ -0.73
PDGFRA-207ENST00000509092 TBCCQ15814 346 aa10.51□□□□□ -0.73
PDGFRA-207ENST00000509092 SEPT7Q16181 437 aaKnown RBP10.51□□□□□ -0.73
PDGFRA-207ENST00000509092 FRMD5Q7Z6J6 570 aa10.51□□□□□ -0.73
PDGFRA-207ENST00000509092 DGKHQ86XP1 1220 aa10.51□□□□□ -0.73
PDGFRA-207ENST00000509092 WDR75Q8IWA0 830 aaKnown RBP10.51□□□□□ -0.73
PDGFRA-207ENST00000509092 BBOF1Q8ND07 529 aa10.51□□□□□ -0.73
PDGFRA-207ENST00000509092 LSM14AQ8ND56 463 aaKnown RBP10.51□□□□□ -0.73
PDGFRA-207ENST00000509092 GPKOWQ92917 476 aaPredicted RBP eCLIP10.51□□□□□ -0.73
PDGFRA-207ENST00000509092 PWWP2AQ96N64 755 aa10.51□□□□□ -0.73
PDGFRA-207ENST00000509092 SLC52A2Q9HAB3 445 aa10.51□□□□□ -0.73
PDGFRA-207ENST00000509092 PPCSQ9HAB8 311 aa10.51□□□□□ -0.73
PDGFRA-207ENST00000509092 IGSF9Q9P2J2 1179 aa10.51□□□□□ -0.73
PDGFRA-207ENST00000509092 APPL1Q9UKG1 709 aa10.51□□□□□ -0.73
PDGFRA-207ENST00000509092 WDR91A4D1P6 747 aa10.5□□□□□ -0.73
PDGFRA-207ENST00000509092 MINDY4BA8MYZ0 360 aa10.5□□□□□ -0.73
PDGFRA-207ENST00000509092 POC1B-GALNT4F8VUJ3 575 aa10.5□□□□□ -0.73
PDGFRA-207ENST00000509092 TM9SF1O15321 606 aa10.5□□□□□ -0.73
PDGFRA-207ENST00000509092 CYP26A1O43174 497 aa10.5□□□□□ -0.73
PDGFRA-207ENST00000509092 CRTAMO95727 393 aa10.5□□□□□ -0.73
PDGFRA-207ENST00000509092 IL1BP01584 269 aa10.5□□□□□ -0.73
PDGFRA-207ENST00000509092 C6orf222P0C671 652 aaPredicted RBP10.5□□□□□ -0.73
PDGFRA-207ENST00000509092 SRGAP2CP0DJJ0 459 aa10.5□□□□□ -0.73
PDGFRA-207ENST00000509092 SRGAP2BP0DMP2 458 aa10.5□□□□□ -0.73
PDGFRA-207ENST00000509092 THRAP10827 490 aa10.5□□□□□ -0.73
PDGFRA-207ENST00000509092 VDRP11473 427 aa10.5□□□□□ -0.73
PDGFRA-207ENST00000509092 ZNF23P17027 643 aa10.5□□□□□ -0.73
PDGFRA-207ENST00000509092 MAGEA4P43358 317 aa10.5□□□□□ -0.73
PDGFRA-207ENST00000509092 ZNF200P98182 395 aaPredicted RBP10.5□□□□□ -0.73
PDGFRA-207ENST00000509092 DMPKQ09013 629 aa10.5□□□□□ -0.73
PDGFRA-207ENST00000509092 EDRF1Q3B7T1 1238 aa10.5□□□□□ -0.73
PDGFRA-207ENST00000509092 ZNF829Q3KNS6 432 aaPredicted RBP10.5□□□□□ -0.73
PDGFRA-207ENST00000509092 ZNF280DQ6N043 979 aa10.5□□□□□ -0.73
PDGFRA-207ENST00000509092 NOP9Q86U38 636 aaKnown RBP10.5□□□□□ -0.73
PDGFRA-207ENST00000509092 ALYREFQ86V81 257 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms