RNA–Protein interactions for RNA: ENST00000508461.5

SMG7-214, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SMG7, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-214ENST00000508461 KRT7P08729 469 aa13.55□□□□□ -0.24
SMG7-214ENST00000508461 ABCD1P33897 745 aa13.55□□□□□ -0.24
SMG7-214ENST00000508461 MMP13P45452 471 aa13.55□□□□□ -0.24
SMG7-214ENST00000508461 PKN2Q16513 984 aaKnown RBP13.55□□□□□ -0.24
SMG7-214ENST00000508461 ATF7IP2Q5U623 682 aa13.55□□□□□ -0.24
SMG7-214ENST00000508461 CHADLQ6NUI6 762 aa13.55□□□□□ -0.24
SMG7-214ENST00000508461 SLC39A4Q6P5W5 647 aa13.55□□□□□ -0.24
SMG7-214ENST00000508461 SPOCD1Q6ZMY3 1216 aa13.55□□□□□ -0.24
SMG7-214ENST00000508461 MAP7D3Q8IWC1 876 aa13.55□□□□□ -0.24
SMG7-214ENST00000508461 C12orf56Q8IXR9 622 aa13.55□□□□□ -0.24
SMG7-214ENST00000508461 ZDHHC14Q8IZN3 488 aa13.55□□□□□ -0.24
SMG7-214ENST00000508461 ZNF516Q92618 1163 aa13.55□□□□□ -0.24
SMG7-214ENST00000508461 MFSD14AQ96MC6 490 aa13.55□□□□□ -0.24
SMG7-214ENST00000508461 RAB3IPQ96QF0 476 aaPredicted RBP13.55□□□□□ -0.24
SMG7-214ENST00000508461 GPATCH2LQ9NWQ4 482 aa13.55□□□□□ -0.24
SMG7-214ENST00000508461 CNTNAP1P78357 1384 aa13.55□□□□□ -0.24
SMG7-214ENST00000508461 MROH7Q68CQ1 1323 aa13.55□□□□□ -0.24
SMG7-214ENST00000508461 TBC1D12O60347 775 aa13.55□□□□□ -0.24
SMG7-214ENST00000508461 ZC3H11AO75152 810 aaKnown RBP eCLIP13.55□□□□□ -0.24
SMG7-214ENST00000508461 PDGFRAP16234 1089 aa13.55□□□□□ -0.24
SMG7-214ENST00000508461 NOMO3P69849 1222 aa13.55□□□□□ -0.24
SMG7-214ENST00000508461 FBXO16Q8IX29 292 aaPredicted RBP13.55□□□□□ -0.24
SMG7-214ENST00000508461 EXD1Q8NHP7 514 aa13.55□□□□□ -0.24
SMG7-214ENST00000508461 TTC25Q96NG3 672 aa13.55□□□□□ -0.24
SMG7-214ENST00000508461 FAM167BQ9BTA0 163 aa13.55□□□□□ -0.24
SMG7-214ENST00000508461 RAB6BQ9NRW1 208 aa13.55□□□□□ -0.24
SMG7-214ENST00000508461 XPO7Q9UIA9 1087 aaKnown RBP13.55□□□□□ -0.24
SMG7-214ENST00000508461 STRIP2Q9ULQ0 834 aa13.55□□□□□ -0.24
SMG7-214ENST00000508461 TRIM33Q9UPN9 1127 aa13.55□□□□□ -0.24
SMG7-214ENST00000508461 APRTP07741 180 aa13.55□□□□□ -0.24
SMG7-214ENST00000508461 SAT1P21673 171 aa13.55□□□□□ -0.24
SMG7-214ENST00000508461 SLC20A2Q08357 652 aa13.55□□□□□ -0.24
SMG7-214ENST00000508461 FKBP1CQ5VVH2 108 aa13.55□□□□□ -0.24
SMG7-214ENST00000508461 EFCAB12Q6NXP0 572 aa13.55□□□□□ -0.24
SMG7-214ENST00000508461 SAMD3Q8N6K7 520 aa13.55□□□□□ -0.24
SMG7-214ENST00000508461 GBP7Q8N8V2 638 aaPredicted RBP13.55□□□□□ -0.24
SMG7-214ENST00000508461 ATP11CQ8NB49 1132 aa13.55□□□□□ -0.24
SMG7-214ENST00000508461 CCNYQ8ND76 341 aa13.55□□□□□ -0.24
SMG7-214ENST00000508461 PRCCQ92733 491 aaPredicted RBP13.55□□□□□ -0.24
SMG7-214ENST00000508461 UBN1Q9NPG3 1134 aa13.55□□□□□ -0.24
SMG7-214ENST00000508461 PNMA3Q9UL41 463 aa13.55□□□□□ -0.24
SMG7-214ENST00000508461 TOM1L1O75674 476 aa13.54□□□□□ -0.24
SMG7-214ENST00000508461 CPP00450 1065 aa13.54□□□□□ -0.24
SMG7-214ENST00000508461 TCF4P15884 667 aa13.54□□□□□ -0.24
SMG7-214ENST00000508461 APOBEC3GQ9HC16 384 aaKnown RBP13.54□□□□□ -0.24
SMG7-214ENST00000508461 MARCOQ9UEW3 520 aaPredicted RBP13.54□□□□□ -0.24
SMG7-214ENST00000508461 A6NJR5 290 aa13.54□□□□□ -0.24
SMG7-214ENST00000508461 C19orf81C9J6K1 198 aa13.54□□□□□ -0.24
SMG7-214ENST00000508461 DIAPH2O60879 1101 aa13.54□□□□□ -0.24
SMG7-214ENST00000508461 EFNA5P52803 228 aa13.54□□□□□ -0.24
SMG7-214ENST00000508461 PTK6Q13882 451 aa13.54□□□□□ -0.24
SMG7-214ENST00000508461 PIGHQ14442 188 aaPredicted RBP13.54□□□□□ -0.24
SMG7-214ENST00000508461 FASTKD3Q14CZ7 662 aaKnown RBP13.54□□□□□ -0.24
SMG7-214ENST00000508461 AMHR2Q16671 573 aa13.54□□□□□ -0.24
SMG7-214ENST00000508461 TFDP3Q5H9I0 405 aa13.54□□□□□ -0.24
SMG7-214ENST00000508461 MDH1BQ5I0G3 518 aa13.54□□□□□ -0.24
SMG7-214ENST00000508461 XRRA1Q6P2D8 792 aa13.54□□□□□ -0.24
SMG7-214ENST00000508461 CNKSR2Q8WXI2 1034 aa13.54□□□□□ -0.24
SMG7-214ENST00000508461 SLCO1B3Q9NPD5 702 aa13.54□□□□□ -0.24
SMG7-214ENST00000508461 TXLNGQ9NUQ3 528 aa13.54□□□□□ -0.24
SMG7-214ENST00000508461 MAST2Q6P0Q8 1798 aa13.54□□□□□ -0.24
SMG7-214ENST00000508461 OGTO15294 1046 aa13.54□□□□□ -0.24
SMG7-214ENST00000508461 KCNN4O15554 427 aa13.54□□□□□ -0.24
SMG7-214ENST00000508461 LYPLA2O95372 231 aa13.54□□□□□ -0.24
SMG7-214ENST00000508461 RASSF2P50749 326 aa13.54□□□□□ -0.24
SMG7-214ENST00000508461 KCNJ2P63252 427 aa13.54□□□□□ -0.24
SMG7-214ENST00000508461 ZRSR2Q15696 482 aaKnown RBP13.54□□□□□ -0.24
SMG7-214ENST00000508461 C6orf163Q5TEZ5 329 aa13.54□□□□□ -0.24
SMG7-214ENST00000508461 DPY19L2P1Q6NXN4 242 aa13.54□□□□□ -0.24
SMG7-214ENST00000508461 FERMT1Q9BQL6 677 aa13.54□□□□□ -0.24
SMG7-214ENST00000508461 MTFR1LQ9H019 292 aa13.54□□□□□ -0.24
SMG7-214ENST00000508461 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.54□□□□□ -0.24
SMG7-214ENST00000508461 ZFP69BQ9UJL9 534 aa13.54□□□□□ -0.24
SMG7-214ENST00000508461 LOC102724159A0A0B4J2E5 919 aa13.53□□□□□ -0.24
SMG7-214ENST00000508461 SNX3O60493 162 aa13.53□□□□□ -0.24
SMG7-214ENST00000508461 LPXNO60711 386 aa13.53□□□□□ -0.24
SMG7-214ENST00000508461 KCNA2P16389 499 aa13.53□□□□□ -0.24
SMG7-214ENST00000508461 UBA1P22314 1058 aaKnown RBP13.53□□□□□ -0.24
SMG7-214ENST00000508461 PEX19P40855 299 aa13.53□□□□□ -0.24
SMG7-214ENST00000508461 CAPSQ13938 189 aa13.53□□□□□ -0.24
SMG7-214ENST00000508461 PWP2Q15269 919 aaKnown RBP13.53□□□□□ -0.24
SMG7-214ENST00000508461 SURF1Q15526 300 aa13.53□□□□□ -0.24
SMG7-214ENST00000508461 APOBEC3FQ8IUX4 373 aaKnown RBP13.53□□□□□ -0.24
SMG7-214ENST00000508461 SPOCK2Q92563 424 aa13.53□□□□□ -0.24
SMG7-214ENST00000508461 TLCD1Q96CP7 247 aa13.53□□□□□ -0.24
SMG7-214ENST00000508461 TMEM237Q96Q45 408 aa13.53□□□□□ -0.24
SMG7-214ENST00000508461 AVENQ9NQS1 362 aaPredicted RBP13.53□□□□□ -0.24
SMG7-214ENST00000508461 HAO1Q9UJM8 370 aa13.53□□□□□ -0.24
SMG7-214ENST00000508461 PHTF1Q9UMS5 762 aa13.53□□□□□ -0.24
SMG7-214ENST00000508461 KAT6AQ92794 2004 aa13.53□□□□□ -0.24
SMG7-214ENST00000508461 RFC1P35251 1148 aaPredicted RBP13.53□□□□□ -0.24
SMG7-214ENST00000508461 BCAR1P56945 870 aa13.53□□□□□ -0.24
SMG7-214ENST00000508461 ROR1Q01973 937 aa13.53□□□□□ -0.24
SMG7-214ENST00000508461 LGSNQ5TDP6 509 aa13.53□□□□□ -0.24
SMG7-214ENST00000508461 FBXO36Q8NEA4 188 aa13.53□□□□□ -0.24
SMG7-214ENST00000508461 COPS5Q92905 334 aa13.53□□□□□ -0.24
SMG7-214ENST00000508461 CPB2Q96IY4 423 aa13.53□□□□□ -0.24
SMG7-214ENST00000508461 FAM167AQ96KS9 214 aa13.53□□□□□ -0.24
SMG7-214ENST00000508461 PORCNQ9H237 461 aa13.53□□□□□ -0.24
SMG7-214ENST00000508461 DDX56Q9NY93 547 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms