RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 DIS3LQ8TF46 1054 aaKnown RBP6.76□□□□□ -1.33
TOPBP1-206ENST00000508524 DDX17Q92841 729 aaKnown RBP6.76□□□□□ -1.33
TOPBP1-206ENST00000508524 C1GALT1C1Q96EU7 318 aa6.76□□□□□ -1.33
TOPBP1-206ENST00000508524 CGRRF1Q99675 332 aa6.76□□□□□ -1.33
TOPBP1-206ENST00000508524 PNMA8BQ9ULN7 279 aaPredicted RBP6.76□□□□□ -1.33
TOPBP1-206ENST00000508524 STXBP5LQ9Y2K9 1186 aa6.76□□□□□ -1.33
TOPBP1-206ENST00000508524 MASP2O00187 686 aa6.75□□□□□ -1.33
TOPBP1-206ENST00000508524 TRIAP1O43715 76 aa6.75□□□□□ -1.33
TOPBP1-206ENST00000508524 DNAJB5O75953 348 aa6.75□□□□□ -1.33
TOPBP1-206ENST00000508524 PIM1P11309 404 aaPredicted RBP6.75□□□□□ -1.33
TOPBP1-206ENST00000508524 HDCP19113 662 aa6.75□□□□□ -1.33
TOPBP1-206ENST00000508524 IL12RB1P42701 662 aa6.75□□□□□ -1.33
TOPBP1-206ENST00000508524 C21orf58P58505 322 aa6.75□□□□□ -1.33
TOPBP1-206ENST00000508524 CCDC142Q17RM4 750 aa6.75□□□□□ -1.33
TOPBP1-206ENST00000508524 CCDC157Q569K6 752 aa6.75□□□□□ -1.33
TOPBP1-206ENST00000508524 RBM20Q5T481 1227 aaKnown RBP6.75□□□□□ -1.33
TOPBP1-206ENST00000508524 JPH3Q8WXH2 748 aaPredicted RBP6.75□□□□□ -1.33
TOPBP1-206ENST00000508524 UROC1Q96N76 676 aa6.75□□□□□ -1.33
TOPBP1-206ENST00000508524 AIFM3Q96NN9 605 aa6.75□□□□□ -1.33
TOPBP1-206ENST00000508524 AMBRA1Q9C0C7 1298 aa6.75□□□□□ -1.33
TOPBP1-206ENST00000508524 KLC4Q9NSK0 619 aa6.75□□□□□ -1.33
TOPBP1-206ENST00000508524 ASB6Q9NWX5 421 aa6.75□□□□□ -1.33
TOPBP1-206ENST00000508524 ZNF180Q9UJW8 692 aa6.75□□□□□ -1.33
TOPBP1-206ENST00000508524 ENTPD2Q9Y5L3 495 aa6.75□□□□□ -1.33
TOPBP1-206ENST00000508524 LRRC3CA6NJW4 275 aa6.74□□□□□ -1.33
TOPBP1-206ENST00000508524 LINC00473A8K010 186 aa6.74□□□□□ -1.33
TOPBP1-206ENST00000508524 AP1G1O43747 822 aa6.74□□□□□ -1.33
TOPBP1-206ENST00000508524 ITGALP20701 1170 aa6.74□□□□□ -1.33
TOPBP1-206ENST00000508524 GCLCP48506 637 aaPredicted RBP6.74□□□□□ -1.33
TOPBP1-206ENST00000508524 FAM160B1Q5W0V3 765 aa6.74□□□□□ -1.33
TOPBP1-206ENST00000508524 GRASPQ7Z6J2 395 aaPredicted RBP6.74□□□□□ -1.33
TOPBP1-206ENST00000508524 TPH2Q8IWU9 490 aa6.74□□□□□ -1.33
TOPBP1-206ENST00000508524 FAM46DQ8NEK8 389 aa6.74□□□□□ -1.33
TOPBP1-206ENST00000508524 KLHDC4Q8TBB5 520 aa6.74□□□□□ -1.33
TOPBP1-206ENST00000508524 NELL1Q92832 810 aa6.74□□□□□ -1.33
TOPBP1-206ENST00000508524 VOPP1Q96AW1 172 aa6.74□□□□□ -1.33
TOPBP1-206ENST00000508524 CAMKK2Q96RR4 588 aa6.74□□□□□ -1.33
TOPBP1-206ENST00000508524 TIMP4Q99727 224 aa6.74□□□□□ -1.33
TOPBP1-206ENST00000508524 TPSD1Q9BZJ3 242 aa6.74□□□□□ -1.33
TOPBP1-206ENST00000508524 CDH19Q9H159 772 aa6.74□□□□□ -1.33
TOPBP1-206ENST00000508524 ARPP21Q9UBL0 812 aaPredicted RBP6.74□□□□□ -1.33
TOPBP1-206ENST00000508524 RAD54BQ9Y620 910 aa6.74□□□□□ -1.33
TOPBP1-206ENST00000508524 LOC105371045A0A1W2PR82 267 aa6.73□□□□□ -1.33
TOPBP1-206ENST00000508524 ZNF134P52741 427 aa6.73□□□□□ -1.33
TOPBP1-206ENST00000508524 EPHB1P54762 984 aa6.73□□□□□ -1.33
TOPBP1-206ENST00000508524 SOX8P57073 446 aa6.73□□□□□ -1.33
TOPBP1-206ENST00000508524 NHLH1Q02575 133 aa6.73□□□□□ -1.33
TOPBP1-206ENST00000508524 VPS53Q5VIR6 699 aa6.73□□□□□ -1.33
TOPBP1-206ENST00000508524 B3GNT9Q6UX72 402 aa6.73□□□□□ -1.33
TOPBP1-206ENST00000508524 RFKQ969G6 155 aa6.73□□□□□ -1.33
TOPBP1-206ENST00000508524 PBKQ96KB5 322 aa6.73□□□□□ -1.33
TOPBP1-206ENST00000508524 ACTRT3Q9BYD9 372 aa6.73□□□□□ -1.33
TOPBP1-206ENST00000508524 NMRK2Q9NPI5 230 aa6.73□□□□□ -1.33
TOPBP1-206ENST00000508524 HESX1Q9UBX0 185 aa6.73□□□□□ -1.33
TOPBP1-206ENST00000508524 PCDHA6Q9UN73 950 aa6.73□□□□□ -1.33
TOPBP1-206ENST00000508524 THRAP3Q9Y2W1 955 aaKnown RBP6.73□□□□□ -1.33
TOPBP1-206ENST00000508524 DCLK1O15075 740 aa6.72□□□□□ -1.33
TOPBP1-206ENST00000508524 ORC4O43929 436 aa6.72□□□□□ -1.33
TOPBP1-206ENST00000508524 C1RP00736 705 aa6.72□□□□□ -1.33
TOPBP1-206ENST00000508524 WT1P19544 449 aaPredicted RBP6.72□□□□□ -1.33
TOPBP1-206ENST00000508524 ITPKBP27987 946 aa6.72□□□□□ -1.33
TOPBP1-206ENST00000508524 CD38P28907 300 aa6.72□□□□□ -1.33
TOPBP1-206ENST00000508524 CD6P30203 668 aa6.72□□□□□ -1.33
TOPBP1-206ENST00000508524 RAB1AP62820 205 aa6.72□□□□□ -1.33
TOPBP1-206ENST00000508524 COLEC12Q5KU26 742 aa6.72□□□□□ -1.33
TOPBP1-206ENST00000508524 PCSK9Q8NBP7 692 aaKnown RBP6.72□□□□□ -1.33
TOPBP1-206ENST00000508524 FAM136AQ96C01 138 aa6.72□□□□□ -1.33
TOPBP1-206ENST00000508524 MTFMTQ96DP5 389 aaKnown RBP6.72□□□□□ -1.33
TOPBP1-206ENST00000508524 SPATA5L1Q9BVQ7 753 aa6.72□□□□□ -1.33
TOPBP1-206ENST00000508524 ARMT1Q9H993 441 aa6.72□□□□□ -1.33
TOPBP1-206ENST00000508524 GABBR1Q9UBS5 961 aa6.72□□□□□ -1.33
TOPBP1-206ENST00000508524 A0A088AWK7 358 aa6.71□□□□□ -1.34
TOPBP1-206ENST00000508524 H3BML4 177 aa6.71□□□□□ -1.34
TOPBP1-206ENST00000508524 PROP1O75360 226 aa6.71□□□□□ -1.34
TOPBP1-206ENST00000508524 RFPL1O75677 317 aa6.71□□□□□ -1.34
TOPBP1-206ENST00000508524 URI1O94763 535 aaPredicted RBP6.71□□□□□ -1.34
TOPBP1-206ENST00000508524 UNC5CO95185 931 aa6.71□□□□□ -1.34
TOPBP1-206ENST00000508524 ZNF37AP17032 561 aaPredicted RBP6.71□□□□□ -1.34
TOPBP1-206ENST00000508524 NCLP19338 710 aaKnown RBP6.71□□□□□ -1.34
TOPBP1-206ENST00000508524 PCSK6P29122 969 aa6.71□□□□□ -1.34
TOPBP1-206ENST00000508524 MRPS21P82921 87 aaKnown RBP6.71□□□□□ -1.34
TOPBP1-206ENST00000508524 KHDC1LQ5JSQ8 128 aa6.71□□□□□ -1.34
TOPBP1-206ENST00000508524 TMEM108Q6UXF1 575 aa6.71□□□□□ -1.34
TOPBP1-206ENST00000508524 EPM2AIP1Q7L775 607 aaPredicted RBP6.71□□□□□ -1.34
TOPBP1-206ENST00000508524 DENND1CQ8IV53 801 aa6.71□□□□□ -1.34
TOPBP1-206ENST00000508524 FKBP10Q96AY3 582 aa6.71□□□□□ -1.34
TOPBP1-206ENST00000508524 SARAFQ96BY9 339 aa6.71□□□□□ -1.34
TOPBP1-206ENST00000508524 MRGPRX1Q96LB2 322 aa6.71□□□□□ -1.34
TOPBP1-206ENST00000508524 LRGUKQ96M69 825 aa6.71□□□□□ -1.34
TOPBP1-206ENST00000508524 SLC46A1Q96NT5 459 aa6.71□□□□□ -1.34
TOPBP1-206ENST00000508524 TAAR9Q96RI9 348 aa6.71□□□□□ -1.34
TOPBP1-206ENST00000508524 ALG8Q9BVK2 526 aa6.71□□□□□ -1.34
TOPBP1-206ENST00000508524 SARS2Q9NP81 518 aaKnown RBP6.71□□□□□ -1.34
TOPBP1-206ENST00000508524 SERHLQ9NQF3 203 aa6.71□□□□□ -1.34
TOPBP1-206ENST00000508524 ANLNQ9NQW6 1124 aa6.71□□□□□ -1.34
TOPBP1-206ENST00000508524 ZIM2Q9NZV7 527 aa6.71□□□□□ -1.34
TOPBP1-206ENST00000508524 KAT6AQ92794 2004 aa6.71□□□□□ -1.34
TOPBP1-206ENST00000508524 RB1CC1Q8TDY2 1594 aa6.7□□□□□ -1.34
TOPBP1-206ENST00000508524 HSPA6P17066 643 aa6.7□□□□□ -1.34
TOPBP1-206ENST00000508524 PROK1P58294 105 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms