RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 MRPL45Q9BRJ2 306 aaKnown RBP11.06□□□□□ -0.64
RFC1-211ENST00000509084 MFRPQ9BY79 579 aa11.06□□□□□ -0.64
RFC1-211ENST00000509084 OXCT2Q9BYC2 517 aaPredicted RBP11.06□□□□□ -0.64
RFC1-211ENST00000509084 CWH43Q9H720 699 aa11.06□□□□□ -0.64
RFC1-211ENST00000509084 PCDH10Q9P2E7 1040 aa11.06□□□□□ -0.64
RFC1-211ENST00000509084 CACNG4Q9UBN1 327 aa11.06□□□□□ -0.64
RFC1-211ENST00000509084 NOCTQ9UK39 431 aaKnown RBP11.06□□□□□ -0.64
RFC1-211ENST00000509084 RWDD3Q9Y3V2 267 aa11.06□□□□□ -0.64
RFC1-211ENST00000509084 CEP83Q9Y592 693 aa11.06□□□□□ -0.64
RFC1-211ENST00000509084 EPN1Q9Y6I3 576 aaPredicted RBP11.06□□□□□ -0.64
RFC1-211ENST00000509084 PTPRSQ13332 1948 aa11.05□□□□□ -0.64
RFC1-211ENST00000509084 TSC2P49815 1807 aa11.05□□□□□ -0.64
RFC1-211ENST00000509084 THAP12O43422 761 aa11.05□□□□□ -0.64
RFC1-211ENST00000509084 LCA5LO95447 670 aa11.05□□□□□ -0.64
RFC1-211ENST00000509084 PLEKP08567 350 aaPredicted RBP11.05□□□□□ -0.64
RFC1-211ENST00000509084 CCDC175P0C221 793 aa11.05□□□□□ -0.64
RFC1-211ENST00000509084 CD19P15391 556 aa11.05□□□□□ -0.64
RFC1-211ENST00000509084 MAGEA10P43363 369 aaPredicted RBP11.05□□□□□ -0.64
RFC1-211ENST00000509084 BRCC3P46736 316 aa11.05□□□□□ -0.64
RFC1-211ENST00000509084 RAD23BP54727 409 aa11.05□□□□□ -0.64
RFC1-211ENST00000509084 YWHAHQ04917 246 aaPredicted RBP11.05□□□□□ -0.64
RFC1-211ENST00000509084 ASTE1Q2TB18 679 aaPredicted RBP11.05□□□□□ -0.64
RFC1-211ENST00000509084 ZNF394Q53GI3 561 aa11.05□□□□□ -0.64
RFC1-211ENST00000509084 SGO2Q562F6 1265 aa11.05□□□□□ -0.64
RFC1-211ENST00000509084 WSCD1Q658N2 575 aa11.05□□□□□ -0.64
RFC1-211ENST00000509084 FAM117BQ6P1L5 589 aa11.05□□□□□ -0.64
RFC1-211ENST00000509084 FUT10Q6P4F1 479 aa11.05□□□□□ -0.64
RFC1-211ENST00000509084 KCNT2Q6UVM3 1135 aa11.05□□□□□ -0.64
RFC1-211ENST00000509084 CD300LGQ6UXG3 332 aa11.05□□□□□ -0.64
RFC1-211ENST00000509084 RAD9BQ6WBX8 426 aa11.05□□□□□ -0.64
RFC1-211ENST00000509084 ZNF571Q7Z3V5 609 aaPredicted RBP11.05□□□□□ -0.64
RFC1-211ENST00000509084 NOP9Q86U38 636 aaKnown RBP11.05□□□□□ -0.64
RFC1-211ENST00000509084 SLC47A2Q86VL8 602 aa11.05□□□□□ -0.64
RFC1-211ENST00000509084 CRYBG2Q8N1P7 616 aa11.05□□□□□ -0.64
RFC1-211ENST00000509084 SLC4A11Q8NBS3 891 aa11.05□□□□□ -0.64
RFC1-211ENST00000509084 FBXO22Q8NEZ5 403 aa11.05□□□□□ -0.64
RFC1-211ENST00000509084 WHAMMQ8TF30 809 aa11.05□□□□□ -0.64
RFC1-211ENST00000509084 HASPINQ8TF76 798 aa11.05□□□□□ -0.64
RFC1-211ENST00000509084 RNPC3Q96LT9 517 aaKnown RBP11.05□□□□□ -0.64
RFC1-211ENST00000509084 SYT11Q9BT88 431 aa11.05□□□□□ -0.64
RFC1-211ENST00000509084 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.05□□□□□ -0.64
RFC1-211ENST00000509084 PDCL3Q9H2J4 239 aa11.05□□□□□ -0.64
RFC1-211ENST00000509084 MARCH5Q9NX47 278 aa11.05□□□□□ -0.64
RFC1-211ENST00000509084 CXXC1Q9P0U4 656 aaPredicted RBP11.05□□□□□ -0.64
RFC1-211ENST00000509084 PUF60Q9UHX1 559 aaKnown RBP11.05□□□□□ -0.64
RFC1-211ENST00000509084 CDH9Q9ULB4 789 aa11.05□□□□□ -0.64
RFC1-211ENST00000509084 STXBP5LQ9Y2K9 1186 aa11.05□□□□□ -0.64
RFC1-211ENST00000509084 PCDHB12Q9Y5F1 795 aa11.05□□□□□ -0.64
RFC1-211ENST00000509084 GOLGA6L9A6NEM1 432 aa11.04□□□□□ -0.64
RFC1-211ENST00000509084 H7C4K7 107 aa11.04□□□□□ -0.64
RFC1-211ENST00000509084 ZSCAN12O43309 604 aa11.04□□□□□ -0.64
RFC1-211ENST00000509084 TLL1O43897 1013 aa11.04□□□□□ -0.64
RFC1-211ENST00000509084 LSM8O95777 96 aaKnown RBP11.04□□□□□ -0.64
RFC1-211ENST00000509084 ITGB1P05556 798 aa11.04□□□□□ -0.64
RFC1-211ENST00000509084 MSNP26038 577 aaKnown RBP11.04□□□□□ -0.64
RFC1-211ENST00000509084 TSPY1Q01534 308 aa11.04□□□□□ -0.64
RFC1-211ENST00000509084 MAPRE1Q15691 268 aaKnown RBP11.04□□□□□ -0.64
RFC1-211ENST00000509084 ARHGAP17Q68EM7 881 aa11.04□□□□□ -0.64
RFC1-211ENST00000509084 OVOS1Q6IE37 1185 aa11.04□□□□□ -0.64
RFC1-211ENST00000509084 ZNF280DQ6N043 979 aa11.04□□□□□ -0.64
RFC1-211ENST00000509084 SLC39A11Q8N1S5 342 aa11.04□□□□□ -0.64
RFC1-211ENST00000509084 COLGALT1Q8NBJ5 622 aa11.04□□□□□ -0.64
RFC1-211ENST00000509084 ZNF606Q8WXB4 792 aa11.04□□□□□ -0.64
RFC1-211ENST00000509084 DDX1Q92499 740 aaKnown RBP11.04□□□□□ -0.64
RFC1-211ENST00000509084 RABGGTAQ92696 567 aa11.04□□□□□ -0.64
RFC1-211ENST00000509084 TMEM169Q96HH4 297 aa11.04□□□□□ -0.64
RFC1-211ENST00000509084 IGSF21Q96ID5 467 aa11.04□□□□□ -0.64
RFC1-211ENST00000509084 SYT15Q9BQS2 421 aa11.04□□□□□ -0.64
RFC1-211ENST00000509084 ACBD6Q9BR61 282 aa11.04□□□□□ -0.64
RFC1-211ENST00000509084 ZNF518BQ9C0D4 1074 aa11.04□□□□□ -0.64
RFC1-211ENST00000509084 ELOVL4Q9GZR5 314 aa11.04□□□□□ -0.64
RFC1-211ENST00000509084 SEPT11Q9NVA2 429 aaKnown RBP11.04□□□□□ -0.64
RFC1-211ENST00000509084 DDX43Q9NXZ2 648 aaKnown RBP11.04□□□□□ -0.64
RFC1-211ENST00000509084 SPG21Q9NZD8 308 aa11.04□□□□□ -0.64
RFC1-211ENST00000509084 ADAMTS1Q9UHI8 967 aa11.04□□□□□ -0.64
RFC1-211ENST00000509084 PCDHGC3Q9UN70 934 aa11.04□□□□□ -0.64
RFC1-211ENST00000509084 MRPL42Q9Y6G3 142 aaKnown RBP11.04□□□□□ -0.64
RFC1-211ENST00000509084 OR6C75A6NL08 312 aa11.03□□□□□ -0.64
RFC1-211ENST00000509084 DDX3XO00571 662 aaKnown RBP eCLIP11.03□□□□□ -0.64
RFC1-211ENST00000509084 SNPHO15079 494 aa11.03□□□□□ -0.64
RFC1-211ENST00000509084 MMEP08473 750 aa11.03□□□□□ -0.64
RFC1-211ENST00000509084 GZMAP12544 262 aa11.03□□□□□ -0.64
RFC1-211ENST00000509084 FGFR3P22607 806 aa11.03□□□□□ -0.64
RFC1-211ENST00000509084 FMO1Q01740 532 aa11.03□□□□□ -0.64
RFC1-211ENST00000509084 USP41Q3LFD5 358 aa11.03□□□□□ -0.64
RFC1-211ENST00000509084 TAF3Q5VWG9 929 aa11.03□□□□□ -0.64
RFC1-211ENST00000509084 ALKBH5Q6P6C2 394 aaKnown RBP11.03□□□□□ -0.64
RFC1-211ENST00000509084 ANKS3Q6ZW76 656 aa11.03□□□□□ -0.64
RFC1-211ENST00000509084 TMCO2Q7Z6W1 182 aaPredicted RBP11.03□□□□□ -0.64
RFC1-211ENST00000509084 ACOT1Q86TX2 421 aa11.03□□□□□ -0.64
RFC1-211ENST00000509084 ZSCAN30Q86W11 494 aa11.03□□□□□ -0.64
RFC1-211ENST00000509084 OSTM1Q86WC4 334 aa11.03□□□□□ -0.64
RFC1-211ENST00000509084 GPIHBP1Q8IV16 184 aa11.03□□□□□ -0.64
RFC1-211ENST00000509084 GLYCTKQ8IVS8 523 aa11.03□□□□□ -0.64
RFC1-211ENST00000509084 GPR65Q8IYL9 337 aa11.03□□□□□ -0.64
RFC1-211ENST00000509084 RNF168Q8IYW5 571 aaPredicted RBP11.03□□□□□ -0.64
RFC1-211ENST00000509084 B3GALNT2Q8NCR0 500 aa11.03□□□□□ -0.64
RFC1-211ENST00000509084 MSANTD4Q8NCY6 345 aa11.03□□□□□ -0.64
RFC1-211ENST00000509084 SLC20A1Q8WUM9 679 aa11.03□□□□□ -0.64
RFC1-211ENST00000509084 CLP1Q92989 425 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms