RNA–Protein interactions for RNA: ENST00000508117.6

CAST-220, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-220ENST00000508117 TRIM16O95361 564 aa9.96□□□□□ -0.82
CAST-220ENST00000508117 CAPNS1P04632 268 aa9.96□□□□□ -0.82
CAST-220ENST00000508117 MCF2P10911 925 aa9.96□□□□□ -0.82
CAST-220ENST00000508117 LIG1P18858 919 aa9.96□□□□□ -0.82
CAST-220ENST00000508117 MUTP22033 750 aa9.96□□□□□ -0.82
CAST-220ENST00000508117 PROZP22891 400 aa9.96□□□□□ -0.82
CAST-220ENST00000508117 RPA1P27694 616 aa9.96□□□□□ -0.82
CAST-220ENST00000508117 GABRR2P28476 465 aa9.96□□□□□ -0.82
CAST-220ENST00000508117 CDC25CP30307 473 aa9.96□□□□□ -0.82
CAST-220ENST00000508117 TXKP42681 527 aa9.96□□□□□ -0.82
CAST-220ENST00000508117 DUSP4Q13115 394 aa9.96□□□□□ -0.82
CAST-220ENST00000508117 MYBPC2Q14324 1141 aa9.96□□□□□ -0.82
CAST-220ENST00000508117 CCDC26Q8TAB7 109 aa9.96□□□□□ -0.82
CAST-220ENST00000508117 ACDQ96AP0 544 aa9.96□□□□□ -0.82
CAST-220ENST00000508117 ACO2Q99798 780 aaKnown RBP9.96□□□□□ -0.82
CAST-220ENST00000508117 SLC32A1Q9H598 525 aa9.96□□□□□ -0.82
CAST-220ENST00000508117 HPS4Q9NQG7 708 aa9.96□□□□□ -0.82
CAST-220ENST00000508117 GKN1Q9NS71 199 aa9.96□□□□□ -0.82
CAST-220ENST00000508117 HELZ2Q9BYK8 2649 aaKnown RBP9.96□□□□□ -0.82
CAST-220ENST00000508117 ZNF638Q14966 1978 aaKnown RBP9.95□□□□□ -0.82
CAST-220ENST00000508117 ARHGEF35A5YM69 484 aa9.95□□□□□ -0.82
CAST-220ENST00000508117 ABLIM1O14639 778 aa9.95□□□□□ -0.82
CAST-220ENST00000508117 NEMFO60524 1076 aa9.95□□□□□ -0.82
CAST-220ENST00000508117 MED24O75448 989 aa9.95□□□□□ -0.82
CAST-220ENST00000508117 EGFP01133 1207 aa9.95□□□□□ -0.82
CAST-220ENST00000508117 NEFLP07196 543 aa9.95□□□□□ -0.82
CAST-220ENST00000508117 LRPAP1P30533 357 aa9.95□□□□□ -0.82
CAST-220ENST00000508117 PRSS12P56730 875 aa9.95□□□□□ -0.82
CAST-220ENST00000508117 LMAN2Q12907 356 aa9.95□□□□□ -0.82
CAST-220ENST00000508117 ZNF568Q3ZCX4 644 aa9.95□□□□□ -0.82
CAST-220ENST00000508117 USP39Q53GS9 565 aaKnown RBP9.95□□□□□ -0.82
CAST-220ENST00000508117 PROSER1Q86XN7 944 aa9.95□□□□□ -0.82
CAST-220ENST00000508117 C18orf25Q96B23 403 aaPredicted RBP9.95□□□□□ -0.82
CAST-220ENST00000508117 PGLYRP2Q96PD5 576 aa9.95□□□□□ -0.82
CAST-220ENST00000508117 HHIPQ96QV1 700 aa9.95□□□□□ -0.82
CAST-220ENST00000508117 KIFC3Q9BVG8 833 aa9.95□□□□□ -0.82
CAST-220ENST00000508117 MRPL4Q9BYD3 311 aaKnown RBP9.95□□□□□ -0.82
CAST-220ENST00000508117 IL21Q9HBE4 155 aa9.95□□□□□ -0.82
CAST-220ENST00000508117 TSR3Q9UJK0 312 aaKnown RBP9.95□□□□□ -0.82
CAST-220ENST00000508117 TBX20Q9UMR3 447 aa9.95□□□□□ -0.82
CAST-220ENST00000508117 FREM2Q5SZK8 3169 aa9.94□□□□□ -0.82
CAST-220ENST00000508117 ACACAQ13085 2346 aa9.94□□□□□ -0.82
CAST-220ENST00000508117 MTMR11A4FU01 709 aa9.94□□□□□ -0.82
CAST-220ENST00000508117 OTOL1A6NHN0 477 aaPredicted RBP9.94□□□□□ -0.82
CAST-220ENST00000508117 DCLK1O15075 740 aa9.94□□□□□ -0.82
CAST-220ENST00000508117 MEFVO15553 781 aaPredicted RBP9.94□□□□□ -0.82
CAST-220ENST00000508117 EPB41L2O43491 1005 aaKnown RBP9.94□□□□□ -0.82
CAST-220ENST00000508117 HYAL3O43820 417 aaPredicted RBP9.94□□□□□ -0.82
CAST-220ENST00000508117 OR4Q2P0C623 313 aa9.94□□□□□ -0.82
CAST-220ENST00000508117 TYMPP19971 482 aa9.94□□□□□ -0.82
CAST-220ENST00000508117 PAX3P23760 479 aa9.94□□□□□ -0.82
CAST-220ENST00000508117 GBP1P32455 592 aa9.94□□□□□ -0.82
CAST-220ENST00000508117 RDXP35241 583 aaKnown RBP9.94□□□□□ -0.82
CAST-220ENST00000508117 KRT2P35908 639 aa9.94□□□□□ -0.82
CAST-220ENST00000508117 DPP6P42658 865 aa9.94□□□□□ -0.82
CAST-220ENST00000508117 TUFMP49411 452 aaKnown RBP9.94□□□□□ -0.82
CAST-220ENST00000508117 OSTNP61366 133 aa9.94□□□□□ -0.82
CAST-220ENST00000508117 IRX4P78413 519 aa9.94□□□□□ -0.82
CAST-220ENST00000508117 NR5A1Q13285 461 aa9.94□□□□□ -0.82
CAST-220ENST00000508117 DMC1Q14565 340 aa9.94□□□□□ -0.82
CAST-220ENST00000508117 SOWAHCQ53LP3 525 aaPredicted RBP9.94□□□□□ -0.82
CAST-220ENST00000508117 MPZL3Q6UWV2 235 aa9.94□□□□□ -0.82
CAST-220ENST00000508117 CYP2U1Q7Z449 544 aa9.94□□□□□ -0.82
CAST-220ENST00000508117 RASSF3Q86WH2 238 aa9.94□□□□□ -0.82
CAST-220ENST00000508117 GPIHBP1Q8IV16 184 aa9.94□□□□□ -0.82
CAST-220ENST00000508117 CMTM8Q8IZV2 173 aa9.94□□□□□ -0.82
CAST-220ENST00000508117 DEFB124Q8NES8 71 aa9.94□□□□□ -0.82
CAST-220ENST00000508117 WASF1Q92558 559 aa9.94□□□□□ -0.82
CAST-220ENST00000508117 P2RY13Q9BPV8 354 aa9.94□□□□□ -0.82
CAST-220ENST00000508117 SLC46A2Q9BY10 475 aa9.94□□□□□ -0.82
CAST-220ENST00000508117 TM6SF1Q9BZW5 370 aa9.94□□□□□ -0.82
CAST-220ENST00000508117 KIF9Q9HAQ2 790 aa9.94□□□□□ -0.82
CAST-220ENST00000508117 PLEKHA5Q9HAU0 1116 aa9.94□□□□□ -0.82
CAST-220ENST00000508117 BRMS1Q9HCU9 246 aa9.94□□□□□ -0.82
CAST-220ENST00000508117 GJB4Q9NTQ9 266 aa9.94□□□□□ -0.82
CAST-220ENST00000508117 ARHGAP28Q9P2N2 729 aa9.94□□□□□ -0.82
CAST-220ENST00000508117 GPSM3Q9Y4H4 160 aa9.94□□□□□ -0.82
CAST-220ENST00000508117 CYP46A1Q9Y6A2 500 aa9.94□□□□□ -0.82
CAST-220ENST00000508117 ASH1LQ9NR48 2969 aaKnown RBP9.94□□□□□ -0.82
CAST-220ENST00000508117 GON4LQ3T8J9 2241 aa9.94□□□□□ -0.82
CAST-220ENST00000508117 PTPRDP23468 1912 aa9.94□□□□□ -0.82
CAST-220ENST00000508117 TNRC6BQ9UPQ9 1833 aaKnown RBP9.93□□□□□ -0.82
CAST-220ENST00000508117 CYP3A5P20815 502 aa9.93□□□□□ -0.82
CAST-220ENST00000508117 DDX6P26196 483 aaKnown RBP eCLIP9.93□□□□□ -0.82
CAST-220ENST00000508117 GALK1P51570 392 aa9.93□□□□□ -0.82
CAST-220ENST00000508117 ZNF268Q14587 947 aaPredicted RBP9.93□□□□□ -0.82
CAST-220ENST00000508117 VEPH1Q14D04 833 aa9.93□□□□□ -0.82
CAST-220ENST00000508117 PDGFRLQ15198 375 aa9.93□□□□□ -0.82
CAST-220ENST00000508117 ZBTB6Q15916 424 aa9.93□□□□□ -0.82
CAST-220ENST00000508117 SLC10A6Q3KNW5 377 aa9.93□□□□□ -0.82
CAST-220ENST00000508117 PIP4P1Q86T03 277 aa9.93□□□□□ -0.82
CAST-220ENST00000508117 USP37Q86T82 979 aa9.93□□□□□ -0.82
CAST-220ENST00000508117 ATAD1Q8NBU5 361 aa9.93□□□□□ -0.82
CAST-220ENST00000508117 RPLP0P6Q8NHW5 317 aa9.93□□□□□ -0.82
CAST-220ENST00000508117 ERMNQ8TAM6 284 aa9.93□□□□□ -0.82
CAST-220ENST00000508117 CNOT6LQ96LI5 555 aaKnown RBP9.93□□□□□ -0.82
CAST-220ENST00000508117 GCNAQ96QF7 691 aa9.93□□□□□ -0.82
CAST-220ENST00000508117 TSPAN18Q96SJ8 248 aa9.93□□□□□ -0.82
CAST-220ENST00000508117 TARS2Q9BW92 718 aaKnown RBP9.93□□□□□ -0.82
CAST-220ENST00000508117 EBF3Q9H4W6 596 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms