RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 SOWAHAQ2M3V2 549 aa9.78□□□□□ -0.84
NUP54-207ENST00000508583 ATAT1Q5SQI0 421 aa9.78□□□□□ -0.84
NUP54-207ENST00000508583 C1orf220Q5T0J3 134 aa9.78□□□□□ -0.84
NUP54-207ENST00000508583 LILRA6Q6PI73 481 aa9.78□□□□□ -0.84
NUP54-207ENST00000508583 C4orf50Q6ZRC1 276 aa9.78□□□□□ -0.84
NUP54-207ENST00000508583 TRIM59Q8IWR1 403 aa9.78□□□□□ -0.84
NUP54-207ENST00000508583 TCEAL8Q8IYN2 117 aa9.78□□□□□ -0.84
NUP54-207ENST00000508583 VN1R2Q8NFZ6 395 aa9.78□□□□□ -0.84
NUP54-207ENST00000508583 SPPL2BQ8TCT7 592 aa9.78□□□□□ -0.84
NUP54-207ENST00000508583 TAS1R2Q8TE23 839 aa9.78□□□□□ -0.84
NUP54-207ENST00000508583 ASB2Q96Q27 587 aa9.78□□□□□ -0.84
NUP54-207ENST00000508583 NIF3L1Q9GZT8 377 aa9.78□□□□□ -0.84
NUP54-207ENST00000508583 ZCWPW1Q9H0M4 648 aa9.78□□□□□ -0.84
NUP54-207ENST00000508583 PIDD1Q9HB75 910 aa9.78□□□□□ -0.84
NUP54-207ENST00000508583 ABCB6Q9NP58 842 aa9.78□□□□□ -0.84
NUP54-207ENST00000508583 CLEC1BQ9P126 229 aa9.78□□□□□ -0.84
NUP54-207ENST00000508583 CDH9Q9ULB4 789 aa9.78□□□□□ -0.84
NUP54-207ENST00000508583 COQ4Q9Y3A0 265 aa9.78□□□□□ -0.84
NUP54-207ENST00000508583 ATP8B3O60423 1300 aa9.78□□□□□ -0.84
NUP54-207ENST00000508583 WDR27A2RRH5 827 aa9.77□□□□□ -0.85
NUP54-207ENST00000508583 SMTNL1A8MU46 457 aa9.77□□□□□ -0.85
NUP54-207ENST00000508583 ZMYND10O75800 440 aa9.77□□□□□ -0.85
NUP54-207ENST00000508583 VNN1O95497 513 aa9.77□□□□□ -0.85
NUP54-207ENST00000508583 GNL1P36915 607 aaPredicted RBP9.77□□□□□ -0.85
NUP54-207ENST00000508583 LTBRP36941 435 aa9.77□□□□□ -0.85
NUP54-207ENST00000508583 ALDH1A3P47895 512 aa9.77□□□□□ -0.85
NUP54-207ENST00000508583 RBM10P98175 930 aaKnown RBP9.77□□□□□ -0.85
NUP54-207ENST00000508583 TFF2Q03403 129 aa9.77□□□□□ -0.85
NUP54-207ENST00000508583 ADCY1Q08828 1119 aa9.77□□□□□ -0.85
NUP54-207ENST00000508583 KCNH2Q12809 1159 aa9.77□□□□□ -0.85
NUP54-207ENST00000508583 MAN2A1Q16706 1144 aa9.77□□□□□ -0.85
NUP54-207ENST00000508583 SLC39A12Q504Y0 691 aa9.77□□□□□ -0.85
NUP54-207ENST00000508583 INTS6LQ5JSJ4 861 aaKnown RBP9.77□□□□□ -0.85
NUP54-207ENST00000508583 TJAP1Q5JTD0 557 aa9.77□□□□□ -0.85
NUP54-207ENST00000508583 SMYD5Q6GMV2 418 aa9.77□□□□□ -0.85
NUP54-207ENST00000508583 IQCEQ6IPM2 695 aa9.77□□□□□ -0.85
NUP54-207ENST00000508583 PTCRAQ6ISU1 281 aaPredicted RBP9.77□□□□□ -0.85
NUP54-207ENST00000508583 LIMS2Q7Z4I7 341 aa9.77□□□□□ -0.85
NUP54-207ENST00000508583 ITIH5Q86UX2 942 aa9.77□□□□□ -0.85
NUP54-207ENST00000508583 UNC93AQ86WB7 457 aa9.77□□□□□ -0.85
NUP54-207ENST00000508583 LEMD2Q8NC56 503 aa9.77□□□□□ -0.85
NUP54-207ENST00000508583 OR6B3Q8NGW1 331 aa9.77□□□□□ -0.85
NUP54-207ENST00000508583 SLC7A14Q8TBB6 771 aa9.77□□□□□ -0.85
NUP54-207ENST00000508583 FUBP3Q96I24 572 aaKnown RBP eCLIP9.77□□□□□ -0.85
NUP54-207ENST00000508583 NT5C1BQ96P26 610 aa9.77□□□□□ -0.85
NUP54-207ENST00000508583 BPIFA3Q9BQP9 254 aa9.77□□□□□ -0.85
NUP54-207ENST00000508583 CYP4F11Q9HBI6 524 aa9.77□□□□□ -0.85
NUP54-207ENST00000508583 PRKAG3Q9UGI9 489 aa9.77□□□□□ -0.85
NUP54-207ENST00000508583 NFE2L3Q9Y4A8 694 aa9.77□□□□□ -0.85
NUP54-207ENST00000508583 PCDHB5Q9Y5E4 795 aa9.77□□□□□ -0.85
NUP54-207ENST00000508583 SPTBN5Q9NRC6 3674 aaKnown RBP9.77□□□□□ -0.85
NUP54-207ENST00000508583 PLXNA3P51805 1871 aa9.76□□□□□ -0.85
NUP54-207ENST00000508583 CCDC195A0A1B0GUA6 201 aa9.76□□□□□ -0.85
NUP54-207ENST00000508583 GTPBP10A4D1E9 387 aaKnown RBP9.76□□□□□ -0.85
NUP54-207ENST00000508583 GRXCR2A6NFK2 248 aa9.76□□□□□ -0.85
NUP54-207ENST00000508583 BECN2A8MW95 431 aa9.76□□□□□ -0.85
NUP54-207ENST00000508583 A8MXQ7 604 aa9.76□□□□□ -0.85
NUP54-207ENST00000508583 KCNJ18B7U540 433 aa9.76□□□□□ -0.85
NUP54-207ENST00000508583 ADAM12O43184 909 aa9.76□□□□□ -0.85
NUP54-207ENST00000508583 PAPLNO95428 1278 aa9.76□□□□□ -0.85
NUP54-207ENST00000508583 EPHB3P54753 998 aa9.76□□□□□ -0.85
NUP54-207ENST00000508583 DLX2Q07687 328 aaPredicted RBP9.76□□□□□ -0.85
NUP54-207ENST00000508583 KCNJ12Q14500 433 aa9.76□□□□□ -0.85
NUP54-207ENST00000508583 CBX2Q14781 532 aaPredicted RBP9.76□□□□□ -0.85
NUP54-207ENST00000508583 VEPH1Q14D04 833 aa9.76□□□□□ -0.85
NUP54-207ENST00000508583 SMAD2Q15796 467 aaKnown RBP9.76□□□□□ -0.85
NUP54-207ENST00000508583 ANO6Q4KMQ2 910 aa9.76□□□□□ -0.85
NUP54-207ENST00000508583 CBWD6Q4V339 395 aa9.76□□□□□ -0.85
NUP54-207ENST00000508583 CBWD3Q5JTY5 395 aa9.76□□□□□ -0.85
NUP54-207ENST00000508583 CBWD5Q5RIA9 395 aa9.76□□□□□ -0.85
NUP54-207ENST00000508583 RARS2Q5T160 578 aaKnown RBP9.76□□□□□ -0.85
NUP54-207ENST00000508583 SYCE2Q6PIF2 218 aa9.76□□□□□ -0.85
NUP54-207ENST00000508583 GPR149Q86SP6 731 aa9.76□□□□□ -0.85
NUP54-207ENST00000508583 SPATA2LQ8IUW3 424 aaPredicted RBP9.76□□□□□ -0.85
NUP54-207ENST00000508583 OR10T2Q8NGX3 314 aa9.76□□□□□ -0.85
NUP54-207ENST00000508583 SMG7Q92540 1137 aaKnown RBP9.76□□□□□ -0.85
NUP54-207ENST00000508583 FAM84AQ96KN4 292 aa9.76□□□□□ -0.85
NUP54-207ENST00000508583 CEP295NLQ96MC4 621 aa9.76□□□□□ -0.85
NUP54-207ENST00000508583 SYT15Q9BQS2 421 aa9.76□□□□□ -0.85
NUP54-207ENST00000508583 BCO2Q9BYV7 579 aa9.76□□□□□ -0.85
NUP54-207ENST00000508583 PRKD2Q9BZL6 878 aa9.76□□□□□ -0.85
NUP54-207ENST00000508583 DNAJC25Q9H1X3 360 aa9.76□□□□□ -0.85
NUP54-207ENST00000508583 EHD2Q9NZN4 543 aa9.76□□□□□ -0.85
NUP54-207ENST00000508583 NR2E1Q9Y466 385 aa9.76□□□□□ -0.85
NUP54-207ENST00000508583 FARP1Q9Y4F1 1045 aaPredicted RBP9.76□□□□□ -0.85
NUP54-207ENST00000508583 ASB3Q9Y575 518 aa9.76□□□□□ -0.85
NUP54-207ENST00000508583 INSL5Q9Y5Q6 135 aa9.76□□□□□ -0.85
NUP54-207ENST00000508583 SYCE3A1L190 88 aa9.75□□□□□ -0.85
NUP54-207ENST00000508583 MTMR11A4FU01 709 aa9.75□□□□□ -0.85
NUP54-207ENST00000508583 PES1O00541 588 aaKnown RBP9.75□□□□□ -0.85
NUP54-207ENST00000508583 MBTPS2O43462 519 aa9.75□□□□□ -0.85
NUP54-207ENST00000508583 FGF19O95750 216 aa9.75□□□□□ -0.85
NUP54-207ENST00000508583 SPATA31D3P0C874 917 aa9.75□□□□□ -0.85
NUP54-207ENST00000508583 CDK11BP21127 795 aaKnown RBP9.75□□□□□ -0.85
NUP54-207ENST00000508583 ASPAP45381 313 aa9.75□□□□□ -0.85
NUP54-207ENST00000508583 ZNF165P49910 485 aa9.75□□□□□ -0.85
NUP54-207ENST00000508583 RPL10AP62906 217 aaKnown RBP9.75□□□□□ -0.85
NUP54-207ENST00000508583 INCA1Q0VD86 236 aa9.75□□□□□ -0.85
NUP54-207ENST00000508583 NFKBIBQ15653 356 aa9.75□□□□□ -0.85
NUP54-207ENST00000508583 CLUL1Q15846 466 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms