RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 GPRC5BQ9NZH0 403 aa4.92□□□□□ -1.62
HMGB1P28-201ENST00000507778 RNF181Q9P0P0 153 aa4.92□□□□□ -1.62
HMGB1P28-201ENST00000507778 HESX1Q9UBX0 185 aa4.92□□□□□ -1.62
HMGB1P28-201ENST00000507778 RAPGEFL1Q9UHV5 662 aa4.92□□□□□ -1.62
HMGB1P28-201ENST00000507778 ITGB1BP2Q9UKP3 347 aa4.92□□□□□ -1.62
HMGB1P28-201ENST00000507778 MTO1Q9Y2Z2 717 aaKnown RBP4.92□□□□□ -1.62
HMGB1P28-201ENST00000507778 NEU2Q9Y3R4 380 aa4.92□□□□□ -1.62
HMGB1P28-201ENST00000507778 CHST2Q9Y4C5 530 aa4.92□□□□□ -1.62
HMGB1P28-201ENST00000507778 CEP83Q9Y592 693 aa4.92□□□□□ -1.62
HMGB1P28-201ENST00000507778 RAD54BQ9Y620 910 aa4.92□□□□□ -1.62
HMGB1P28-201ENST00000507778 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.91□□□□□ -1.62
HMGB1P28-201ENST00000507778 LOC102724159A0A0B4J2E5 919 aa4.91□□□□□ -1.62
HMGB1P28-201ENST00000507778 A0A1W2PPC4 97 aa4.91□□□□□ -1.62
HMGB1P28-201ENST00000507778 CCDC78A2IDD5 438 aa4.91□□□□□ -1.62
HMGB1P28-201ENST00000507778 AHRRA9YTQ3 701 aa4.91□□□□□ -1.62
HMGB1P28-201ENST00000507778 F5H423 210 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P28-201ENST00000507778 IFRD1O00458 451 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P28-201ENST00000507778 RASSF9O75901 435 aa4.91□□□□□ -1.62
HMGB1P28-201ENST00000507778 SOAT2O75908 522 aa4.91□□□□□ -1.62
HMGB1P28-201ENST00000507778 TXNP10599 105 aaKnown RBP4.91□□□□□ -1.62
HMGB1P28-201ENST00000507778 HARSP12081 509 aaKnown RBP4.91□□□□□ -1.62
HMGB1P28-201ENST00000507778 ABCB4P21439 1286 aa4.91□□□□□ -1.62
HMGB1P28-201ENST00000507778 FGFR2P21802 821 aa4.91□□□□□ -1.62
HMGB1P28-201ENST00000507778 OCA2Q04671 838 aa4.91□□□□□ -1.62
HMGB1P28-201ENST00000507778 PMS2P11Q13670 270 aa4.91□□□□□ -1.62
HMGB1P28-201ENST00000507778 PWP2Q15269 919 aaKnown RBP4.91□□□□□ -1.62
HMGB1P28-201ENST00000507778 RABL3Q5HYI8 236 aa4.91□□□□□ -1.62
HMGB1P28-201ENST00000507778 BEND5Q7L4P6 421 aa4.91□□□□□ -1.62
HMGB1P28-201ENST00000507778 MYLK4Q86YV6 388 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P28-201ENST00000507778 TMPRSS6Q8IU80 811 aa4.91□□□□□ -1.62
HMGB1P28-201ENST00000507778 YAF2Q8IY57 180 aa4.91□□□□□ -1.62
HMGB1P28-201ENST00000507778 PSD4Q8NDX1 1056 aa4.91□□□□□ -1.62
HMGB1P28-201ENST00000507778 POC1BQ8TC44 478 aa4.91□□□□□ -1.62
HMGB1P28-201ENST00000507778 ZNF483Q8TF39 744 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P28-201ENST00000507778 LRIG1Q96JA1 1093 aa4.91□□□□□ -1.62
HMGB1P28-201ENST00000507778 SLC46A1Q96NT5 459 aa4.91□□□□□ -1.62
HMGB1P28-201ENST00000507778 HEPHQ9BQS7 1158 aa4.91□□□□□ -1.62
HMGB1P28-201ENST00000507778 TEX101Q9BY14 249 aa4.91□□□□□ -1.62
HMGB1P28-201ENST00000507778 CHMP4AQ9BY43 222 aa4.91□□□□□ -1.62
HMGB1P28-201ENST00000507778 TTYH3Q9C0H2 523 aa4.91□□□□□ -1.62
HMGB1P28-201ENST00000507778 KLC2Q9H0B6 622 aa4.91□□□□□ -1.62
HMGB1P28-201ENST00000507778 VSX1Q9NZR4 365 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P28-201ENST00000507778 HDAC9Q9UKV0 1011 aa4.91□□□□□ -1.62
HMGB1P28-201ENST00000507778 FPGT-TNNI3KV9GXZ4 949 aa4.91□□□□□ -1.62
HMGB1P28-201ENST00000507778 ADAMTS20P59510 1910 aa4.9□□□□□ -1.62
HMGB1P28-201ENST00000507778 E7ENX8 843 aa4.9□□□□□ -1.63
HMGB1P28-201ENST00000507778 RNASET2O00584 256 aaKnown RBP4.9□□□□□ -1.63
HMGB1P28-201ENST00000507778 MUSKO15146 869 aa4.9□□□□□ -1.63
HMGB1P28-201ENST00000507778 ATXN1LP0C7T5 689 aaKnown RBP4.9□□□□□ -1.63
HMGB1P28-201ENST00000507778 IL1R1P14778 569 aa4.9□□□□□ -1.63
HMGB1P28-201ENST00000507778 KCNA2P16389 499 aa4.9□□□□□ -1.63
HMGB1P28-201ENST00000507778 CHRM3P20309 590 aa4.9□□□□□ -1.63
HMGB1P28-201ENST00000507778 PPM1AP35813 382 aa4.9□□□□□ -1.63
HMGB1P28-201ENST00000507778 CARSP49589 748 aaKnown RBP4.9□□□□□ -1.63
HMGB1P28-201ENST00000507778 MAPK10P53779 464 aa4.9□□□□□ -1.63
HMGB1P28-201ENST00000507778 CTSWP56202 376 aa4.9□□□□□ -1.63
HMGB1P28-201ENST00000507778 SATB1Q01826 763 aa4.9□□□□□ -1.63
HMGB1P28-201ENST00000507778 TAP2Q03519 686 aa4.9□□□□□ -1.63
HMGB1P28-201ENST00000507778 TOB2Q14106 344 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P28-201ENST00000507778 BOP1Q14137 746 aaKnown RBP4.9□□□□□ -1.63
HMGB1P28-201ENST00000507778 GRAMD1BQ3KR37 738 aa4.9□□□□□ -1.63
HMGB1P28-201ENST00000507778 SPDYE7PQ495Y7 208 aa4.9□□□□□ -1.63
HMGB1P28-201ENST00000507778 FAM83BQ5T0W9 1011 aa4.9□□□□□ -1.63
HMGB1P28-201ENST00000507778 TAF2Q6P1X5 1199 aa4.9□□□□□ -1.63
HMGB1P28-201ENST00000507778 LAYNQ6UX15 382 aa4.9□□□□□ -1.63
HMGB1P28-201ENST00000507778 ZDHHC24Q6UX98 284 aa4.9□□□□□ -1.63
HMGB1P28-201ENST00000507778 CLNKQ7Z7G1 428 aa4.9□□□□□ -1.63
HMGB1P28-201ENST00000507778 GAS2L3Q86XJ1 694 aa4.9□□□□□ -1.63
HMGB1P28-201ENST00000507778 SYTL1Q8IYJ3 562 aa4.9□□□□□ -1.63
HMGB1P28-201ENST00000507778 TXLNBQ8N3L3 684 aa4.9□□□□□ -1.63
HMGB1P28-201ENST00000507778 TMEM132CQ8N3T6 1108 aa4.9□□□□□ -1.63
HMGB1P28-201ENST00000507778 RAPGEF4Q8WZA2 1011 aa4.9□□□□□ -1.63
HMGB1P28-201ENST00000507778 C8orf49Q96NF6 230 aa4.9□□□□□ -1.63
HMGB1P28-201ENST00000507778 SLC46A2Q9BY10 475 aa4.9□□□□□ -1.63
HMGB1P28-201ENST00000507778 WDR12Q9GZL7 423 aaKnown RBP4.9□□□□□ -1.63
HMGB1P28-201ENST00000507778 GJB4Q9NTQ9 266 aa4.9□□□□□ -1.63
HMGB1P28-201ENST00000507778 TBC1D23Q9NUY8 699 aa4.9□□□□□ -1.63
HMGB1P28-201ENST00000507778 SMPD4Q9NXE4 827 aa4.9□□□□□ -1.63
HMGB1P28-201ENST00000507778 CTTNBP2NLQ9P2B4 639 aa4.9□□□□□ -1.63
HMGB1P28-201ENST00000507778 MYO1AQ9UBC5 1043 aa4.9□□□□□ -1.63
HMGB1P28-201ENST00000507778 ZNF212Q9UDV6 495 aa4.9□□□□□ -1.63
HMGB1P28-201ENST00000507778 RGS17Q9UGC6 210 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P28-201ENST00000507778 KCNE5Q9UJ90 142 aa4.9□□□□□ -1.63
HMGB1P28-201ENST00000507778 PCDHGB2Q9Y5G2 931 aa4.9□□□□□ -1.63
HMGB1P28-201ENST00000507778 LOC102723971A0A1B0GUV8 181 aa4.89□□□□□ -1.63
HMGB1P28-201ENST00000507778 GAGE12BA1L429 117 aa4.89□□□□□ -1.63
HMGB1P28-201ENST00000507778 GAGE12HA6NDE8 117 aa4.89□□□□□ -1.63
HMGB1P28-201ENST00000507778 TOR1BO14657 336 aa4.89□□□□□ -1.63
HMGB1P28-201ENST00000507778 AREL1O15033 823 aa4.89□□□□□ -1.63
HMGB1P28-201ENST00000507778 DCLK1O15075 740 aa4.89□□□□□ -1.63
HMGB1P28-201ENST00000507778 FAM20BO75063 409 aa4.89□□□□□ -1.63
HMGB1P28-201ENST00000507778 SUN1O94901 812 aa4.89□□□□□ -1.63
HMGB1P28-201ENST00000507778 INMTO95050 263 aa4.89□□□□□ -1.63
HMGB1P28-201ENST00000507778 CFIP05156 583 aa4.89□□□□□ -1.63
HMGB1P28-201ENST00000507778 HLA-DOAP06340 250 aa4.89□□□□□ -1.63
HMGB1P28-201ENST00000507778 ELANEP08246 267 aa4.89□□□□□ -1.63
HMGB1P28-201ENST00000507778 IL1R2P27930 398 aa4.89□□□□□ -1.63
HMGB1P28-201ENST00000507778 TECP42680 631 aa4.89□□□□□ -1.63
HMGB1P28-201ENST00000507778 GCLCP48506 637 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P28-201ENST00000507778 HSPA7P48741 367 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms