RNA–Protein interactions for RNA: ENST00000508717.1

TRIO-212, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 859 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-212ENST00000508717 KCNC3Q14003 757 aa14.05□□□□□ -0.16
TRIO-212ENST00000508717 INTS6LQ5JSJ4 861 aaKnown RBP14.05□□□□□ -0.16
TRIO-212ENST00000508717 LILRA6Q6PI73 481 aa14.05□□□□□ -0.16
TRIO-212ENST00000508717 PRSS55Q6UWB4 352 aaPredicted RBP14.05□□□□□ -0.16
TRIO-212ENST00000508717 RRAGAQ7L523 313 aa14.05□□□□□ -0.16
TRIO-212ENST00000508717 PPFIBP1Q86W92 1011 aa14.05□□□□□ -0.16
TRIO-212ENST00000508717 OR10T2Q8NGX3 314 aa14.05□□□□□ -0.16
TRIO-212ENST00000508717 C2orf15Q8WU43 125 aaKnown RBP14.05□□□□□ -0.16
TRIO-212ENST00000508717 MRFAP1L1Q96HT8 127 aa14.05□□□□□ -0.16
TRIO-212ENST00000508717 NUP58Q9BVL2 599 aa14.05□□□□□ -0.16
TRIO-212ENST00000508717 LSM14BQ9BX40 385 aaKnown RBP14.05□□□□□ -0.16
TRIO-212ENST00000508717 NT5C1AQ9BXI3 368 aa14.05□□□□□ -0.16
TRIO-212ENST00000508717 STK33Q9BYT3 514 aa14.05□□□□□ -0.16
TRIO-212ENST00000508717 DNAI2Q9GZS0 605 aa14.05□□□□□ -0.16
TRIO-212ENST00000508717 SNX25Q9H3E2 840 aa14.05□□□□□ -0.16
TRIO-212ENST00000508717 NSUN3Q9H649 340 aaKnown RBP14.05□□□□□ -0.16
TRIO-212ENST00000508717 CEP72Q9P209 647 aa14.05□□□□□ -0.16
TRIO-212ENST00000508717 DNAJC12Q9UKB3 198 aa14.05□□□□□ -0.16
TRIO-212ENST00000508717 KIAA1257Q9ULG3 409 aa14.05□□□□□ -0.16
TRIO-212ENST00000508717 MYO6Q9UM54 1294 aa14.05□□□□□ -0.16
TRIO-212ENST00000508717 MTCH2Q9Y6C9 303 aa14.05□□□□□ -0.16
TRIO-212ENST00000508717 COL4A4P53420 1690 aaPredicted RBP14.04□□□□□ -0.16
TRIO-212ENST00000508717 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.04□□□□□ -0.16
TRIO-212ENST00000508717 A0A1W2PQJ5 194 aa14.04□□□□□ -0.16
TRIO-212ENST00000508717 A8MXQ7 604 aa14.04□□□□□ -0.16
TRIO-212ENST00000508717 PAPLNO95428 1278 aa14.04□□□□□ -0.16
TRIO-212ENST00000508717 PAEPP09466 180 aa14.04□□□□□ -0.16
TRIO-212ENST00000508717 RAP1GAPP47736 663 aa14.04□□□□□ -0.16
TRIO-212ENST00000508717 KLK7P49862 253 aa14.04□□□□□ -0.16
TRIO-212ENST00000508717 NDST1P52848 882 aa14.04□□□□□ -0.16
TRIO-212ENST00000508717 JAM2P57087 298 aa14.04□□□□□ -0.16
TRIO-212ENST00000508717 ROR1Q01973 937 aa14.04□□□□□ -0.16
TRIO-212ENST00000508717 APBA1Q02410 837 aa14.04□□□□□ -0.16
TRIO-212ENST00000508717 ADGRE1Q14246 886 aa14.04□□□□□ -0.16
TRIO-212ENST00000508717 COL19A1Q14993 1142 aa14.04□□□□□ -0.16
TRIO-212ENST00000508717 MAPRE1Q15691 268 aaKnown RBP14.04□□□□□ -0.16
TRIO-212ENST00000508717 NFE2Q16621 373 aaPredicted RBP14.04□□□□□ -0.16
TRIO-212ENST00000508717 PLPP4Q5VZY2 271 aa14.04□□□□□ -0.16
TRIO-212ENST00000508717 IQCEQ6IPM2 695 aa14.04□□□□□ -0.16
TRIO-212ENST00000508717 GJB7Q6PEY0 223 aa14.04□□□□□ -0.16
TRIO-212ENST00000508717 TMEM184AQ6ZMB5 413 aa14.04□□□□□ -0.16
TRIO-212ENST00000508717 SCARA5Q6ZMJ2 495 aa14.04□□□□□ -0.16
TRIO-212ENST00000508717 DCP1BQ8IZD4 617 aaKnown RBP14.04□□□□□ -0.16
TRIO-212ENST00000508717 NEK11Q8NG66 645 aa14.04□□□□□ -0.16
TRIO-212ENST00000508717 OR6B3Q8NGW1 331 aa14.04□□□□□ -0.16
TRIO-212ENST00000508717 ZNF461Q8TAF7 563 aa14.04□□□□□ -0.16
TRIO-212ENST00000508717 MICAL1Q8TDZ2 1067 aa14.04□□□□□ -0.16
TRIO-212ENST00000508717 HDAC7Q8WUI4 952 aa14.04□□□□□ -0.16
TRIO-212ENST00000508717 AUTS2Q8WXX7 1259 aa14.04□□□□□ -0.16
TRIO-212ENST00000508717 KAT5Q92993 513 aa14.04□□□□□ -0.16
TRIO-212ENST00000508717 PPP2R3CQ969Q6 453 aa14.04□□□□□ -0.16
TRIO-212ENST00000508717 GPR88Q9GZN0 384 aa14.04□□□□□ -0.16
TRIO-212ENST00000508717 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.04□□□□□ -0.16
TRIO-212ENST00000508717 FAM207AQ9NSI2 230 aaPredicted RBP14.04□□□□□ -0.16
TRIO-212ENST00000508717 MTMR10Q9NXD2 777 aa14.04□□□□□ -0.16
TRIO-212ENST00000508717 FHOD1Q9Y613 1164 aa14.04□□□□□ -0.16
TRIO-212ENST00000508717 CDY1Q9Y6F8 540 aa14.04□□□□□ -0.16
TRIO-212ENST00000508717 WDR27A2RRH5 827 aa14.03□□□□□ -0.16
TRIO-212ENST00000508717 C2CD2LO14523 706 aa14.03□□□□□ -0.16
TRIO-212ENST00000508717 EPHB6O15197 1021 aa14.03□□□□□ -0.16
TRIO-212ENST00000508717 ADAM12O43184 909 aa14.03□□□□□ -0.16
TRIO-212ENST00000508717 ATF2P15336 505 aa14.03□□□□□ -0.16
TRIO-212ENST00000508717 PTPN1P18031 435 aaKnown RBP14.03□□□□□ -0.16
TRIO-212ENST00000508717 OR1D2P34982 312 aa14.03□□□□□ -0.16
TRIO-212ENST00000508717 RAD23BP54727 409 aa14.03□□□□□ -0.16
TRIO-212ENST00000508717 TSPY1Q01534 308 aa14.03□□□□□ -0.16
TRIO-212ENST00000508717 DUSP6Q16828 381 aa14.03□□□□□ -0.16
TRIO-212ENST00000508717 CFAP221Q4G0U5 840 aa14.03□□□□□ -0.16
TRIO-212ENST00000508717 LRRTM3Q86VH5 581 aa14.03□□□□□ -0.16
TRIO-212ENST00000508717 VSTM4Q8IW00 320 aa14.03□□□□□ -0.16
TRIO-212ENST00000508717 FAM71AQ8IYT1 594 aa14.03□□□□□ -0.16
TRIO-212ENST00000508717 SLC4A11Q8NBS3 891 aa14.03□□□□□ -0.16
TRIO-212ENST00000508717 B3GALNT2Q8NCR0 500 aa14.03□□□□□ -0.16
TRIO-212ENST00000508717 MYCBPAPQ8TBZ2 947 aa14.03□□□□□ -0.16
TRIO-212ENST00000508717 SLC22A17Q8WUG5 538 aa14.03□□□□□ -0.16
TRIO-212ENST00000508717 TMEM176AQ96HP8 235 aa14.03□□□□□ -0.16
TRIO-212ENST00000508717 FUBP3Q96I24 572 aaKnown RBP eCLIP14.03□□□□□ -0.16
TRIO-212ENST00000508717 TWNKQ96RR1 684 aa14.03□□□□□ -0.16
TRIO-212ENST00000508717 GAS2L1Q99501 681 aaPredicted RBP14.03□□□□□ -0.16
TRIO-212ENST00000508717 SYT15Q9BQS2 421 aa14.03□□□□□ -0.16
TRIO-212ENST00000508717 TRIM5Q9C035 493 aa14.03□□□□□ -0.16
TRIO-212ENST00000508717 ELOVL4Q9GZR5 314 aa14.03□□□□□ -0.16
TRIO-212ENST00000508717 ABCB6Q9NP58 842 aa14.03□□□□□ -0.16
TRIO-212ENST00000508717 AFF4Q9UHB7 1163 aaKnown RBP14.03□□□□□ -0.16
TRIO-212ENST00000508717 AJAP1Q9UKB5 411 aaPredicted RBP14.03□□□□□ -0.16
TRIO-212ENST00000508717 PRRC2BQ5JSZ5 2229 aaKnown RBP14.03□□□□□ -0.16
TRIO-212ENST00000508717 ATG2AQ2TAZ0 1938 aa14.02□□□□□ -0.16
TRIO-212ENST00000508717 F8VZ95 297 aa14.02□□□□□ -0.17
TRIO-212ENST00000508717 NCK2O43639 380 aa14.02□□□□□ -0.17
TRIO-212ENST00000508717 CLASP2O75122 1294 aaKnown RBP14.02□□□□□ -0.17
TRIO-212ENST00000508717 RPL17P18621 184 aaKnown RBP14.02□□□□□ -0.17
TRIO-212ENST00000508717 CD58P19256 250 aa14.02□□□□□ -0.17
TRIO-212ENST00000508717 TRIM21P19474 475 aaKnown RBP14.02□□□□□ -0.17
TRIO-212ENST00000508717 CLCN4P51793 760 aa14.02□□□□□ -0.17
TRIO-212ENST00000508717 ZNF75DP51815 510 aa14.02□□□□□ -0.17
TRIO-212ENST00000508717 POLR2FP61218 127 aaKnown RBP14.02□□□□□ -0.17
TRIO-212ENST00000508717 DRAP1Q14919 205 aaPredicted RBP14.02□□□□□ -0.17
TRIO-212ENST00000508717 MEA1Q16626 185 aa14.02□□□□□ -0.17
TRIO-212ENST00000508717 SPECC1LQ69YQ0 1117 aa14.02□□□□□ -0.17
TRIO-212ENST00000508717 TMEM270Q6UE05 265 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms