RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 IL21Q9HBE4 155 aa17.48■□□□□ 0.39
LMNA-222ENST00000508500 PCDHA7Q9UN72 937 aa17.48■□□□□ 0.39
LMNA-222ENST00000508500 L1RE1Q9UN81 338 aa17.48■□□□□ 0.39
LMNA-222ENST00000508500 DNAH14Q0VDD8 3507 aa17.48■□□□□ 0.39
LMNA-222ENST00000508500 HEPACAM2A8MVW5 462 aa17.47■□□□□ 0.39
LMNA-222ENST00000508500 TGFB1I1O43294 461 aa17.47■□□□□ 0.39
LMNA-222ENST00000508500 HCRTO43612 131 aa17.47■□□□□ 0.39
LMNA-222ENST00000508500 SP9P0CG40 484 aa17.47■□□□□ 0.39
LMNA-222ENST00000508500 HAPLN1P10915 354 aaPredicted RBP17.47■□□□□ 0.39
LMNA-222ENST00000508500 PSMC3P17980 439 aa17.47■□□□□ 0.39
LMNA-222ENST00000508500 GDI1P31150 447 aa17.47■□□□□ 0.39
LMNA-222ENST00000508500 CCDC142Q17RM4 750 aa17.47■□□□□ 0.39
LMNA-222ENST00000508500 ERMP1Q7Z2K6 904 aa17.47■□□□□ 0.39
LMNA-222ENST00000508500 METTL23Q86XA0 190 aa17.47■□□□□ 0.39
LMNA-222ENST00000508500 CBWD2Q8IUF1 395 aa17.47■□□□□ 0.39
LMNA-222ENST00000508500 MFSD6LQ8IWD5 586 aa17.47■□□□□ 0.39
LMNA-222ENST00000508500 HSCBQ8IWL3 235 aa17.47■□□□□ 0.39
LMNA-222ENST00000508500 THEM5Q8N1Q8 247 aa17.47■□□□□ 0.39
LMNA-222ENST00000508500 PDCL2Q8N4E4 241 aa17.47■□□□□ 0.39
LMNA-222ENST00000508500 OR5B17Q8NGF7 314 aa17.47■□□□□ 0.39
LMNA-222ENST00000508500 NOC3LQ8WTT2 800 aaKnown RBP17.47■□□□□ 0.39
LMNA-222ENST00000508500 CLDN23Q96B33 292 aa17.47■□□□□ 0.39
LMNA-222ENST00000508500 PKMYT1Q99640 499 aa17.47■□□□□ 0.39
LMNA-222ENST00000508500 SEPT5Q99719 369 aaPredicted RBP17.47■□□□□ 0.39
LMNA-222ENST00000508500 MTMR12Q9C0I1 747 aa17.47■□□□□ 0.39
LMNA-222ENST00000508500 BRD9Q9H8M2 597 aa17.47■□□□□ 0.39
LMNA-222ENST00000508500 ASB3Q9Y575 518 aa17.47■□□□□ 0.39
LMNA-222ENST00000508500 R4GN57 208 aa17.47■□□□□ 0.39
LMNA-222ENST00000508500 TULP1O00294 542 aaPredicted RBP17.46■□□□□ 0.39
LMNA-222ENST00000508500 POLR2DO15514 142 aaKnown RBP17.46■□□□□ 0.39
LMNA-222ENST00000508500 GABRR2P28476 465 aa17.46■□□□□ 0.39
LMNA-222ENST00000508500 GPR15P49685 360 aa17.46■□□□□ 0.39
LMNA-222ENST00000508500 ASIC1P78348 528 aa17.46■□□□□ 0.39
LMNA-222ENST00000508500 MGAT5BQ3V5L5 792 aa17.46■□□□□ 0.39
LMNA-222ENST00000508500 TMEM150AQ86TG1 271 aa17.46■□□□□ 0.39
LMNA-222ENST00000508500 CSGALNACT2Q8N6G5 542 aa17.46■□□□□ 0.39
LMNA-222ENST00000508500 IQUBQ8NA54 791 aa17.46■□□□□ 0.39
LMNA-222ENST00000508500 STKLD1Q8NE28 680 aa17.46■□□□□ 0.39
LMNA-222ENST00000508500 GIPC2Q8TF65 315 aa17.46■□□□□ 0.39
LMNA-222ENST00000508500 CHAMP1Q96JM3 812 aa17.46■□□□□ 0.39
LMNA-222ENST00000508500 ZNF560Q96MR9 790 aa17.46■□□□□ 0.39
LMNA-222ENST00000508500 GPR88Q9GZN0 384 aa17.46■□□□□ 0.39
LMNA-222ENST00000508500 BLZF1Q9H2G9 400 aa17.46■□□□□ 0.39
LMNA-222ENST00000508500 HELZP42694 1942 aaKnown RBP17.45■□□□□ 0.38
LMNA-222ENST00000508500 EIF3DO15371 548 aaKnown RBP eCLIP17.45■□□□□ 0.38
LMNA-222ENST00000508500 HMGA1P17096 107 aaKnown RBP17.45■□□□□ 0.38
LMNA-222ENST00000508500 PNPLA4P41247 253 aa17.45■□□□□ 0.38
LMNA-222ENST00000508500 TUFMP49411 452 aaKnown RBP17.45■□□□□ 0.38
LMNA-222ENST00000508500 CYP4F8P98187 520 aa17.45■□□□□ 0.38
LMNA-222ENST00000508500 DNM1Q05193 864 aaKnown RBP17.45■□□□□ 0.38
LMNA-222ENST00000508500 BFSP1Q12934 665 aa17.45■□□□□ 0.38
LMNA-222ENST00000508500 FAM26FQ5R3K3 315 aa17.45■□□□□ 0.38
LMNA-222ENST00000508500 RESP18Q5W5W9 173 aa17.45■□□□□ 0.38
LMNA-222ENST00000508500 ARID3BQ8IVW6 561 aaPredicted RBP17.45■□□□□ 0.38
LMNA-222ENST00000508500 LRRC52Q8N7C0 313 aa17.45■□□□□ 0.38
LMNA-222ENST00000508500 SPPL2BQ8TCT7 592 aa17.45■□□□□ 0.38
LMNA-222ENST00000508500 CACTINQ8WUQ7 758 aaKnown RBP17.45■□□□□ 0.38
LMNA-222ENST00000508500 DEPDC1BQ8WUY9 529 aa17.45■□□□□ 0.38
LMNA-222ENST00000508500 SCFD1Q8WVM8 642 aa17.45■□□□□ 0.38
LMNA-222ENST00000508500 IRF7Q92985 503 aa17.45■□□□□ 0.38
LMNA-222ENST00000508500 LRRC27Q9C0I9 530 aa17.45■□□□□ 0.38
LMNA-222ENST00000508500 ATXN3LQ9H3M9 355 aa17.45■□□□□ 0.38
LMNA-222ENST00000508500 SLITRK6Q9H5Y7 841 aa17.45■□□□□ 0.38
LMNA-222ENST00000508500 TRPV5Q9NQA5 729 aa17.45■□□□□ 0.38
LMNA-222ENST00000508500 INTS13Q9NVM9 706 aa17.45■□□□□ 0.38
LMNA-222ENST00000508500 GDAP2Q9NXN4 497 aa17.45■□□□□ 0.38
LMNA-222ENST00000508500 ABI2Q9NYB9 513 aaPredicted RBP17.45■□□□□ 0.38
LMNA-222ENST00000508500 HSPBP1Q9NZL4 362 aa17.45■□□□□ 0.38
LMNA-222ENST00000508500 ITGA11Q9UKX5 1188 aa17.45■□□□□ 0.38
LMNA-222ENST00000508500 CEP250Q9BV73 2442 aa17.45■□□□□ 0.38
LMNA-222ENST00000508500 LMNAP02545 664 aaKnown RBP17.44■□□□□ 0.38
LMNA-222ENST00000508500 ACAT1P24752 427 aaKnown RBP17.44■□□□□ 0.38
LMNA-222ENST00000508500 ID4P47928 161 aa17.44■□□□□ 0.38
LMNA-222ENST00000508500 FCHO2Q0JRZ9 810 aa17.44■□□□□ 0.38
LMNA-222ENST00000508500 CUL4BQ13620 913 aa17.44■□□□□ 0.38
LMNA-222ENST00000508500 SOWAHAQ2M3V2 549 aa17.44■□□□□ 0.38
LMNA-222ENST00000508500 GPR158Q5T848 1215 aa17.44■□□□□ 0.38
LMNA-222ENST00000508500 ZNF852Q6ZMS4 543 aa17.44■□□□□ 0.38
LMNA-222ENST00000508500 UNC13DQ70J99 1090 aa17.44■□□□□ 0.38
LMNA-222ENST00000508500 LIMS2Q7Z4I7 341 aa17.44■□□□□ 0.38
LMNA-222ENST00000508500 ITIH5Q86UX2 942 aa17.44■□□□□ 0.38
LMNA-222ENST00000508500 C2orf15Q8WU43 125 aaKnown RBP17.44■□□□□ 0.38
LMNA-222ENST00000508500 BCO2Q9BYV7 579 aa17.44■□□□□ 0.38
LMNA-222ENST00000508500 GZF1Q9H116 711 aaPredicted RBP17.44■□□□□ 0.38
LMNA-222ENST00000508500 AGPAT3Q9NRZ7 376 aa17.44■□□□□ 0.38
LMNA-222ENST00000508500 DDX43Q9NXZ2 648 aaKnown RBP17.44■□□□□ 0.38
LMNA-222ENST00000508500 RCOR1Q9UKL0 485 aa17.44■□□□□ 0.38
LMNA-222ENST00000508500 ZDHHC9Q9Y397 364 aa17.44■□□□□ 0.38
LMNA-222ENST00000508500 GPR179Q6PRD1 2367 aa17.43■□□□□ 0.38
LMNA-222ENST00000508500 ZNF233A6NK53 670 aa17.43■□□□□ 0.38
LMNA-222ENST00000508500 GABRDO14764 452 aa17.43■□□□□ 0.38
LMNA-222ENST00000508500 ZNF263O14978 683 aa17.43■□□□□ 0.38
LMNA-222ENST00000508500 KIAA0391O15091 583 aaKnown RBP17.43■□□□□ 0.38
LMNA-222ENST00000508500 CLIC2O15247 247 aa17.43■□□□□ 0.38
LMNA-222ENST00000508500 PRAMEF12O95522 483 aa17.43■□□□□ 0.38
LMNA-222ENST00000508500 KRT19P08727 400 aa17.43■□□□□ 0.38
LMNA-222ENST00000508500 TMEM191BP0C7N4 346 aa17.43■□□□□ 0.38
LMNA-222ENST00000508500 RBP5P82980 135 aa17.43■□□□□ 0.38
LMNA-222ENST00000508500 AMPD3Q01432 767 aa17.43■□□□□ 0.38
LMNA-222ENST00000508500 SMARCB1Q12824 385 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms